Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680577
Identifier: 37680577
GI number: 37680577
Start: 2428410
End: 2429336
Strand: Direct
Name: 37680577
Synonym: VV2393
Alternate gene names: NA
Gene position: 2428410-2429336 (Clockwise)
Preceding gene: 37680576
Following gene: 37680579
Centisome position: 72.39
GC content: 48.76
Gene sequence:
>927_bases ATGCGATCAACTATTTCTCTTCTTCTGGCGTCAATGATGCTGAGCGGCTGTGCTAACCAAGCGCTCACAAGCGACCCACT AAGCTTCTACGACTATCAGCTTTACTCGCCAGAAGGTACTGCCCTTTCACTGCAACAATTACCTCAATCGGTTCAAAATG CGGATGTCATTTTAATTGGCGAATGGCACACGCACGCGGGTGTTCATCGCTTCCAAACCGACCTGCTCAAAACGCTCAGT ACACAACACCGCGTCGCTCTGTCTATGGAACAATTTACCCGCGATAAACAAACCATCGTGAACCAATATTTGGCGGGCGA GATTGGTGAGCAAGTGCTTATCCAACAAGGCAATGCGTGGCCAAACTACGAAAGTGATTACCGACCTTTGATTGAGCTGG CCAAATCCCAACAGATGGATGTGATTGCCGCGAATGCACCGAAAAGCACCGTACGTTGCGTTGGCCGCCAAGGTTTGGCT TACCTCGATAAACTAACCCAAGAGGAGCGTGGCTATTTGGCGAGTGAAATCAACACCGGTGAAAGCGAATACAAAAGCAA ATTCATGGCGTCGATGCACCACGGCAAACCAGAGCAAACCGAGAAACAGTTTGCTGCTCAAGTGACTTGGGATGAAACCA TGGCCGAATCGATCGTCAACTACCGTCAGCAACACCCCAACACGCAAGTGATCCATGTCGCAGGAAAATTTCATATTGAA CAGGGCTTAGGCACCGCTCACTCGATTCTGCGTCGTGATCCCTCCTTAAAGGTGGTGGTGATCTCTCCGGTATCAACCAT CGATGAGCAAGGCAGCGATTACCAACTGCTGGTTCTGGAACCGCCGGTACGTTATGTGCAAAAAAGCAATCAAATGAAGG CGTTTCAGAATTTAAAAAAACGTAATGACGATCTGACCTGCAAATAG
Upstream 100 bases:
>100_bases AAATAGCCAGTCAAAACAATAAAGAGAATTATTCTCATTATTGTTGAAGTTCTAGACCGCCTCCATTACACTCTGCGACG TTTTTAATGGAGGCAGTATT
Downstream 100 bases:
>100_bases CGCGATTCTTTTCAACTTCCATCTCAGTTAGGCCTGTTTTTTGCTTGATTAAAAAAGCGGCAAAACAGGCTTTTTTTGCA CAAGTTTTCTCCAACGCCGC
Product: uncharacterized iron-regulated protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRSTISLLLASMMLSGCANQALTSDPLSFYDYQLYSPEGTALSLQQLPQSVQNADVILIGEWHTHAGVHRFQTDLLKTLS TQHRVALSMEQFTRDKQTIVNQYLAGEIGEQVLIQQGNAWPNYESDYRPLIELAKSQQMDVIAANAPKSTVRCVGRQGLA YLDKLTQEERGYLASEINTGESEYKSKFMASMHHGKPEQTEKQFAAQVTWDETMAESIVNYRQQHPNTQVIHVAGKFHIE QGLGTAHSILRRDPSLKVVVISPVSTIDEQGSDYQLLVLEPPVRYVQKSNQMKAFQNLKKRNDDLTCK
Sequences:
>Translated_308_residues MRSTISLLLASMMLSGCANQALTSDPLSFYDYQLYSPEGTALSLQQLPQSVQNADVILIGEWHTHAGVHRFQTDLLKTLS TQHRVALSMEQFTRDKQTIVNQYLAGEIGEQVLIQQGNAWPNYESDYRPLIELAKSQQMDVIAANAPKSTVRCVGRQGLA YLDKLTQEERGYLASEINTGESEYKSKFMASMHHGKPEQTEKQFAAQVTWDETMAESIVNYRQQHPNTQVIHVAGKFHIE QGLGTAHSILRRDPSLKVVVISPVSTIDEQGSDYQLLVLEPPVRYVQKSNQMKAFQNLKKRNDDLTCK >Mature_308_residues MRSTISLLLASMMLSGCANQALTSDPLSFYDYQLYSPEGTALSLQQLPQSVQNADVILIGEWHTHAGVHRFQTDLLKTLS TQHRVALSMEQFTRDKQTIVNQYLAGEIGEQVLIQQGNAWPNYESDYRPLIELAKSQQMDVIAANAPKSTVRCVGRQGLA YLDKLTQEERGYLASEINTGESEYKSKFMASMHHGKPEQTEKQFAAQVTWDETMAESIVNYRQQHPNTQVIHVAGKFHIE QGLGTAHSILRRDPSLKVVVISPVSTIDEQGSDYQLLVLEPPVRYVQKSNQMKAFQNLKKRNDDLTCK
Specific function: Unknown
COG id: COG3016
COG function: function code S; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34714; Mature: 34714
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTISLLLASMMLSGCANQALTSDPLSFYDYQLYSPEGTALSLQQLPQSVQNADVILIG CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEHHHHHHHHCCCCEEEEE EWHTHAGVHRFQTDLLKTLSTQHRVALSMEQFTRDKQTIVNQYLAGEIGEQVLIQQGNAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNYESDYRPLIELAKSQQMDVIAANAPKSTVRCVGRQGLAYLDKLTQEERGYLASEINTG CCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHCCCC ESEYKSKFMASMHHGKPEQTEKQFAAQVTWDETMAESIVNYRQQHPNTQVIHVAGKFHIE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECEEEHH QGLGTAHSILRRDPSLKVVVISPVSTIDEQGSDYQLLVLEPPVRYVQKSNQMKAFQNLKK HCCCHHHHHHHCCCCEEEEEECCHHHHHCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHH RNDDLTCK CCCCCCCC >Mature Secondary Structure MRSTISLLLASMMLSGCANQALTSDPLSFYDYQLYSPEGTALSLQQLPQSVQNADVILIG CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEHHHHHHHHCCCCEEEEE EWHTHAGVHRFQTDLLKTLSTQHRVALSMEQFTRDKQTIVNQYLAGEIGEQVLIQQGNAW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNYESDYRPLIELAKSQQMDVIAANAPKSTVRCVGRQGLAYLDKLTQEERGYLASEINTG CCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHCCCC ESEYKSKFMASMHHGKPEQTEKQFAAQVTWDETMAESIVNYRQQHPNTQVIHVAGKFHIE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECEEEHH QGLGTAHSILRRDPSLKVVVISPVSTIDEQGSDYQLLVLEPPVRYVQKSNQMKAFQNLKK HCCCHHHHHHHCCCCEEEEEECCHHHHHCCCCCEEEEEECCCHHHHHHCCHHHHHHHHHH RNDDLTCK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA