Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37680348

Identifier: 37680348

GI number: 37680348

Start: 2174819

End: 2177686

Strand: Direct

Name: 37680348

Synonym: VV2164

Alternate gene names: NA

Gene position: 2174819-2177686 (Clockwise)

Preceding gene: 37680347

Following gene: 37680349

Centisome position: 64.83

GC content: 47.07

Gene sequence:

>2868_bases
TTGAAGACCTTTAATATGAACGATAAAACCTTAACACTAAAACTGCGGTTTAACGCTGAAAACAAAGAGTTCATTGGTCA
GGTAAAAAGCTCTGCGCATGCGGTAGGCGATCTAGGCACTAAATCAAACAACGCAAGCGCAGGCTTAAAGTCACTTTCAA
AAGAGTCGCAATCAGCAGGGGGCGATCTCTCCTCTCTCAAATCTCAGGTTCTTGGTTTAGCTGGCGGCTTTTCTGCATTA
GCCATTGCAATCAATGCAAAAGACACATTAGGCCAATACCAAGACATGCGCACACAAATTTCGGCGTTGGTGGGTGGTCA
AGAACAGTGGCTTCAAACTGAGCAATATCTCAATCAAGTTGCGCAGGAGCACAATAAAACCATTCTCGATATGGCTCAAA
GCTATGCTCGCCTCTCTGTGCTTCAAGAAGCGGGTTTGGTCACGCAGCGCGAAACTATGATGCTGTTTGAAGGCATGAGT
AATGCGCAAAGCCAATTAGGAGCATCCAGTGCTCAATTGGACCAAGCTATGTATGGTCTTTCTCAGGCACTGGCCTCCCC
GATTGTTCGTGCTGAAGAGTTAAATCAAGTCGTTGAACCGTTACCTGGTTTACTGAATAAGTTGGATAAAGCGGCAGGTC
TTACCGCAGGTGGCTTCCGACAGATGATGCTCGACGGTAAAGTGACCAGTGAATTTTTTAAGAGCACGTTAATTAAAGCG
TTAGGTGATTACGATGGTGCCGCAGCGCGAACAGTACAAAATATCAATGCACAACAAGCGGCGTTTTCTCGCGCTTATCA
AGAGATGGTCTTGGCGTTCGAAAAGCCGATTTCAACCGTATTTTCTAACTCTGTTTCGGCGAGCGTCTCCATTCTTGATA
CCTTCACTAACAACGCAAATCTCATTACTGATTTAGTCGGTGGTGCGATGGTGGTAGCGCTTGGTCGTGGTTCTGTTGCG
GTAGCTAATTTGACCAGAGAAAAAGCAAAAGACATTGCCACGACAGTGCAAGGCATCCAAGTCGAAAGGCAAAAACAGGC
ATCAGAACTGGCTTCTATCCAAGCAGAGATACGTCATCTTGAAGTTATGCGTTTGACCAACAATCAACGCTTTATGGCGA
CAGGTGCAGCAAATACTCTCGCAGCAGCAGAGGCGAGAGAAAAAGTCGTTAAGGATGCGCTTGTAGCATCTCAGGCTAGG
CTCAACGTCACAATGAGAGCAGGTACCGCTCTGATGGGGGTACTAGGTGGCCCTGCGGGTATCGCGGTCATGGCGGCGAG
TGCTTTGGGTTATTACGCGTTAAGCGCTAAAGGGGCTGAGCAAGACACAGAAAGGCTCAAAGAGCAAGTAAACGCTTTAC
TTGGTAAAATGAATGCTGTGGAAGCTTCACAACTAGAAAAAGCCATCACAGAACAAACAAAGATGGTGGCTAAGCTACGT
GGAGAATACGCAAAAATCGCATTGACTCCAGCACCTGGACAAACCCTTTGGCAACGATTGACCGAAAACAATGGTGAGAT
GCGAGAGCGTCAGATCCAAGAGGCAAGAGAAACGGCATCATTGGTCACCTCTGTTCAGCGTGAATTGTCCGAAGCAGAGC
AAAATCTTTCTGAACTCCAGCAAAAGCTGATCCGTTTGCGTCGTGGTGAAGAGTCCAATACCCCTATAACTCCGCCAGGG
TTCACTCCACCTTCGAGCCAAGACGATGCTATTAAAGTTGGCGAGAGAATGCTAAAGAACCTCGCTAAGCAGGCTGCGCT
GTATGGCAACACCTCGGAAGTGGCCCGCGTTCGTTACGAAATCGAAAAAGGTTCATTGCAAGGCATTAACGACCAGCTCA
AAGAGCAGTTGTTGTTGCAAGCAAAAATCATCGACCAAAAACGCGCGGAAGCGGAAAAGGTTAAGGCAGAGAAGAAAACC
GACAAGATTGACGACTTCTTTTCCTCATCTGATGAGCTAAATAACGAATTTCTGATGCGCTTGGCCATTCAAGCGGACTA
CGAGAACAAAGCTAAGATTCAAGAGCAATACGCCTACGCAGAGCGTCAAGAACAGCTTCAAGCGCAATTTAATGCGGCTT
ATGAGCAGGCGCGAGGCAATCAGGAATTGATGCATGCGCTTGAGAGTGAGTATTTCCAGAATCGTCAAATCCTGCGCCAA
GCACACGAAATGAACCTAACGGAAATCACTCGTCAGGAAGAAGAAAAGCGCCGCGCCATGATGCTGCAAAATGTGGGCTT
TGCTTTGAACTCTGGGGCGCAAATGTTTGATGGCTTTGCGGCACTGGCCAAAACCTATAAGGGCGAGCAGTCAAACACCT
ATCGCACCCTTTATTCAATCAGCAAAGGCTTTGCGGTTGCTCAAGCTGGCTTGAACCTTTGGATGGCTATTTCTAACGCA
TCTGCCGTTCAGCCTTGGTATGCGTCAGCGGCGGCTATTGCATCGGCTACAGCGCAAGGTGCTGGCATTCTCGCAAGCCT
TAAAGGGTCGAGTTATCAAGGACAAGCCCACGATGGTATTGACCGAGTGCCTAAGTCAAATGAAGGTACTTGGCTATTGA
AAGCAGATGAGATGGTCCTAAACCCCTCTCAAGCAGACAATTTCCGTTGGATGGTTGACGCTATGCGCACAATGAAAAGT
GCAGTATCGAGTGCCACAGGTCATTCCTCAGTAGCAACAGGTTTAAAAAGTATTAATGTCAATGTACATGGTGTTGAGCG
CGGACAAGTACAGTCTTTTGCTTCAGAGAGTGACAGTGAGATAAACATTGATGTCATCATTAATAAAGCAGTTAATCGCT
CTTTAGAGGCAGTTTATTCTGACTTTGATAATGGTGGTCCAATATCAATGCGTTCGAAGTCGGCTTAA

Upstream 100 bases:

>100_bases
CCGCGGTGAAGGCTTATCAGCAAGCTTCTAATGGATTTGCAGCAATCGATGAACAGCCGTAATGGTCGCTTTAATAGCTC
TCCATCCTTATGACTAATAA

Downstream 100 bases:

>100_bases
TCTAGCTTTAGTCAAAGGATGAATGTCAAGAGCGTTGAGGTGGTTTCATTGACATACTGTCTAATCATGACTTCCTCAGC
TTGTTCTTATCTTTACAAGG

Product: phage-related minor tail protein

Products: NA

Alternate protein names: Bacteriophage Protein; Phage Tape Measure Protein

Number of amino acids: Translated: 955; Mature: 955

Protein sequence:

>955_residues
MKTFNMNDKTLTLKLRFNAENKEFIGQVKSSAHAVGDLGTKSNNASAGLKSLSKESQSAGGDLSSLKSQVLGLAGGFSAL
AIAINAKDTLGQYQDMRTQISALVGGQEQWLQTEQYLNQVAQEHNKTILDMAQSYARLSVLQEAGLVTQRETMMLFEGMS
NAQSQLGASSAQLDQAMYGLSQALASPIVRAEELNQVVEPLPGLLNKLDKAAGLTAGGFRQMMLDGKVTSEFFKSTLIKA
LGDYDGAAARTVQNINAQQAAFSRAYQEMVLAFEKPISTVFSNSVSASVSILDTFTNNANLITDLVGGAMVVALGRGSVA
VANLTREKAKDIATTVQGIQVERQKQASELASIQAEIRHLEVMRLTNNQRFMATGAANTLAAAEAREKVVKDALVASQAR
LNVTMRAGTALMGVLGGPAGIAVMAASALGYYALSAKGAEQDTERLKEQVNALLGKMNAVEASQLEKAITEQTKMVAKLR
GEYAKIALTPAPGQTLWQRLTENNGEMRERQIQEARETASLVTSVQRELSEAEQNLSELQQKLIRLRRGEESNTPITPPG
FTPPSSQDDAIKVGERMLKNLAKQAALYGNTSEVARVRYEIEKGSLQGINDQLKEQLLLQAKIIDQKRAEAEKVKAEKKT
DKIDDFFSSSDELNNEFLMRLAIQADYENKAKIQEQYAYAERQEQLQAQFNAAYEQARGNQELMHALESEYFQNRQILRQ
AHEMNLTEITRQEEEKRRAMMLQNVGFALNSGAQMFDGFAALAKTYKGEQSNTYRTLYSISKGFAVAQAGLNLWMAISNA
SAVQPWYASAAAIASATAQGAGILASLKGSSYQGQAHDGIDRVPKSNEGTWLLKADEMVLNPSQADNFRWMVDAMRTMKS
AVSSATGHSSVATGLKSINVNVHGVERGQVQSFASESDSEINIDVIINKAVNRSLEAVYSDFDNGGPISMRSKSA

Sequences:

>Translated_955_residues
MKTFNMNDKTLTLKLRFNAENKEFIGQVKSSAHAVGDLGTKSNNASAGLKSLSKESQSAGGDLSSLKSQVLGLAGGFSAL
AIAINAKDTLGQYQDMRTQISALVGGQEQWLQTEQYLNQVAQEHNKTILDMAQSYARLSVLQEAGLVTQRETMMLFEGMS
NAQSQLGASSAQLDQAMYGLSQALASPIVRAEELNQVVEPLPGLLNKLDKAAGLTAGGFRQMMLDGKVTSEFFKSTLIKA
LGDYDGAAARTVQNINAQQAAFSRAYQEMVLAFEKPISTVFSNSVSASVSILDTFTNNANLITDLVGGAMVVALGRGSVA
VANLTREKAKDIATTVQGIQVERQKQASELASIQAEIRHLEVMRLTNNQRFMATGAANTLAAAEAREKVVKDALVASQAR
LNVTMRAGTALMGVLGGPAGIAVMAASALGYYALSAKGAEQDTERLKEQVNALLGKMNAVEASQLEKAITEQTKMVAKLR
GEYAKIALTPAPGQTLWQRLTENNGEMRERQIQEARETASLVTSVQRELSEAEQNLSELQQKLIRLRRGEESNTPITPPG
FTPPSSQDDAIKVGERMLKNLAKQAALYGNTSEVARVRYEIEKGSLQGINDQLKEQLLLQAKIIDQKRAEAEKVKAEKKT
DKIDDFFSSSDELNNEFLMRLAIQADYENKAKIQEQYAYAERQEQLQAQFNAAYEQARGNQELMHALESEYFQNRQILRQ
AHEMNLTEITRQEEEKRRAMMLQNVGFALNSGAQMFDGFAALAKTYKGEQSNTYRTLYSISKGFAVAQAGLNLWMAISNA
SAVQPWYASAAAIASATAQGAGILASLKGSSYQGQAHDGIDRVPKSNEGTWLLKADEMVLNPSQADNFRWMVDAMRTMKS
AVSSATGHSSVATGLKSINVNVHGVERGQVQSFASESDSEINIDVIINKAVNRSLEAVYSDFDNGGPISMRSKSA
>Mature_955_residues
MKTFNMNDKTLTLKLRFNAENKEFIGQVKSSAHAVGDLGTKSNNASAGLKSLSKESQSAGGDLSSLKSQVLGLAGGFSAL
AIAINAKDTLGQYQDMRTQISALVGGQEQWLQTEQYLNQVAQEHNKTILDMAQSYARLSVLQEAGLVTQRETMMLFEGMS
NAQSQLGASSAQLDQAMYGLSQALASPIVRAEELNQVVEPLPGLLNKLDKAAGLTAGGFRQMMLDGKVTSEFFKSTLIKA
LGDYDGAAARTVQNINAQQAAFSRAYQEMVLAFEKPISTVFSNSVSASVSILDTFTNNANLITDLVGGAMVVALGRGSVA
VANLTREKAKDIATTVQGIQVERQKQASELASIQAEIRHLEVMRLTNNQRFMATGAANTLAAAEAREKVVKDALVASQAR
LNVTMRAGTALMGVLGGPAGIAVMAASALGYYALSAKGAEQDTERLKEQVNALLGKMNAVEASQLEKAITEQTKMVAKLR
GEYAKIALTPAPGQTLWQRLTENNGEMRERQIQEARETASLVTSVQRELSEAEQNLSELQQKLIRLRRGEESNTPITPPG
FTPPSSQDDAIKVGERMLKNLAKQAALYGNTSEVARVRYEIEKGSLQGINDQLKEQLLLQAKIIDQKRAEAEKVKAEKKT
DKIDDFFSSSDELNNEFLMRLAIQADYENKAKIQEQYAYAERQEQLQAQFNAAYEQARGNQELMHALESEYFQNRQILRQ
AHEMNLTEITRQEEEKRRAMMLQNVGFALNSGAQMFDGFAALAKTYKGEQSNTYRTLYSISKGFAVAQAGLNLWMAISNA
SAVQPWYASAAAIASATAQGAGILASLKGSSYQGQAHDGIDRVPKSNEGTWLLKADEMVLNPSQADNFRWMVDAMRTMKS
AVSSATGHSSVATGLKSINVNVHGVERGQVQSFASESDSEINIDVIINKAVNRSLEAVYSDFDNGGPISMRSKSA

Specific function: Unknown

COG id: COG5281

COG function: function code S; Phage-related minor tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 103760; Mature: 103760

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFNMNDKTLTLKLRFNAENKEFIGQVKSSAHAVGDLGTKSNNASAGLKSLSKESQSAG
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
GDLSSLKSQVLGLAGGFSALAIAINAKDTLGQYQDMRTQISALVGGQEQWLQTEQYLNQV
CCHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQEHNKTILDMAQSYARLSVLQEAGLVTQRETMMLFEGMSNAQSQLGASSAQLDQAMYGL
HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH
SQALASPIVRAEELNQVVEPLPGLLNKLDKAAGLTAGGFRQMMLDGKVTSEFFKSTLIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
LGDYDGAAARTVQNINAQQAAFSRAYQEMVLAFEKPISTVFSNSVSASVSILDTFTNNAN
HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
LITDLVGGAMVVALGRGSVAVANLTREKAKDIATTVQGIQVERQKQASELASIQAEIRHL
HHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMRLTNNQRFMATGAANTLAAAEAREKVVKDALVASQARLNVTMRAGTALMGVLGGPAG
HHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCCHH
IAVMAASALGYYALSAKGAEQDTERLKEQVNALLGKMNAVEASQLEKAITEQTKMVAKLR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GEYAKIALTPAPGQTLWQRLTENNGEMRERQIQEARETASLVTSVQRELSEAEQNLSELQ
CCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIRLRRGEESNTPITPPGFTPPSSQDDAIKVGERMLKNLAKQAALYGNTSEVARVRYE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IEKGSLQGINDQLKEQLLLQAKIIDQKRAEAEKVKAEKKTDKIDDFFSSSDELNNEFLMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHH
LAIQADYENKAKIQEQYAYAERQEQLQAQFNAAYEQARGNQELMHALESEYFQNRQILRQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHEMNLTEITRQEEEKRRAMMLQNVGFALNSGAQMFDGFAALAKTYKGEQSNTYRTLYSI
HHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SKGFAVAQAGLNLWMAISNASAVQPWYASAAAIASATAQGAGILASLKGSSYQGQAHDGI
HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCH
DRVPKSNEGTWLLKADEMVLNPSQADNFRWMVDAMRTMKSAVSSATGHSSVATGLKSINV
HHCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCE
NVHGVERGQVQSFASESDSEINIDVIINKAVNRSLEAVYSDFDNGGPISMRSKSA
EEEECCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTFNMNDKTLTLKLRFNAENKEFIGQVKSSAHAVGDLGTKSNNASAGLKSLSKESQSAG
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
GDLSSLKSQVLGLAGGFSALAIAINAKDTLGQYQDMRTQISALVGGQEQWLQTEQYLNQV
CCHHHHHHHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AQEHNKTILDMAQSYARLSVLQEAGLVTQRETMMLFEGMSNAQSQLGASSAQLDQAMYGL
HHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH
SQALASPIVRAEELNQVVEPLPGLLNKLDKAAGLTAGGFRQMMLDGKVTSEFFKSTLIKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHH
LGDYDGAAARTVQNINAQQAAFSRAYQEMVLAFEKPISTVFSNSVSASVSILDTFTNNAN
HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
LITDLVGGAMVVALGRGSVAVANLTREKAKDIATTVQGIQVERQKQASELASIQAEIRHL
HHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMRLTNNQRFMATGAANTLAAAEAREKVVKDALVASQARLNVTMRAGTALMGVLGGPAG
HHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCCCHH
IAVMAASALGYYALSAKGAEQDTERLKEQVNALLGKMNAVEASQLEKAITEQTKMVAKLR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
GEYAKIALTPAPGQTLWQRLTENNGEMRERQIQEARETASLVTSVQRELSEAEQNLSELQ
CCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIRLRRGEESNTPITPPGFTPPSSQDDAIKVGERMLKNLAKQAALYGNTSEVARVRYE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
IEKGSLQGINDQLKEQLLLQAKIIDQKRAEAEKVKAEKKTDKIDDFFSSSDELNNEFLMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHH
LAIQADYENKAKIQEQYAYAERQEQLQAQFNAAYEQARGNQELMHALESEYFQNRQILRQ
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AHEMNLTEITRQEEEKRRAMMLQNVGFALNSGAQMFDGFAALAKTYKGEQSNTYRTLYSI
HHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SKGFAVAQAGLNLWMAISNASAVQPWYASAAAIASATAQGAGILASLKGSSYQGQAHDGI
HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCH
DRVPKSNEGTWLLKADEMVLNPSQADNFRWMVDAMRTMKSAVSSATGHSSVATGLKSINV
HHCCCCCCCEEEEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCE
NVHGVERGQVQSFASESDSEINIDVIINKAVNRSLEAVYSDFDNGGPISMRSKSA
EEEECCCHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA