Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680177
Identifier: 37680177
GI number: 37680177
Start: 1990791
End: 1991243
Strand: Direct
Name: 37680177
Synonym: VV1993
Alternate gene names: NA
Gene position: 1990791-1991243 (Clockwise)
Preceding gene: 37680172
Following gene: 37680180
Centisome position: 59.35
GC content: 47.68
Gene sequence:
>453_bases ATGTACGACACCCATCTAGAAATGCAGCACATCTTGTTAGAAGTGAAAGCGGAACGTTGGCACGCCATCGAGCGCTTCCT TTTCCCTTATTATTGCTATCAGCACCAATTGCTCACGCGTCAAGGCAAACCAGATTGGCACTTAGCAAGAGAAAAGTTGC CTCGTTCGGCTTCGGTTGTCACCACCAAGCAATGTGTTATTGAGCCACTCGTGCCTGAGCAGAGCATCGTCGGTTTGCTG AAAGCCTACTGGAAAGACCATGAGCAGATCTCTTTGCTATCACTGACATCGCTGTTTGAGCAATGGCTGCACTACGCTGT GATCACCAAAGATGAGCAAGCAAGTCTGAAAAAAGCGGGGTTAGAAAACGCCATGCCAAAGGAATGGTATCAGGATGAAC AACCGTCGGTGGAAGCACGTTTTGAGAAAGTGGGGATAAAAATAAACCGCTAA
Upstream 100 bases:
>100_bases ATTGATTCACTTGCTTACTCCGCCAAACCACGCTTTCACGCAGAACTGCGTTACAATAAGCCCATCCGATTCGAGTTTAC TGTAAAGCCACATCGCACTT
Downstream 100 bases:
>100_bases CAAGGTAGCGGTTTATAGGAACAATTTCGCGTCAGCTTATAGGAAGTGTAGCGTCGCATTCAGTGAGAAAGTACCCACAT CATCTTTGTCCATGGTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MYDTHLEMQHILLEVKAERWHAIERFLFPYYCYQHQLLTRQGKPDWHLAREKLPRSASVVTTKQCVIEPLVPEQSIVGLL KAYWKDHEQISLLSLTSLFEQWLHYAVITKDEQASLKKAGLENAMPKEWYQDEQPSVEARFEKVGIKINR
Sequences:
>Translated_150_residues MYDTHLEMQHILLEVKAERWHAIERFLFPYYCYQHQLLTRQGKPDWHLAREKLPRSASVVTTKQCVIEPLVPEQSIVGLL KAYWKDHEQISLLSLTSLFEQWLHYAVITKDEQASLKKAGLENAMPKEWYQDEQPSVEARFEKVGIKINR >Mature_150_residues MYDTHLEMQHILLEVKAERWHAIERFLFPYYCYQHQLLTRQGKPDWHLAREKLPRSASVVTTKQCVIEPLVPEQSIVGLL KAYWKDHEQISLLSLTSLFEQWLHYAVITKDEQASLKKAGLENAMPKEWYQDEQPSVEARFEKVGIKINR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17778; Mature: 17778
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDTHLEMQHILLEVKAERWHAIERFLFPYYCYQHQLLTRQGKPDWHLAREKLPRSASVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHH TTKQCVIEPLVPEQSIVGLLKAYWKDHEQISLLSLTSLFEQWLHYAVITKDEQASLKKAG HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LENAMPKEWYQDEQPSVEARFEKVGIKINR CCCCCCCHHCCCCCCCHHHHHHHHCCEECC >Mature Secondary Structure MYDTHLEMQHILLEVKAERWHAIERFLFPYYCYQHQLLTRQGKPDWHLAREKLPRSASVV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHH TTKQCVIEPLVPEQSIVGLLKAYWKDHEQISLLSLTSLFEQWLHYAVITKDEQASLKKAG HHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC LENAMPKEWYQDEQPSVEARFEKVGIKINR CCCCCCCHHCCCCCCCHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA