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The map label for this gene is yjjU [H]

Identifier: 37680240

GI number: 37680240

Start: 2056815

End: 2057681

Strand: Direct

Name: yjjU [H]

Synonym: VV2056

Alternate gene names: 37680240

Gene position: 2056815-2057681 (Clockwise)

Preceding gene: 37680239

Following gene: 37680242

Centisome position: 61.32

GC content: 49.48

Gene sequence:

>867_bases
ATGAAAGCACTGGTCGTGGAAGGGGGTGCAATGCGCGGCGTATTTGCCAGCGGCGTATTGGACGCATTTTTGCAGCAAAA
TTATCAACCTTTTGATCTGGCTATTGGGGTGTCGGCAGGCGCATCCAATTTGGTTGGCTATTTGGCGAACGCTCAAGGGC
GCAGTTTTAATGTCATCACTAAATTGGCCACATCTCAGCGTTTTTATAACCCAAAACGCTTTATCAAAGGGGGCGATTTG
GTGGACGTAAAATGGTTGGTTGACGAATCCATGCGTCGCTACCCCATTGAGGCAGAACGTCTCTTTACAAACACGCGTTT
GCTGGCAACCACCACTGACATTGCAACAGGGTTGCCACGCTATCAACAGCTAACCAAGCAGAATGTGAATCAATTATTGG
AAGCGAGCTGTGCCTTGCCTATTGCTTATCGCCAACCACCTTGCTTTGCAGGCAGTTGTTTTACCGATGGCGGGGTCTCG
GATTCCATTCCTGTGAAAGAAGCGTATCGCCAAGGCGCTCGTGACATAACGGTTGTGTTGTCGCACCCATTGAGCTACGA
GATGCCAGAAAGTCGCCACACTTGGCTCACCAACACCTTGTTGTCACGTCAACCCGCTATCGCTAAAGCGCTGCGTCAAC
GAGCCCAAAATTACAATGCGGCATTGGCGTTTATTCGCTTCCCACCAGCCGGTGCCACTATCAGAGTGATTGCGCCAGAA
GAAGGTTTTAAGGTGAAACGGTTAACGATGAATCAACGCAAACTTCATCAAGGCTATCAAATGGGTATTACACAGGGAAA
GCAGCATTTAGCAAGGTTGAACGGCACTGATGGGCTGACGCGCGAAAACTGCCCTTTTTGCGTTTAA

Upstream 100 bases:

>100_bases
ATAGACGCCTCCTATTTCAACGATAAACACAACCGACTACGACATCCCTTCCGGTTGTTTTAGCCTTGCAGACTAGAGTG
AATCTAAACGGTAAAGAAAG

Downstream 100 bases:

>100_bases
AAAGGACATTTTCCGCGCAACGAGATCCGACCACGTAACAAAAGTGTCACCGACTTCAAATTACTCAACAATAGCTTGTT
TCAAAGATGATAATTTACAT

Product: esterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKALVVEGGAMRGVFASGVLDAFLQQNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPRYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPAGATIRVIAPE
EGFKVKRLTMNQRKLHQGYQMGITQGKQHLARLNGTDGLTRENCPFCV

Sequences:

>Translated_288_residues
MKALVVEGGAMRGVFASGVLDAFLQQNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPRYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPAGATIRVIAPE
EGFKVKRLTMNQRKLHQGYQMGITQGKQHLARLNGTDGLTRENCPFCV
>Mature_288_residues
MKALVVEGGAMRGVFASGVLDAFLQQNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVITKLATSQRFYNPKRFIKGGDL
VDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPRYQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVS
DSIPVKEAYRQGARDITVVLSHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPAGATIRVIAPE
EGFKVKRLTMNQRKLHQGYQMGITQGKQHLARLNGTDGLTRENCPFCV

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=279, Percent_Identity=35.84229390681, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31886; Mature: 31886

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVVEGGAMRGVFASGVLDAFLQQNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVIT
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHH
KLATSQRFYNPKRFIKGGDLVDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPR
HHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHCCEEEEEEHHHHHCCHH
YQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVSDSIPVKEAYRQGARDITVVL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
SHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPAGATIRVIAPE
ECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCC
EGFKVKRLTMNQRKLHQGYQMGITQGKQHLARLNGTDGLTRENCPFCV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKALVVEGGAMRGVFASGVLDAFLQQNYQPFDLAIGVSAGASNLVGYLANAQGRSFNVIT
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHH
KLATSQRFYNPKRFIKGGDLVDVKWLVDESMRRYPIEAERLFTNTRLLATTTDIATGLPR
HHHHHHHHCCHHHHCCCCCEEEEHHHHHHHHHHCCCHHHHHHHCCEEEEEEHHHHHCCHH
YQQLTKQNVNQLLEASCALPIAYRQPPCFAGSCFTDGGVSDSIPVKEAYRQGARDITVVL
HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEE
SHPLSYEMPESRHTWLTNTLLSRQPAIAKALRQRAQNYNAALAFIRFPPAGATIRVIAPE
ECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCC
EGFKVKRLTMNQRKLHQGYQMGITQGKQHLARLNGTDGLTRENCPFCV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]