Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37522548
Identifier: 37522548
GI number: 37522548
Start: 3178078
End: 3179781
Strand: Direct
Name: 37522548
Synonym: glr2979
Alternate gene names: NA
Gene position: 3178078-3179781 (Clockwise)
Preceding gene: 37522547
Following gene: 37522549
Centisome position: 68.21
GC content: 61.74
Gene sequence:
>1704_bases ATGTGCGCGTACCGGACGTGTCGGTCACAGCCCCCACCCCTGCGGAACCGCCCGAACCCGCCGTTCCGTAGAATCCGTGA CCAGCCATGCGCGGCGGGCCGTCCCATTTGGTGGGGCGGCCCACTTTTTGAGCAGAAAGTGAACAGTTTCTGGGCTGGCA GTGAGGGATGCCCCCGGGGGAGGATGCTCCCAGAAGGCGTACGACCTAGAGTCCTTCTGGACGATCCACAGCTTGGTTTC CTACTGTCTGCTTGCTCATGGAGGAGCACAATGAAGTTTCATCCGACCCACTGCGCGCTCGCGCTCGGACTGTTGGCCGG TCTGGGCGCCCCTGCGGCGTTCGCATCGAGCCACCGCGAAGCGCCTTTTATCACCCAGCACCCAAAGCTGGACGGCACCG ATTGGTACATGTTCAACAGTTATGAGACAGGCCGTGAGGGCTACGTCACGCTGATTGCCAACTATCTGCCCCTGCAGGAT GCCTACGGCGGGCCGAACTACTTCACCCTCGATCCGAAGGCCCGCTACGACATCAATATCGACAACGACGGCGACGCCAA AATCGACATTCGCTTTCGGTTCAATTTCCAAAACACCCTCAACGACATCGCCCTCGACATCGCCGGCAAGCAAATCTCCA TTCCGTTTGTAAACATCGGCCCGACCACCGTCGGCAACACCGCCAACCTCAACGTCGTCGAGACCTACACCGTCGAACAT TGGCGCAACGGCAAAGTGCAGCAGGTCACCGACGCCAAAACCAGGGGTGCGCGCTTCACCAAGCCCGCCGACAACATCGG CAACAAGTCTTTCCCCGACTACGCCGCCTACGCCAACAGCTACATCTACGACATCAAAATTCCCGGCTGCTCCACCAACG GCCGCATGTTCGTCGGCCAGCGCAAAGATCCGTTTGTAGTCAACCTGGGTGAAGTTTTCGATTTGGTCAACGTCACCAAC CCCCTCGGCCCGGTGAACGCCGAGGCGGACGACCTGGCCGACAAGAACATCACCTCGCTGATTCTGGAAGTCCCCACCAG TTGCCTCACGGCGGGCGGTGATCCGGTGATTGGCGGCTGGACCAGTTCGAGCGCCCCGGCCAACCGCACCCTTCTACCCA ACGGCAGCTATCTCAATCCGGCCACTGAAACCGGTCCCTTCGTCCAACAATCGCGCCTGGCCAACCCCCTGGTCAACGAG TTGGTGATTGGCCTCAAGGACAAGAACAGCTTCAACAGCAGTCTTCCCCAGAGCGACGTCCAGTTCGCAGACTACGTGAC CAACCCGACCCTTCCCGCCGTTCTGGAATTGCTCTTCGGCACCGCCGCCCCCACCGTGTTCCCCCGCAACGACCTCGTAT CGGTGTTCCTCACCGGCGTGGACGGTCTCAATAAGCCCAAGAGCGTCACGCCCGCCGAATTGATGCGCCTCAACACCAGC ATCCCGCCCACCCCGGCGGACAAGCAAAACACCCTGGGGGTGGTCGGCGGTGACCTGGCGGGTTATCCCAACGGCCGCCG TCCCGGCGACGACGCCGTGGACATCTCGCTGCGGGCGGTGATGGGTGTGCTGCTGCCGCCGGATCAGGCCCCTTCCGGAA CGCTTCCCTTTACTGACGGCGCTTTCCACGACGCGAGCTTCTACGACACGAAGTTCCCGTACCTGCGCACCCCCATCGCC GGCTCCCCGAACAACACCCCGTGA
Upstream 100 bases:
>100_bases ATGGTGAGCATCGCCAAAAGCGACCCCGACGCCAAGATGCGCCAGGAGGCGATCCGCGCCCTGGGCACGAACGACAGCCG CTTCGGCGATATCGACATCG
Downstream 100 bases:
>100_bases GACTGGCGGCGGCGCATTACGGATCTACAACTGCGCCGCCGCTTTTTCTTTTACTGGCCATCGTCATGAAACTTTTACCC TGGCTCAGCGCAGTGGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MCAYRTCRSQPPPLRNRPNPPFRRIRDQPCAAGRPIWWGGPLFEQKVNSFWAGSEGCPRGRMLPEGVRPRVLLDDPQLGF LLSACSWRSTMKFHPTHCALALGLLAGLGAPAAFASSHREAPFITQHPKLDGTDWYMFNSYETGREGYVTLIANYLPLQD AYGGPNYFTLDPKARYDINIDNDGDAKIDIRFRFNFQNTLNDIALDIAGKQISIPFVNIGPTTVGNTANLNVVETYTVEH WRNGKVQQVTDAKTRGARFTKPADNIGNKSFPDYAAYANSYIYDIKIPGCSTNGRMFVGQRKDPFVVNLGEVFDLVNVTN PLGPVNAEADDLADKNITSLILEVPTSCLTAGGDPVIGGWTSSSAPANRTLLPNGSYLNPATETGPFVQQSRLANPLVNE LVIGLKDKNSFNSSLPQSDVQFADYVTNPTLPAVLELLFGTAAPTVFPRNDLVSVFLTGVDGLNKPKSVTPAELMRLNTS IPPTPADKQNTLGVVGGDLAGYPNGRRPGDDAVDISLRAVMGVLLPPDQAPSGTLPFTDGAFHDASFYDTKFPYLRTPIA GSPNNTP
Sequences:
>Translated_567_residues MCAYRTCRSQPPPLRNRPNPPFRRIRDQPCAAGRPIWWGGPLFEQKVNSFWAGSEGCPRGRMLPEGVRPRVLLDDPQLGF LLSACSWRSTMKFHPTHCALALGLLAGLGAPAAFASSHREAPFITQHPKLDGTDWYMFNSYETGREGYVTLIANYLPLQD AYGGPNYFTLDPKARYDINIDNDGDAKIDIRFRFNFQNTLNDIALDIAGKQISIPFVNIGPTTVGNTANLNVVETYTVEH WRNGKVQQVTDAKTRGARFTKPADNIGNKSFPDYAAYANSYIYDIKIPGCSTNGRMFVGQRKDPFVVNLGEVFDLVNVTN PLGPVNAEADDLADKNITSLILEVPTSCLTAGGDPVIGGWTSSSAPANRTLLPNGSYLNPATETGPFVQQSRLANPLVNE LVIGLKDKNSFNSSLPQSDVQFADYVTNPTLPAVLELLFGTAAPTVFPRNDLVSVFLTGVDGLNKPKSVTPAELMRLNTS IPPTPADKQNTLGVVGGDLAGYPNGRRPGDDAVDISLRAVMGVLLPPDQAPSGTLPFTDGAFHDASFYDTKFPYLRTPIA GSPNNTP >Mature_567_residues MCAYRTCRSQPPPLRNRPNPPFRRIRDQPCAAGRPIWWGGPLFEQKVNSFWAGSEGCPRGRMLPEGVRPRVLLDDPQLGF LLSACSWRSTMKFHPTHCALALGLLAGLGAPAAFASSHREAPFITQHPKLDGTDWYMFNSYETGREGYVTLIANYLPLQD AYGGPNYFTLDPKARYDINIDNDGDAKIDIRFRFNFQNTLNDIALDIAGKQISIPFVNIGPTTVGNTANLNVVETYTVEH WRNGKVQQVTDAKTRGARFTKPADNIGNKSFPDYAAYANSYIYDIKIPGCSTNGRMFVGQRKDPFVVNLGEVFDLVNVTN PLGPVNAEADDLADKNITSLILEVPTSCLTAGGDPVIGGWTSSSAPANRTLLPNGSYLNPATETGPFVQQSRLANPLVNE LVIGLKDKNSFNSSLPQSDVQFADYVTNPTLPAVLELLFGTAAPTVFPRNDLVSVFLTGVDGLNKPKSVTPAELMRLNTS IPPTPADKQNTLGVVGGDLAGYPNGRRPGDDAVDISLRAVMGVLLPPDQAPSGTLPFTDGAFHDASFYDTKFPYLRTPIA GSPNNTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61609; Mature: 61609
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAYRTCRSQPPPLRNRPNPPFRRIRDQPCAAGRPIWWGGPLFEQKVNSFWAGSEGCPRG CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCC RMLPEGVRPRVLLDDPQLGFLLSACSWRSTMKFHPTHCALALGLLAGLGAPAAFASSHRE CCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHCCCC APFITQHPKLDGTDWYMFNSYETGREGYVTLIANYLPLQDAYGGPNYFTLDPKARYDINI CCCEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHHHCCCCCCEEEECCCCEEEEEC DNDGDAKIDIRFRFNFQNTLNDIALDIAGKQISIPFVNIGPTTVGNTANLNVVETYTVEH CCCCCEEEEEEEEECCHHHHHHEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHH WRNGKVQQVTDAKTRGARFTKPADNIGNKSFPDYAAYANSYIYDIKIPGCSTNGRMFVGQ CCCCCEEEECCHHHCCCCCCCCHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCCEEEEEC RKDPFVVNLGEVFDLVNVTNPLGPVNAEADDLADKNITSLILEVPTSCLTAGGDPVIGGW CCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHCCHHHHHCCCCCEEECC TSSSAPANRTLLPNGSYLNPATETGPFVQQSRLANPLVNELVIGLKDKNSFNSSLPQSDV CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC QFADYVTNPTLPAVLELLFGTAAPTVFPRNDLVSVFLTGVDGLNKPKSVTPAELMRLNTS HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHEEECCCCCCCCCCCCHHHHHHHCCC IPPTPADKQNTLGVVGGDLAGYPNGRRPGDDAVDISLRAVMGVLLPPDQAPSGTLPFTDG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCCC AFHDASFYDTKFPYLRTPIAGSPNNTP CCCCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MCAYRTCRSQPPPLRNRPNPPFRRIRDQPCAAGRPIWWGGPLFEQKVNSFWAGSEGCPRG CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCC RMLPEGVRPRVLLDDPQLGFLLSACSWRSTMKFHPTHCALALGLLAGLGAPAAFASSHRE CCCCCCCCCCEEECCCCCCHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCHHHHHCCCC APFITQHPKLDGTDWYMFNSYETGREGYVTLIANYLPLQDAYGGPNYFTLDPKARYDINI CCCEECCCCCCCCEEEEECCCCCCCCCEEEEEEECCCHHHCCCCCCEEEECCCCEEEEEC DNDGDAKIDIRFRFNFQNTLNDIALDIAGKQISIPFVNIGPTTVGNTANLNVVETYTVEH CCCCCEEEEEEEEECCHHHHHHEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHH WRNGKVQQVTDAKTRGARFTKPADNIGNKSFPDYAAYANSYIYDIKIPGCSTNGRMFVGQ CCCCCEEEECCHHHCCCCCCCCHHHCCCCCCCCHHHHHCCEEEEEEECCCCCCCEEEEEC RKDPFVVNLGEVFDLVNVTNPLGPVNAEADDLADKNITSLILEVPTSCLTAGGDPVIGGW CCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHCCHHHHHCCCCCEEECC TSSSAPANRTLLPNGSYLNPATETGPFVQQSRLANPLVNELVIGLKDKNSFNSSLPQSDV CCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC QFADYVTNPTLPAVLELLFGTAAPTVFPRNDLVSVFLTGVDGLNKPKSVTPAELMRLNTS HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCEEEHEEECCCCCCCCCCCCHHHHHHHCCC IPPTPADKQNTLGVVGGDLAGYPNGRRPGDDAVDISLRAVMGVLLPPDQAPSGTLPFTDG CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCCC AFHDASFYDTKFPYLRTPIAGSPNNTP CCCCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA