Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680450
Identifier: 37680450
GI number: 37680450
Start: 2285646
End: 2286140
Strand: Direct
Name: 37680450
Synonym: VV2266
Alternate gene names: NA
Gene position: 2285646-2286140 (Clockwise)
Preceding gene: 37680449
Following gene: 37680464
Centisome position: 68.14
GC content: 52.73
Gene sequence:
>495_bases GTGACCTCAATGGCCGCTGCGCCAAACATTCTTCCTCCAAACGAATGGCTTCCGTTCCTTTGGGGTGGTGAAGAAACGGC CCCTTTCCTCGACGGTGAACAACTCGAAAGCTATATCGATGCCATCGTGAATCTTTGGAATCAAGCTCGCCCAGCGTTGA TTGAGGGCACTTGGCAATGGCCAGAAGAGTGCGCGCTAGACGAAGCAGAGATTGTTAACGAAGCAACACGCGATTTCTGC GAAGGCCTGTTGCAAGGCTGGCAATTAGCCCGTGATGATTGGGAAACGCTGATGCCGGAACACAGCGAAGAAAACGCCTT GCTCGGCGGAGTGCTGCTGTCTCTGACCATGCTGTACGATCCAGAGACCACCATCGCAACATTAAGCGAGCAAGGTTTTG ACGGGTTGGATCAATTTGCTGAGATCTTCAATGCCATGCCAATGATGCTGTGTGGACTGACTCAGCGTGGCGTGATGCTG GCAGACGAACAGTAA
Upstream 100 bases:
>100_bases TTATTAGACCAGACGGTATTCTATTTTGAATTTACACAACATAATCGCTCTCCCTGAACTTGAAGGCAAACTGCTCAATC ACGCAAAAACTCAAGGTTTC
Downstream 100 bases:
>100_bases CGCTATCAATACCCTATAAAACAAAGACCCCAGCCAATAAGCTGGGGTCTTTGTTTTCGGCTGAAAAATTACGCCTTTCC ATTGCTTATAAGATCACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTSMAAAPNILPPNEWLPFLWGGEETAPFLDGEQLESYIDAIVNLWNQARPALIEGTWQWPEECALDEAEIVNEATRDFC EGLLQGWQLARDDWETLMPEHSEENALLGGVLLSLTMLYDPETTIATLSEQGFDGLDQFAEIFNAMPMMLCGLTQRGVML ADEQ
Sequences:
>Translated_164_residues MTSMAAAPNILPPNEWLPFLWGGEETAPFLDGEQLESYIDAIVNLWNQARPALIEGTWQWPEECALDEAEIVNEATRDFC EGLLQGWQLARDDWETLMPEHSEENALLGGVLLSLTMLYDPETTIATLSEQGFDGLDQFAEIFNAMPMMLCGLTQRGVML ADEQ >Mature_163_residues TSMAAAPNILPPNEWLPFLWGGEETAPFLDGEQLESYIDAIVNLWNQARPALIEGTWQWPEECALDEAEIVNEATRDFCE GLLQGWQLARDDWETLMPEHSEENALLGGVLLSLTMLYDPETTIATLSEQGFDGLDQFAEIFNAMPMMLCGLTQRGVMLA DEQ
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18368; Mature: 18237
Theoretical pI: Translated: 3.39; Mature: 3.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMAAAPNILPPNEWLPFLWGGEETAPFLDGEQLESYIDAIVNLWNQARPALIEGTWQW CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC PEECALDEAEIVNEATRDFCEGLLQGWQLARDDWETLMPEHSEENALLGGVLLSLTMLYD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PETTIATLSEQGFDGLDQFAEIFNAMPMMLCGLTQRGVMLADEQ CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCC >Mature Secondary Structure TSMAAAPNILPPNEWLPFLWGGEETAPFLDGEQLESYIDAIVNLWNQARPALIEGTWQW CCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC PEECALDEAEIVNEATRDFCEGLLQGWQLARDDWETLMPEHSEENALLGGVLLSLTMLYD HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PETTIATLSEQGFDGLDQFAEIFNAMPMMLCGLTQRGVMLADEQ CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA