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The map label for this gene is yjcF [C]

Identifier: 37521545

GI number: 37521545

Start: 2122922

End: 2123746

Strand: Reverse

Name: yjcF [C]

Synonym: gll1976

Alternate gene names: 37521545

Gene position: 2123746-2122922 (Counterclockwise)

Preceding gene: 37521546

Following gene: 37521541

Centisome position: 45.58

GC content: 59.64

Gene sequence:

>825_bases
ATGTTTATTGTCGACTATTTCAGGGACATCTTTCGGGACTTGTACCTGGCTTGGCAGCACGACCGAGACGCCGCCGCCCA
GGACAAACAAACGGTGCACAACGCCCAGGAGTTGCTGGAGCGCTACGCCCGGGGCGAGCGCTATTTCGTTTTGGCCGATC
TAGAAAAAGAAGACTTGCGCAACGTGGAGTTGCCGGGTGCTCATTTCATCCGTGCGTTCCTCAAAGGAGCGGACCTGCGC
GGCGCGAACCTGATCGGGGCGACCTTCGACCACTACACCGATCTCGAAGGAATGCTCATCGACGAGAAGACGCAGCTGGA
CCCCAAATGGCGCACGGTTTGGGAGCTTGTCAACCTGCCGCCGGTCACAGGCCGGCAACTGCCGGGAGCAGATCTATCCA
GCACCCAGCTGACGGGGGTCCATTTGCAGCGGGCCAACCTGGCGGGGACCGATCTTTCGGGGGCCTGTTTGGATGAAGCG
AAATTGCAGGAAGCGAATCTGGAAGGAGCTATCCTGCGTGAGGCACGTTTTGTCAGTGCCAATTTGCGGGGAGTAAACCT
CAGAGGAGCGGATTGCCAAGAGGCCAAACTATTTGACGCCAACCTGTGCGATACCGATTTGCGCGAAGCCAACCTCTCCA
AGGCGAACTTGATCGAAGCTGTACTGGTCGGCGCCGATCTGCGCGGGGCGGACCTGCGCGGGGCGAACCTGGACAGTGCG
AACTGCAAGGGTGCAAATCTGGAAGGGGCGAATCTGGAAGGGGCGAATCTGGCGCAGGTGTTGCTGGCAGGGGCCACGAT
GCCCGACGGGAGCATCCATCCTTGA

Upstream 100 bases:

>100_bases
AGCGGTGGGGTATTTGGGCGGTTCAGCACTGGGGCAGAGCGCAGCAGAACGAGCTACAGGCTCTCCACGGCCACAACCCT
AGCCAAGGAGGCGTAGAGAG

Downstream 100 bases:

>100_bases
ACGCCCGGAACACCCGCAGGTCACGGTTGCCAAGAGTCGGGCGGCAGCACAGGCGGGCGACGGTTTTGGAATAGGGCGTG
CAGCCCCAGCAAGCCTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MFIVDYFRDIFRDLYLAWQHDRDAAAQDKQTVHNAQELLERYARGERYFVLADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLIGATFDHYTDLEGMLIDEKTQLDPKWRTVWELVNLPPVTGRQLPGADLSSTQLTGVHLQRANLAGTDLSGACLDEA
KLQEANLEGAILREARFVSANLRGVNLRGADCQEAKLFDANLCDTDLREANLSKANLIEAVLVGADLRGADLRGANLDSA
NCKGANLEGANLEGANLAQVLLAGATMPDGSIHP

Sequences:

>Translated_274_residues
MFIVDYFRDIFRDLYLAWQHDRDAAAQDKQTVHNAQELLERYARGERYFVLADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLIGATFDHYTDLEGMLIDEKTQLDPKWRTVWELVNLPPVTGRQLPGADLSSTQLTGVHLQRANLAGTDLSGACLDEA
KLQEANLEGAILREARFVSANLRGVNLRGADCQEAKLFDANLCDTDLREANLSKANLIEAVLVGADLRGADLRGANLDSA
NCKGANLEGANLEGANLAQVLLAGATMPDGSIHP
>Mature_274_residues
MFIVDYFRDIFRDLYLAWQHDRDAAAQDKQTVHNAQELLERYARGERYFVLADLEKEDLRNVELPGAHFIRAFLKGADLR
GANLIGATFDHYTDLEGMLIDEKTQLDPKWRTVWELVNLPPVTGRQLPGADLSSTQLTGVHLQRANLAGTDLSGACLDEA
KLQEANLEGAILREARFVSANLRGVNLRGADCQEAKLFDANLCDTDLREANLSKANLIEAVLVGADLRGADLRGANLDSA
NCKGANLEGANLEGANLAQVLLAGATMPDGSIHP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=134, Percent_Identity=40.2985074626866, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI221377802, Length=198, Percent_Identity=32.3232323232323, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 30022; Mature: 30022

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIVDYFRDIFRDLYLAWQHDRDAAAQDKQTVHNAQELLERYARGERYFVLADLEKEDLR
CEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHC
NVELPGAHFIRAFLKGADLRGANLIGATFDHYTDLEGMLIDEKTQLDPKWRTVWELVNLP
CCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCC
PVTGRQLPGADLSSTQLTGVHLQRANLAGTDLSGACLDEAKLQEANLEGAILREARFVSA
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEEEC
NLRGVNLRGADCQEAKLFDANLCDTDLREANLSKANLIEAVLVGADLRGADLRGANLDSA
CCEEEECCCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
NCKGANLEGANLEGANLAQVLLAGATMPDGSIHP
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFIVDYFRDIFRDLYLAWQHDRDAAAQDKQTVHNAQELLERYARGERYFVLADLEKEDLR
CEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHC
NVELPGAHFIRAFLKGADLRGANLIGATFDHYTDLEGMLIDEKTQLDPKWRTVWELVNLP
CCCCCHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCC
PVTGRQLPGADLSSTQLTGVHLQRANLAGTDLSGACLDEAKLQEANLEGAILREARFVSA
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHEEEC
NLRGVNLRGADCQEAKLFDANLCDTDLREANLSKANLIEAVLVGADLRGADLRGANLDSA
CCEEEECCCCCCCCCEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
NCKGANLEGANLEGANLAQVLLAGATMPDGSIHP
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA