Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is pksJ [H]

Identifier: 37521527

GI number: 37521527

Start: 2094402

End: 2096852

Strand: Reverse

Name: pksJ [H]

Synonym: gll1958

Alternate gene names: 37521527

Gene position: 2096852-2094402 (Counterclockwise)

Preceding gene: 37521528

Following gene: 37521526

Centisome position: 45.01

GC content: 66.46

Gene sequence:

>2451_bases
ATGGCCGACCGATTGGAGTACGCCTTGCCCGAAGATGCGACGTGCCTGCTGAGCGAAGACGGTTCGCAGCTGACGCCCCG
GCTGGCTGCGGCCCTCAGCGCCCGCGGCTGGCGGGTGGTCGTGCTCGCCTGGGCGGAAGCGGCCGGACCGGCTTTGCCCG
CCGGGATCGAGCGGGTGGTGGTGCCCGCCCCGGGCGATCGCGACATTCAAGCGGTCCTCGCAGCGATCCGCTCGCGCTGC
GGCACGGTGCGCGCCTTTGTGCACCTGCACCCGCCGCTGCCGATTGTCGAGCGGAGTACCATCGCGTTTTTGCCGTCTGA
GGCCGCTTTGATTGAGGGCGTTTTTTATCTGGCCAAACACCTGAAAAGCGCGCTGGAGGAAGCGGCCCGCAGCGCCCGCA
GCTGTTTTGTGACGGTCGCGCGCCTGGACGGCCGGTTGGGCGTAGAGCACAGCCGTCCCTGCAGTGCCCTTGCCGGCGGT
CTGTTCGGGTTGAGCAAAAGTCTGCACAAAGAATGGCCGAACGTTTACTGCCGGGCGGTGGATCTCTGCCCGGATTTGGC
CGTGGACGCCGCTGTGGAATGTCTGCTGGCGGAGCTGGACGACCCGGACCGGCGGCTTGTAGAAGTGGGACAGACCGGCG
AGCAGCGCACAACCCTCACTTGCGCGCCGGAGGAGGAGGGGGGCGAGCCGGCCGTCGCGCCGGTCGCCCCCCTCGGTTCG
CACTCCGTCTTGCTGGTGAGCGGCGGTGCCAGGGGAATCACTGCCCAATGCGTGGTGCACCTGGCCAAGCTCTACCGCTG
CCGGTTCGTGTTACTTGGGCGCTCGGCTATCGACGGACCCGAACCGCCGTGGGCAGCCGATGGCCACGGCGAACAGCAAC
TGCAGGAGCGGTTGGTGGCCCACCTCGCCGCGCGGGCAGACAAGCCCGAACCGCGCAAAATTCGCCGCGACCTCGACGCC
TTGCTGGCGCGGCGCGAGGTGGTGGCCACCCTGGAGGCGGTTGAGCGGGCGGGTGGAAAGGCCTTCTACTACAGCGTCGA
TGTGAGCGATCCGCTCGCCCTCGAAGCGGTCATCCGCTCGGCCACCGCCCAGGCTGGGCCGATCACCGGCCTCATCCACG
GGGCCGGGAACATCGCAGACAAGCGCATCGAGCACAAAACCGAGCAAGATTTTCGACGGGTTTACGGCGCCAAGGTGGCC
GGTTTGGCGAACCTGCTGCGGTGGGTGCCGGCCGGGCAGCTCGAACAGCTCATCTTGTTTTCTTCGGTGGTCGGGTTTTT
TGGCAACATTGGTCAAAGCGACTACGCCATCGCCAACGAAATCCTCAACAAAGTCGCCCACGCGGTGAAGTACCATCACC
CCGATTGCCACGTGACGGCAATCGACTGGGGGGCCTGGGACGGGGGTATGGTCACCCCGGAACTGATCCGCGCCTACCGG
CAGCAAAATTTGCCGCTGCCGCGCATTGCGATCGAGACCGGCGTCGGGTTGCTTGCCGGGCAACTTCTACCCAAACGCCG
CGAGCAGGTGCAGGTGGTGATCGGTGAGCCGCTCGCCCCCGCCGCGCCGCAGGCACCGCTCTGCGAGCAACGCCACTGGC
GGATTGCCCGCCGAATGAGCCTGGCCGGCAACCCGTTCGTCCGCGACCATAGAATCGGCGAGCACCCCGTGCTGCCCTCG
ATGTGCGCAGCGGGCTGGATGGTCGATGGGTGCGAGCAACTGTTCGCCGGCTACCGCTGCTTGCAATTGCAAGATTTTCG
AGTGCTCAAGGGGATCGTCTTCGATGGCGGCGAACCGGAAACGCTGTATCTGGAGATCGCGGAGCCTGGCCAGAGGCAAT
CGGGCCGCATAGAACTCGACACGCTGATCTGGAGCCAGGCCGGGCCGGGACCGGCTCGCCGCCATTTCAGCGGCCGGGCG
ATCCTGCTTGCCGAGTTGCCCTCCTCTACCCAGTCGCACCGTTCGGACTGTGCCCGAGAAGGCTCCTTTGCCGTGGCGCC
GCTGTACGAAGATGGGACGCTCTTTCACGGCCCGAGCTTCCGGGGGCTTGAAGCGGTTTTGAGCCTCGATGCCCGCCGGG
TGGAGGTCCGCTGTCGGGTGTTGCCGCCGGACGCGGCTTGCCAGGGCCAATTTCCCGCCCGTGCGTTCAATCCCTATATT
CTGGACCAGTTGCTGCAAGCGGCCCTCGTCTTCGTCCAGCACCACCACCGGCAGGGATGCTTGCCCGCTCGGGTGGAGTG
CATCGAACAGTTTCGCAGCCCGGCTTTTGGCGAAGTGTTCACGATCGATTTCGAGTGCACCGCCCACTCCGAGGCGGGCG
TCGTCGGCGAGGCGGCCGCCTACGACGCCGGCGGCCGCCTGTGCGTCCGGATGCAGGGAATGCACCTGACGATGGGTCCG
CAACTGAAGTCCCTGTTTGCCCGATCCGGGAGGGCGCGATGGAAAGCATAG

Upstream 100 bases:

>100_bases
AGGGAGCGGCCAAAAAAAAGTCCCCGGCCGTCCTGCCGACGAGGTTGGTGAGCTGAACTGGACCCCCGAGCGGCGCATCG
CCGTTCTGGAGCGCTTGCCC

Downstream 100 bases:

>100_bases
CCATCATCGGGATAGCCTGTCTGTTTCCCGGTGCAAACGATCCGGCCCAGTTCTGGCGGAATTTGCTCGATGGGCGGTGT
GAGCCGGGCGACTGCGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: PKS [H]

Number of amino acids: Translated: 816; Mature: 815

Protein sequence:

>816_residues
MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRC
GTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGG
LFGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS
HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDA
LLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVA
GLANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR
QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPS
MCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRA
ILLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI
LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGP
QLKSLFARSGRARWKA

Sequences:

>Translated_816_residues
MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRC
GTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGG
LFGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS
HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDA
LLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVA
GLANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR
QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPS
MCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRA
ILLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI
LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGP
QLKSLFARSGRARWKA
>Mature_815_residues
ADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRCG
TVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGL
FGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGSH
SVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDAL
LARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAG
LANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYRQ
QNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPSM
CAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAI
LLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYIL
DQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGPQ
LKSLFARSGRARWKA

Specific function: Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 acyl carrier domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010071
- InterPro:   IPR009081
- InterPro:   IPR020845
- InterPro:   IPR000873
- InterPro:   IPR000794
- InterPro:   IPR001242
- InterPro:   IPR018201
- InterPro:   IPR014031
- InterPro:   IPR014030
- InterPro:   IPR016040
- InterPro:   IPR006163
- InterPro:   IPR020842
- InterPro:   IPR020841
- InterPro:   IPR020807
- InterPro:   IPR013968
- InterPro:   IPR020806
- InterPro:   IPR006162
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]

EC number: NA

Molecular weight: Translated: 88546; Mature: 88414

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVV
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEE
VPAPGDRDIQAVLAAIRSRCGTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKH
ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
LKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGLFGLSKSLHKEWPNVYCRAV
HHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEHH
DLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
HLAARADKPEPRKIRRDLDALLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAGLANLLRWVPAGQLEQLILF
HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMS
HCCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LAGNPFVRDHRIGEHPVLPSMCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPE
CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCEEEEEHHHHHHHHEEECCCCCC
TLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAILLAELPSSTQSHRSDCARE
EEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHC
GSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI
CCEEEEEEECCCEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHCCHHH
LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHH
YDAGGRLCVRMQGMHLTMGPQLKSLFARSGRARWKA
CCCCCEEEEEEECEEEECCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVV
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEE
VPAPGDRDIQAVLAAIRSRCGTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKH
ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH
LKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGLFGLSKSLHKEWPNVYCRAV
HHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEHH
DLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVA
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
HLAARADKPEPRKIRRDLDALLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH
ATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAGLANLLRWVPAGQLEQLILF
HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH
QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMS
HCCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
LAGNPFVRDHRIGEHPVLPSMCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPE
CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCEEEEEHHHHHHHHEEECCCCCC
TLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAILLAELPSSTQSHRSDCARE
EEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHC
GSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI
CCEEEEEEECCCEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHCCHHH
LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAA
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHH
YDAGGRLCVRMQGMHLTMGPQLKSLFARSGRARWKA
CCCCCEEEEEEECEEEECCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704258; 9384377; 10568751 [H]