Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680198
Identifier: 37680198
GI number: 37680198
Start: 2010918
End: 2013827
Strand: Direct
Name: 37680198
Synonym: VV2014
Alternate gene names: NA
Gene position: 2010918-2013827 (Clockwise)
Preceding gene: 37680189
Following gene: 37680199
Centisome position: 59.95
GC content: 50.72
Gene sequence:
>2910_bases GTGAAAATGCGCTTATTTGCCAAGAGTTTGGTTGCCTCAGCCATTGCGGGTCTATTGACCGCGTGTGGTGGTGGCGACGG TGGCGGTTCCGCGACCAGTCCAGCAACCCCTTCAACCCCAACTAAAGTAACGTTAACCGGCTTTGTCACGGAGTCTCAGC CAGTGAAAGTCACGGTCGATCAAACCGTCAAAACGGAAGTGAGACTGCTGGTGGGTGAAGAGGTCGTGGCGCGTTCAGCG ATCAAAATACACGCGGGAGAGCGTCAACCTCGCTATCTTTTAGAGGTGGATCCTGCCACTCTCGGCGAGGGGCTCCCAAT GACGATTGAGGCAGTCAGCGTGATCTCCCCACGTGAACAAGAGGCCAACGCGCGCACTGCTGAAAAAGCACAAACGGAAG ATCAAGCGTCATCAGAAACTCGTGAAGTGTTGCTTTATCGCAATGCCATTGGCACCAAGTTGCCGCTACTCGCCGCAGAT AAAAACAACGATAAATTCATTACCCATGATGAATGGCTGCCACTGACTTTCTCGCAAACCAACTCGTTGTTTGTTGCACT CGATCCAAGTGGCGAACAAAGTGCACTTGAACTGATGAACGAACATGGGCGAGAGAGAATCATGGCCATCGCCGCGTTGC TGCATGCGATCGCCGATCCTTTTGATCGCGAAGAACAAATCGAACTCACCTCGCTCAATCTCTCGACCGCTGCCTTAATT GATGCCCTGCTTAAGAATGAAAACATGGCCGCTGCCACAACCGAGGAAGAGACGCCTTGGTTGGATAGAGTGAGCAACAC TTACCAAGCGATGGCACAAACCCATCAAGTGGCACTACCCGACGGTTGGCAGAAGCGTATTAAAGACAAATGGATCGAGA TGCACGCGGTCAAGCAAAGCAATGTACTGCGCGAAGTATTAGATAACTCTTACCCAACCCGCACCTTGGTACTCCGTGGC GAAACGGTTTCAGGAATGAAGAACCCGCAGATTTCGCTACAAATGGGTTCTTATCCTAACGATCCTTTAGCAAACAGCCA TTACGACAACCCACTCAAACCCAAACGCCCATTGCTGGTACCAATTACCCCTGTGGGTGAAGAAAAATCGTCGACGGCTA TTGAAGGGGCAAATCGTCAATTTGAGTTCCGCGTAACGCTTCGCGATACCGCGCAAGGCTTTGAAACTTGTCAGCCCACG GCGAACGGCGTGTATGTTTACTACGATAAAAACGCCGATCTGACCAAGCCAAGCGCCCATCCGACCGACAATATGCAAGA TTTGCTGACCGTGATTGCGTTTGATCCAGACAGCGGTGTCGAGATGCGTTCCTACTTGGGCGCCTTCTGTGAACTGGCGA GAGCTGATATCGACAAGAACCAAGATGGCATCGTCACTGCCGAAGAGTTTCCGCGTTTAAAAGTCTCATTTGAAAACAAC GCACACGCCCTGTTGGCTGAACGCAGTGGCTTGATGCATCACGGTGGCGGCCAATATGCCAAACCCGTCAAACAGACCGC GATCGATGAACTGTTTGCCAAGCATACGCCGGAAATGGTGCAGTTGATGAGTAGCATTGTGGCGATGCAAATGGCATCAG CAGAAAATCAGGCACTACCGGCCATCGACAATGCCTCAGACTTTTTCCGCACCGCTGCTCAGTTGCTCGATCTCGACTAC AACGCTCAGTACCGTATGTACAGTAAAAGCAACATTCTGCCTGAGCCGTTTCAAGTCATCCAACTGCTGAAAAACATCGC CGATGTCGCCCATCATATGGAAGATAACGAGGCCACCATCAACACGCTGTTGACGTGGAGTGCGCAAGCTTTCACTCACC TTAGCCAATTTGCTGCGGACAACCAGATCGCTGCCGACTTAAACACGGCAATCAACGCTGGTAATAGTTGGCTACCCGCC GAGCCAGTGAATGGATTGGAGTCGATTTGCAGCACCGAATTTGCCGAAGACCAAATTCGTGGCATTGCACTTCGTGGACG TGGGGACGATTGGCTCACATTAGAATGGCTGCCGCAAGGAACCAGTGGCTATACCGTCTACTGGGACACCAAGCCGTTTA GTCAACTGAGTGAAGCGACCAATCAGACTAAGAGCGCAACGCACAGAGTGACATTAAATGGTTTAACGCCGTTTACTCGC TACTATTTCCAGATCGCGCACGATGGCACGCCGAGCGCTCAGTTCAATGTTCGAGTTAGCGATGCTGGCCTAACCAATCC TCATCTCTTTGATTCGGATTTTAGCTGTGACCCCATGAGTGGTTATGCACGAAACTCCAACATCGATGGTTACCAATCGC TTTCTTTCCTAAAAGTGGATGCGCAAGGTGAACGTTTGAGTCGACAAGATCTTCCGTATGTTGCAACCCCTCACAGCTGC GCAGTTGAAACCAAAACTGGCCGAACGTGGGCCGTGCCAAATAGCGAGATGGTGGAAGGTGATCGCATTCGTCACTGGTA CAGCATCGATAACCGATATCTGCATGGTGACAACCTGGCGGTGACAGACGACCAATACAACGGATTTTGTGTCGCCACCA ACGGTGAGGTTTATCGCCAAGACAAAGCGCGCCACTGCACGGTAAACCAACTTGTTCAACGCGCCAATGAAGCCAAACTT TGCGGCATCACCGATTGGAGGCTGCCGACCTACGAAGAAACGCTCAATATTATGACTTTGAAAGGCAAGCCTCAGTTGAA CTTTGATGACGATTTCTTCCCGAATATTGACGAAAACAAGCTGTGGATGAAGCAAGAAAACCCTGATGTTAAAACCCAAG CAAACCTACTTTTCCCAACCCGTTGGAACGCACGAACGCAATTAGAAGGCAAAGAGGTGCCTCACCAGGTGATGCTGGTG AGCGATGGTTTAAAAGTGAATCAGGAATAA
Upstream 100 bases:
>100_bases TTTTATTGTTAATCAGATCATTGATCTGATATGTAGAGTATTTATTCAAATCACGGCGTCATTTCCCTTCTCATCTATCG AGCAAATTTTTCAATAAGGA
Downstream 100 bases:
>100_bases GGACGCAAATATGAAAACGACTTTTCTCATCTCATTAGCAGCGGTACTCTCAACTCCGCTCTATGCGCAATGCCTTCCTG AAGAGGGGCGTTTTGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 969; Mature: 969
Protein sequence:
>969_residues MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV SDGLKVNQE
Sequences:
>Translated_969_residues MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV SDGLKVNQE >Mature_969_residues MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVDQTVKTEVRLLVGEEVVARSA IKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQEANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAAD KNNDKFITHDEWLPLTFSQTNSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQSNVLREVLDNSYPTRTLVLRG ETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLVPITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPT ANGVYVYYDKNADLTKPSAHPTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALPAIDNASDFFRTAAQLLDLDY NAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATINTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPA EPVNGLESICSTEFAEDQIRGIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVDAQGERLSRQDLPYVATPHSC AVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLAVTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKL CGITDWRLPTYEETLNIMTLKGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV SDGLKVNQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107598; Mature: 107598
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00018 EF_HAND_1 ; PS50853 FN3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEC QTVKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQ CHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHCCCCCCEEEEEEECCCCCHH EANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQT HCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECC NSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQS HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHH NVLREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLV HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE PITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAH EECCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCC PTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCC AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALP CEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC AIDNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATI CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE NTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIR EHEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR EEEEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHE YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVD EEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC AQGERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLA CCCCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEE VTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTL EECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEE KGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCEEEEEE SDGLKVNQE ECCEECCCC >Mature Secondary Structure MKMRLFAKSLVASAIAGLLTACGGGDGGGSATSPATPSTPTKVTLTGFVTESQPVKVTVD CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEC QTVKTEVRLLVGEEVVARSAIKIHAGERQPRYLLEVDPATLGEGLPMTIEAVSVISPREQ CHHCCHHHHHHHHHHHHCCEEEEECCCCCCCEEEEECHHHCCCCCCEEEEEEECCCCCHH EANARTAEKAQTEDQASSETREVLLYRNAIGTKLPLLAADKNNDKFITHDEWLPLTFSQT HCCCHHHHHHHHHHHHHHHHHHEEEEHHCCCCCCEEEEECCCCCEEEECCCEEEEEEECC NSLFVALDPSGEQSALELMNEHGRERIMAIAALLHAIADPFDREEQIELTSLNLSTAALI CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHH DALLKNENMAAATTEEETPWLDRVSNTYQAMAQTHQVALPDGWQKRIKDKWIEMHAVKQS HHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHH NVLREVLDNSYPTRTLVLRGETVSGMKNPQISLQMGSYPNDPLANSHYDNPLKPKRPLLV HHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEE PITPVGEEKSSTAIEGANRQFEFRVTLRDTAQGFETCQPTANGVYVYYDKNADLTKPSAH EECCCCCCCCCCCCCCCCCEEEEEEEECCHHCHHHHCCCCCCCEEEEECCCCCCCCCCCC PTDNMQDLLTVIAFDPDSGVEMRSYLGAFCELARADIDKNQDGIVTAEEFPRLKVSFENN CCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCEEEEEECCC AHALLAERSGLMHHGGGQYAKPVKQTAIDELFAKHTPEMVQLMSSIVAMQMASAENQALP CEEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC AIDNASDFFRTAAQLLDLDYNAQYRMYSKSNILPEPFQVIQLLKNIADVAHHMEDNEATI CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE NTLLTWSAQAFTHLSQFAADNQIAADLNTAINAGNSWLPAEPVNGLESICSTEFAEDQIR EHEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC GIALRGRGDDWLTLEWLPQGTSGYTVYWDTKPFSQLSEATNQTKSATHRVTLNGLTPFTR EEEEECCCCCEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEEEECCCCHHHE YYFQIAHDGTPSAQFNVRVSDAGLTNPHLFDSDFSCDPMSGYARNSNIDGYQSLSFLKVD EEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEC AQGERLSRQDLPYVATPHSCAVETKTGRTWAVPNSEMVEGDRIRHWYSIDNRYLHGDNLA CCCCCCHHCCCCEEECCCCCEEEECCCCEEECCCCCCCCCCCEEEEEECCCEEEECCCEE VTDDQYNGFCVATNGEVYRQDKARHCTVNQLVQRANEAKLCGITDWRLPTYEETLNIMTL EECCCCCCEEEEECCCEEECCCCCCCCHHHHHHHCCCCEEECEECCCCCCHHHCEEEEEE KGKPQLNFDDDFFPNIDENKLWMKQENPDVKTQANLLFPTRWNARTQLEGKEVPHQVMLV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEECCEEEECCCCCCCCCCCCCCCEEEEEE SDGLKVNQE ECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA