Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680163
Identifier: 37680163
GI number: 37680163
Start: 1976887
End: 1978368
Strand: Direct
Name: 37680163
Synonym: VV1979
Alternate gene names: NA
Gene position: 1976887-1978368 (Clockwise)
Preceding gene: 37680162
Following gene: 37680168
Centisome position: 58.93
GC content: 35.96
Gene sequence:
>1482_bases ATGAAAAATAAATTACCACTAACACTGATAGCTTTATCTGTATCATCGCAATCTTTTGCGACATCAGTATTACCCCCTGA AATGAGACCCGAAAGACCAGTGGGGATGAATCATGACAAAATGTGCCACTATGCAATATGCTCCAGTTTTGGCTACGGAA ACAATCCATATACAGGAGTAAGAGATCCAAGGTTTCTTCCAATTGGAGCAGAGTTAATCTATCCCACAGATAATTCTATT TTTGAAGATTTTGCAAACAAAAATGTGAACTCAATGGATCCAATATATGTTCTTGTGAATGGTATGGAAGATGCTGAAAT TTTAGCGAAAAAAATGGAAGGAATGCCATGGGAAGTCTATGTTCATTGCGAGGGGGATTGTCCTAGCAACCCCAATGAAG CAGAGGCTTCTGATGACAAATCAGATTCTGATGACAAATCAGATCCTGATGACAAATCAGATACTGATGACAAATCAGAT TCTGATGACAAATCAGATTCTGATGACAAATCAGATTCTGATGACAAATCAGATTCTGATGACAAATCAGATTCTAACGT TAATACTAATACAGTTGAAGTCGACAAAAAAGAATCGACTAAAGAAATCATTGAAAGTATGGGAAATATCGTAGTCAGAT CGCTTGCGACTTTACAAGTTTCCGGTTCAGCAAATGTTACAGTTGATCACACAACTAACCCAACAACTAAAACTTTTTAT GATCAGAATACGGGAAAAGTATCATTGATCGAAAATAGTGATGCTACAACAACGAAAGTATCAATTACAATTTCTATTGG ACCAGGCTCATCTTCTGGCACAGAGCGGCGTTTAGATGATAGCTTTAATAATTACGGAGATTTCAATTTAAATATAGATT TCACTGATGGTTCAAATCTTTTCAATGAAAATGGTGCGAGTAATGTATGGAGTCAAAATCCATGGACTATACTTGATTCG AATAACGATGCACGTTATATCACGAGTGACATGATTAGTTACTTCTCTACGACATCAAGAAGCTTTTCATTTGGAAGGTT CACTACTAACTTTCCCATATATTTAAGTGATAGTAATTTATATAGCGAGATTAAGGATTTCTCGAACCCTTTCAAAATAA CATTGTTTGAATTAGCAATGTGGACAGACTTAACCGTTGGGGATTTGATGGCCGATCCTTTTGTTGGTACTAGATTTTCA TTCATGCCTTTAGCTGTAATTTACTCCCCAGAGTTCATTAGGGGGCTAATGGATAGCAAACAGGAAAAAGAAGAATCCGA TTATATCTACAAGATGTTCACCACTTCAAATCTAGCATGGCAAGCAAACTATAGAGATTATAAAAGTGTTTCTCTATATG AGTATCTCAATAACCCTGATGTTAATCCTTTGTTTAAAAATATGACATTAGGGGAACTGATCGAACCGAAAATCCTTCAG GTAATATATAGAGAAACTGGGCTTGACAAGGAAGTTTTTTGA
Upstream 100 bases:
>100_bases TGTGGAACTCTGGCGAGTACCGTCGCTACCGTCGTTCCATCGAACAGTTACCAATTATGGAATGACGTTTAAGGTATATT TTTAAAATAAAAGGAAAATC
Downstream 100 bases:
>100_bases TTCAAATATAAACTCCTTAAATATCTTTAATAAATTAAAACTCCACAGATGTGGAGTTTTAATTGTCATCCCTAAGTCAT CGCTTTTAGCGATAGTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKNKLPLTLIALSVSSQSFATSVLPPEMRPERPVGMNHDKMCHYAICSSFGYGNNPYTGVRDPRFLPIGAELIYPTDNSI FEDFANKNVNSMDPIYVLVNGMEDAEILAKKMEGMPWEVYVHCEGDCPSNPNEAEASDDKSDSDDKSDPDDKSDTDDKSD SDDKSDSDDKSDSDDKSDSDDKSDSNVNTNTVEVDKKESTKEIIESMGNIVVRSLATLQVSGSANVTVDHTTNPTTKTFY DQNTGKVSLIENSDATTTKVSITISIGPGSSSGTERRLDDSFNNYGDFNLNIDFTDGSNLFNENGASNVWSQNPWTILDS NNDARYITSDMISYFSTTSRSFSFGRFTTNFPIYLSDSNLYSEIKDFSNPFKITLFELAMWTDLTVGDLMADPFVGTRFS FMPLAVIYSPEFIRGLMDSKQEKEESDYIYKMFTTSNLAWQANYRDYKSVSLYEYLNNPDVNPLFKNMTLGELIEPKILQ VIYRETGLDKEVF
Sequences:
>Translated_493_residues MKNKLPLTLIALSVSSQSFATSVLPPEMRPERPVGMNHDKMCHYAICSSFGYGNNPYTGVRDPRFLPIGAELIYPTDNSI FEDFANKNVNSMDPIYVLVNGMEDAEILAKKMEGMPWEVYVHCEGDCPSNPNEAEASDDKSDSDDKSDPDDKSDTDDKSD SDDKSDSDDKSDSDDKSDSDDKSDSNVNTNTVEVDKKESTKEIIESMGNIVVRSLATLQVSGSANVTVDHTTNPTTKTFY DQNTGKVSLIENSDATTTKVSITISIGPGSSSGTERRLDDSFNNYGDFNLNIDFTDGSNLFNENGASNVWSQNPWTILDS NNDARYITSDMISYFSTTSRSFSFGRFTTNFPIYLSDSNLYSEIKDFSNPFKITLFELAMWTDLTVGDLMADPFVGTRFS FMPLAVIYSPEFIRGLMDSKQEKEESDYIYKMFTTSNLAWQANYRDYKSVSLYEYLNNPDVNPLFKNMTLGELIEPKILQ VIYRETGLDKEVF >Mature_493_residues MKNKLPLTLIALSVSSQSFATSVLPPEMRPERPVGMNHDKMCHYAICSSFGYGNNPYTGVRDPRFLPIGAELIYPTDNSI FEDFANKNVNSMDPIYVLVNGMEDAEILAKKMEGMPWEVYVHCEGDCPSNPNEAEASDDKSDSDDKSDPDDKSDTDDKSD SDDKSDSDDKSDSDDKSDSDDKSDSNVNTNTVEVDKKESTKEIIESMGNIVVRSLATLQVSGSANVTVDHTTNPTTKTFY DQNTGKVSLIENSDATTTKVSITISIGPGSSSGTERRLDDSFNNYGDFNLNIDFTDGSNLFNENGASNVWSQNPWTILDS NNDARYITSDMISYFSTTSRSFSFGRFTTNFPIYLSDSNLYSEIKDFSNPFKITLFELAMWTDLTVGDLMADPFVGTRFS FMPLAVIYSPEFIRGLMDSKQEKEESDYIYKMFTTSNLAWQANYRDYKSVSLYEYLNNPDVNPLFKNMTLGELIEPKILQ VIYRETGLDKEVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55268; Mature: 55268
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLPLTLIALSVSSQSFATSVLPPEMRPERPVGMNHDKMCHYAICSSFGYGNNPYTGV CCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC RDPRFLPIGAELIYPTDNSIFEDFANKNVNSMDPIYVLVNGMEDAEILAKKMEGMPWEVY CCCEEEEECCEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEE VHCEGDCPSNPNEAEASDDKSDSDDKSDPDDKSDTDDKSDSDDKSDSDDKSDSDDKSDSD EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKSDSNVNTNTVEVDKKESTKEIIESMGNIVVRSLATLQVSGSANVTVDHTTNPTTKTFY CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEE DQNTGKVSLIENSDATTTKVSITISIGPGSSSGTERRLDDSFNNYGDFNLNIDFTDGSNL ECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCCC FNENGASNVWSQNPWTILDSNNDARYITSDMISYFSTTSRSFSFGRFTTNFPIYLSDSNL CCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEECCEEECCCCEEEECCHH YSEIKDFSNPFKITLFELAMWTDLTVGDLMADPFVGTRFSFMPLAVIYSPEFIRGLMDSK HHHHHHCCCCEEEEEEEEEHHCCCCHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHH QEKEESDYIYKMFTTSNLAWQANYRDYKSVSLYEYLNNPDVNPLFKNMTLGELIEPKILQ HHHCCCCEEEEEEECCCEEEEECCCCCCCEEHHHHHCCCCCCHHHHCCCHHHHCCHHHHH VIYRETGLDKEVF HHHHHCCCCCCCC >Mature Secondary Structure MKNKLPLTLIALSVSSQSFATSVLPPEMRPERPVGMNHDKMCHYAICSSFGYGNNPYTGV CCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC RDPRFLPIGAELIYPTDNSIFEDFANKNVNSMDPIYVLVNGMEDAEILAKKMEGMPWEVY CCCEEEEECCEEEECCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEEE VHCEGDCPSNPNEAEASDDKSDSDDKSDPDDKSDTDDKSDSDDKSDSDDKSDSDDKSDSD EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DKSDSNVNTNTVEVDKKESTKEIIESMGNIVVRSLATLQVSGSANVTVDHTTNPTTKTFY CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCEEEE DQNTGKVSLIENSDATTTKVSITISIGPGSSSGTERRLDDSFNNYGDFNLNIDFTDGSNL ECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEECCCCCC FNENGASNVWSQNPWTILDSNNDARYITSDMISYFSTTSRSFSFGRFTTNFPIYLSDSNL CCCCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCCEECCEEECCCCEEEECCHH YSEIKDFSNPFKITLFELAMWTDLTVGDLMADPFVGTRFSFMPLAVIYSPEFIRGLMDSK HHHHHHCCCCEEEEEEEEEHHCCCCHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHHH QEKEESDYIYKMFTTSNLAWQANYRDYKSVSLYEYLNNPDVNPLFKNMTLGELIEPKILQ HHHCCCCEEEEEEECCCEEEEECCCCCCCEEHHHHHCCCCCCHHHHCCCHHHHCCHHHHH VIYRETGLDKEVF HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA