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The map label for this gene is sxy [H]

Identifier: 37680490

GI number: 37680490

Start: 2328110

End: 2328703

Strand: Direct

Name: sxy [H]

Synonym: VV2306

Alternate gene names: 37680490

Gene position: 2328110-2328703 (Clockwise)

Preceding gene: 37680489

Following gene: 37680491

Centisome position: 69.4

GC content: 45.12

Gene sequence:

>594_bases
ATGGATAAACCGATACTCAAAGATTCAATGAAGCTTTTTGAGCAACTTGGTGCGATAAAATCTCGCTCAATGTTTGGCGG
ATTCGGCCTTTTTGCAGATGAGACCATGTTCGCACTTGTGGTGAAAGACCAGCTTCATATTCGCGCAGATCAAAAATCAA
CATTACTTTTTGAAAAGCAAGGGCTCAAACCATACGTTTATACTAAGCGTGGGTTTCCTGTTGTCACTAAGTACTACGCG
ATTTCAGACGCGCTATGGCAAGACCAAAATGCACTACTCGCTTTAGCCAAACGTGCATTGGCCAGTGCTAATAACGATAA
ACAACAGCAAGCAACAGCAAAACCTGAACGATTAAAAGACCTGCCTAACCTGCGTTTAGCCACCGAACGAATGCTTAAAA
AGGCGGGAATTGAAACAGTCGAGCAGTTGGAGTCTCAAGGCGCGGTTCGTGCATACGAAGCGATTAAAAACACCCACAGT
GGTGCCGTGAGCTTAGAGCTGCTTTGGGCGTTAGAGGGAGCCATCAATGGTACGCACTGGAGTGTGATTCCTCAGCAACG
TCGAGACGAATTAGTGAATAAATTGTCTTTGTAG

Upstream 100 bases:

>100_bases
CAACAAGTTTACCCATTAATGACATTGTATTTGCATTGGTTTGCTAATCTCTCGGACCTGATTTGGTGGCGTAATAGTAA
TTACACCGAGATAACACATC

Downstream 100 bases:

>100_bases
ACAAGCACGTTTATTATTTCTTATAGATTAAAACCACATCAAAATGATGTGGTTTTTTTATATCGTTTGAAAGATTTTCT
GTCTCAATCAGGTCTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDKPILKDSMKLFEQLGAIKSRSMFGGFGLFADETMFALVVKDQLHIRADQKSTLLFEKQGLKPYVYTKRGFPVVTKYYA
ISDALWQDQNALLALAKRALASANNDKQQQATAKPERLKDLPNLRLATERMLKKAGIETVEQLESQGAVRAYEAIKNTHS
GAVSLELLWALEGAINGTHWSVIPQQRRDELVNKLSL

Sequences:

>Translated_197_residues
MDKPILKDSMKLFEQLGAIKSRSMFGGFGLFADETMFALVVKDQLHIRADQKSTLLFEKQGLKPYVYTKRGFPVVTKYYA
ISDALWQDQNALLALAKRALASANNDKQQQATAKPERLKDLPNLRLATERMLKKAGIETVEQLESQGAVRAYEAIKNTHS
GAVSLELLWALEGAINGTHWSVIPQQRRDELVNKLSL
>Mature_197_residues
MDKPILKDSMKLFEQLGAIKSRSMFGGFGLFADETMFALVVKDQLHIRADQKSTLLFEKQGLKPYVYTKRGFPVVTKYYA
ISDALWQDQNALLALAKRALASANNDKQQQATAKPERLKDLPNLRLATERMLKKAGIETVEQLESQGAVRAYEAIKNTHS
GAVSLELLWALEGAINGTHWSVIPQQRRDELVNKLSL

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae DNA transformation protein tfoX [H]

Homologues:

Organism=Escherichia coli, GI1787193, Length=183, Percent_Identity=36.0655737704918, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007077
- InterPro:   IPR007076 [H]

Pfam domain/function: PF04994 TfoX_C; PF04993 TfoX_N [H]

EC number: NA

Molecular weight: Translated: 22118; Mature: 22118

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPILKDSMKLFEQLGAIKSRSMFGGFGLFADETMFALVVKDQLHIRADQKSTLLFEKQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEHHHHEEECCCCHHEEEECC
GLKPYVYTKRGFPVVTKYYAISDALWQDQNALLALAKRALASANNDKQQQATAKPERLKD
CCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHC
LPNLRLATERMLKKAGIETVEQLESQGAVRAYEAIKNTHSGAVSLELLWALEGAINGTHW
CCCCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
SVIPQQRRDELVNKLSL
EECCHHHHHHHHHHHCC
>Mature Secondary Structure
MDKPILKDSMKLFEQLGAIKSRSMFGGFGLFADETMFALVVKDQLHIRADQKSTLLFEKQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEHHHHEEECCCCHHEEEECC
GLKPYVYTKRGFPVVTKYYAISDALWQDQNALLALAKRALASANNDKQQQATAKPERLKD
CCCCEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHC
LPNLRLATERMLKKAGIETVEQLESQGAVRAYEAIKNTHSGAVSLELLWALEGAINGTHW
CCCCHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEE
SVIPQQRRDELVNKLSL
EECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]