Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37680198

Identifier: 37680198

GI number: 37680198

Start: 2010918

End: 2013827

Strand: Direct

Name: 37680198

Synonym: VV2014

Alternate gene names: NA

Gene position: 2010918-2013827 (Clockwise)

Preceding gene: 37680189

Following gene: 37680199

Centisome position: 59.95

GC content: 50.72

Gene sequence:

>2910_bases
GTGAAAATGCGCTTATTTGCCAAGAGTTTGGTTGCCTCAGCCATTGCGGGTCTATTGACCGCGTGTGGTGGTGGCGACGG
TGGCGGTTCCGCGACCAGTCCAGCAACCCCTTCAACCCCAACTAAAGTAACGTTAACCGGCTTTGTCACGGAGTCTCAGC
CAGTGAAAGTCACGGTCGATCAAACCGTCAAAACGGAAGTGAGACTGCTGGTGGGTGAAGAGGTCGTGGCGCGTTCAGCG
ATCAAAATACACGCGGGAGAGCGTCAACCTCGCTATCTTTTAGAGGTGGATCCTGCCACTCTCGGCGAGGGGCTCCCAAT
GACGATTGAGGCAGTCAGCGTGATCTCCCCACGTGAACAAGAGGCCAACGCGCGCACTGCTGAAAAAGCACAAACGGAAG
ATCAAGCGTCATCAGAAACTCGTGAAGTGTTGCTTTATCGCAATGCCATTGGCACCAAGTTGCCGCTACTCGCCGCAGAT
AAAAACAACGATAAATTCATTACCCATGATGAATGGCTGCCACTGACTTTCTCGCAAACCAACTCGTTGTTTGTTGCACT
CGATCCAAGTGGCGAACAAAGTGCACTTGAACTGATGAACGAACATGGGCGAGAGAGAATCATGGCCATCGCCGCGTTGC
TGCATGCGATCGCCGATCCTTTTGATCGCGAAGAACAAATCGAACTCACCTCGCTCAATCTCTCGACCGCTGCCTTAATT
GATGCCCTGCTTAAGAATGAAAACATGGCCGCTGCCACAACCGAGGAAGAGACGCCTTGGTTGGATAGAGTGAGCAACAC
TTACCAAGCGATGGCACAAACCCATCAAGTGGCACTACCCGACGGTTGGCAGAAGCGTATTAAAGACAAATGGATCGAGA
TGCACGCGGTCAAGCAAAGCAATGTACTGCGCGAAGTATTAGATAACTCTTACCCAACCCGCACCTTGGTACTCCGTGGC
GAAACGGTTTCAGGAATGAAGAACCCGCAGATTTCGCTACAAATGGGTTCTTATCCTAACGATCCTTTAGCAAACAGCCA
TTACGACAACCCACTCAAACCCAAACGCCCATTGCTGGTACCAATTACCCCTGTGGGTGAAGAAAAATCGTCGACGGCTA
TTGAAGGGGCAAATCGTCAATTTGAGTTCCGCGTAACGCTTCGCGATACCGCGCAAGGCTTTGAAACTTGTCAGCCCACG
GCGAACGGCGTGTATGTTTACTACGATAAAAACGCCGATCTGACCAAGCCAAGCGCCCATCCGACCGACAATATGCAAGA
TTTGCTGACCGTGATTGCGTTTGATCCAGACAGCGGTGTCGAGATGCGTTCCTACTTGGGCGCCTTCTGTGAACTGGCGA
GAGCTGATATCGACAAGAACCAAGATGGCATCGTCACTGCCGAAGAGTTTCCGCGTTTAAAAGTCTCATTTGAAAACAAC
GCACACGCCCTGTTGGCTGAACGCAGTGGCTTGATGCATCACGGTGGCGGCCAATATGCCAAACCCGTCAAACAGACCGC
GATCGATGAACTGTTTGCCAAGCATACGCCGGAAATGGTGCAGTTGATGAGTAGCATTGTGGCGATGCAAATGGCATCAG
CAGAAAATCAGGCACTACCGGCCATCGACAATGCCTCAGACTTTTTCCGCACCGCTGCTCAGTTGCTCGATCTCGACTAC
AACGCTCAGTACCGTATGTACAGTAAAAGCAACATTCTGCCTGAGCCGTTTCAAGTCATCCAACTGCTGAAAAACATCGC
CGATGTCGCCCATCATATGGAAGATAACGAGGCCACCATCAACACGCTGTTGACGTGGAGTGCGCAAGCTTTCACTCACC
TTAGCCAATTTGCTGCGGACAACCAGATCGCTGCCGACTTAAACACGGCAATCAACGCTGGTAATAGTTGGCTACCCGCC
GAGCCAGTGAATGGATTGGAGTCGATTTGCAGCACCGAATTTGCCGAAGACCAAATTCGTGGCATTGCACTTCGTGGACG
TGGGGACGATTGGCTCACATTAGAATGGCTGCCGCAAGGAACCAGTGGCTATACCGTCTACTGGGACACCAAGCCGTTTA
GTCAACTGAGTGAAGCGACCAATCAGACTAAGAGCGCAACGCACAGAGTGACATTAAATGGTTTAACGCCGTTTACTCGC
TACTATTTCCAGATCGCGCACGATGGCACGCCGAGCGCTCAGTTCAATGTTCGAGTTAGCGATGCTGGCCTAACCAATCC
TCATCTCTTTGATTCGGATTTTAGCTGTGACCCCATGAGTGGTTATGCACGAAACTCCAACATCGATGGTTACCAATCGC
TTTCTTTCCTAAAAGTGGATGCGCAAGGTGAACGTTTGAGTCGACAAGATCTTCCGTATGTTGCAACCCCTCACAGCTGC
GCAGTTGAAACCAAAACTGGCCGAACGTGGGCCGTGCCAAATAGCGAGATGGTGGAAGGTGATCGCATTCGTCACTGGTA
CAGCATCGATAACCGATATCTGCATGGTGACAACCTGGCGGTGACAGACGACCAATACAACGGATTTTGTGTCGCCACCA
ACGGTGAGGTTTATCGCCAAGACAAAGCGCGCCACTGCACGGTAAACCAACTTGTTCAACGCGCCAATGAAGCCAAACTT
TGCGGCATCACCGATTGGAGGCTGCCGACCTACGAAGAAACGCTCAATATTATGACTTTGAAAGGCAAGCCTCAGTTGAA
CTTTGATGACGATTTCTTCCCGAATATTGACGAAAACAAGCTGTGGATGAAGCAAGAAAACCCTGATGTTAAAACCCAAG
CAAACCTACTTTTCCCAACCCGTTGGAACGCACGAACGCAATTAGAAGGCAAAGAGGTGCCTCACCAGGTGATGCTGGTG
AGCGATGGTTTAAAAGTGAATCAGGAATAA

Upstream 100 bases:

>100_bases
TTTTATTGTTAATCAGATCATTGATCTGATATGTAGAGTATTTATTCAAATCACGGCGTCATTTCCCTTCTCATCTATCG
AGCAAATTTTTCAATAAGGA

Downstream 100 bases:

>100_bases
GGACGCAAATATGAAAACGACTTTTCTCATCTCATTAGCAGCGGTACTCTCAACTCCGCTCTATGCGCAATGCCTTCCTG
AAGAGGGGCGTTTTGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 969; Mature: 969

Protein sequence:

>969_residues
MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA
IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD
KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI
DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG
ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT
ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN
AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY
NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA
EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR
YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC
AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL
CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV
SDGLKVNQE

Sequences:

>Translated_969_residues
MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA
IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD
KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI
DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG
ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT
ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN
AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY
NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA
EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR
YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC
AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL
CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV
SDGLKVNQE
>Mature_969_residues
MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA
IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD
KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI
DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG
ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT
ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN
AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY
NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA
EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR
YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC
AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL
CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV
SDGLKVNQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 107598; Mature: 107598

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1 ; PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEC
QTVKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQ
CHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHCCCCCCEEEEEEECCCCCHH
EANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQT
HCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECC
NSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH
DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQS
HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHH
NVLREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLV
HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
PITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAH
EECCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCC
PTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN
CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCC
AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALP
CEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
AIDNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
NTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIR
EHEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR
EEEEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHE
YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVD
EEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
AQGERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLA
CCCCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEE
VTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTL
EECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEE
KGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCEEEEEE
SDGLKVNQE
ECCEECCCC
>Mature Secondary Structure
MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEC
QTVKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQ
CHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHCCCCCCEEEEEEECCCCCHH
EANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQT
HCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECC
NSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH
DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQS
HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHH
NVLREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLV
HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
PITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAH
EECCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCC
PTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN
CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCC
AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALP
CEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
AIDNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATI
CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
NTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIR
EHEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
GIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR
EEEEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHE
YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVD
EEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
AQGERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLA
CCCCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEE
VTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTL
EECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEE
KGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCEEEEEE
SDGLKVNQE
ECCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA