Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is pksJ [H]
Identifier: 37521527
GI number: 37521527
Start: 2094402
End: 2096852
Strand: Reverse
Name: pksJ [H]
Synonym: gll1958
Alternate gene names: 37521527
Gene position: 2096852-2094402 (Counterclockwise)
Preceding gene: 37521528
Following gene: 37521526
Centisome position: 45.01
GC content: 66.46
Gene sequence:
>2451_bases ATGGCCGACCGATTGGAGTACGCCTTGCCCGAAGATGCGACGTGCCTGCTGAGCGAAGACGGTTCGCAGCTGACGCCCCG GCTGGCTGCGGCCCTCAGCGCCCGCGGCTGGCGGGTGGTCGTGCTCGCCTGGGCGGAAGCGGCCGGACCGGCTTTGCCCG CCGGGATCGAGCGGGTGGTGGTGCCCGCCCCGGGCGATCGCGACATTCAAGCGGTCCTCGCAGCGATCCGCTCGCGCTGC GGCACGGTGCGCGCCTTTGTGCACCTGCACCCGCCGCTGCCGATTGTCGAGCGGAGTACCATCGCGTTTTTGCCGTCTGA GGCCGCTTTGATTGAGGGCGTTTTTTATCTGGCCAAACACCTGAAAAGCGCGCTGGAGGAAGCGGCCCGCAGCGCCCGCA GCTGTTTTGTGACGGTCGCGCGCCTGGACGGCCGGTTGGGCGTAGAGCACAGCCGTCCCTGCAGTGCCCTTGCCGGCGGT CTGTTCGGGTTGAGCAAAAGTCTGCACAAAGAATGGCCGAACGTTTACTGCCGGGCGGTGGATCTCTGCCCGGATTTGGC CGTGGACGCCGCTGTGGAATGTCTGCTGGCGGAGCTGGACGACCCGGACCGGCGGCTTGTAGAAGTGGGACAGACCGGCG AGCAGCGCACAACCCTCACTTGCGCGCCGGAGGAGGAGGGGGGCGAGCCGGCCGTCGCGCCGGTCGCCCCCCTCGGTTCG CACTCCGTCTTGCTGGTGAGCGGCGGTGCCAGGGGAATCACTGCCCAATGCGTGGTGCACCTGGCCAAGCTCTACCGCTG CCGGTTCGTGTTACTTGGGCGCTCGGCTATCGACGGACCCGAACCGCCGTGGGCAGCCGATGGCCACGGCGAACAGCAAC TGCAGGAGCGGTTGGTGGCCCACCTCGCCGCGCGGGCAGACAAGCCCGAACCGCGCAAAATTCGCCGCGACCTCGACGCC TTGCTGGCGCGGCGCGAGGTGGTGGCCACCCTGGAGGCGGTTGAGCGGGCGGGTGGAAAGGCCTTCTACTACAGCGTCGA TGTGAGCGATCCGCTCGCCCTCGAAGCGGTCATCCGCTCGGCCACCGCCCAGGCTGGGCCGATCACCGGCCTCATCCACG GGGCCGGGAACATCGCAGACAAGCGCATCGAGCACAAAACCGAGCAAGATTTTCGACGGGTTTACGGCGCCAAGGTGGCC GGTTTGGCGAACCTGCTGCGGTGGGTGCCGGCCGGGCAGCTCGAACAGCTCATCTTGTTTTCTTCGGTGGTCGGGTTTTT TGGCAACATTGGTCAAAGCGACTACGCCATCGCCAACGAAATCCTCAACAAAGTCGCCCACGCGGTGAAGTACCATCACC CCGATTGCCACGTGACGGCAATCGACTGGGGGGCCTGGGACGGGGGTATGGTCACCCCGGAACTGATCCGCGCCTACCGG CAGCAAAATTTGCCGCTGCCGCGCATTGCGATCGAGACCGGCGTCGGGTTGCTTGCCGGGCAACTTCTACCCAAACGCCG CGAGCAGGTGCAGGTGGTGATCGGTGAGCCGCTCGCCCCCGCCGCGCCGCAGGCACCGCTCTGCGAGCAACGCCACTGGC GGATTGCCCGCCGAATGAGCCTGGCCGGCAACCCGTTCGTCCGCGACCATAGAATCGGCGAGCACCCCGTGCTGCCCTCG ATGTGCGCAGCGGGCTGGATGGTCGATGGGTGCGAGCAACTGTTCGCCGGCTACCGCTGCTTGCAATTGCAAGATTTTCG AGTGCTCAAGGGGATCGTCTTCGATGGCGGCGAACCGGAAACGCTGTATCTGGAGATCGCGGAGCCTGGCCAGAGGCAAT CGGGCCGCATAGAACTCGACACGCTGATCTGGAGCCAGGCCGGGCCGGGACCGGCTCGCCGCCATTTCAGCGGCCGGGCG ATCCTGCTTGCCGAGTTGCCCTCCTCTACCCAGTCGCACCGTTCGGACTGTGCCCGAGAAGGCTCCTTTGCCGTGGCGCC GCTGTACGAAGATGGGACGCTCTTTCACGGCCCGAGCTTCCGGGGGCTTGAAGCGGTTTTGAGCCTCGATGCCCGCCGGG TGGAGGTCCGCTGTCGGGTGTTGCCGCCGGACGCGGCTTGCCAGGGCCAATTTCCCGCCCGTGCGTTCAATCCCTATATT CTGGACCAGTTGCTGCAAGCGGCCCTCGTCTTCGTCCAGCACCACCACCGGCAGGGATGCTTGCCCGCTCGGGTGGAGTG CATCGAACAGTTTCGCAGCCCGGCTTTTGGCGAAGTGTTCACGATCGATTTCGAGTGCACCGCCCACTCCGAGGCGGGCG TCGTCGGCGAGGCGGCCGCCTACGACGCCGGCGGCCGCCTGTGCGTCCGGATGCAGGGAATGCACCTGACGATGGGTCCG CAACTGAAGTCCCTGTTTGCCCGATCCGGGAGGGCGCGATGGAAAGCATAG
Upstream 100 bases:
>100_bases AGGGAGCGGCCAAAAAAAAGTCCCCGGCCGTCCTGCCGACGAGGTTGGTGAGCTGAACTGGACCCCCGAGCGGCGCATCG CCGTTCTGGAGCGCTTGCCC
Downstream 100 bases:
>100_bases CCATCATCGGGATAGCCTGTCTGTTTCCCGGTGCAAACGATCCGGCCCAGTTCTGGCGGAATTTGCTCGATGGGCGGTGT GAGCCGGGCGACTGCGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: PKS [H]
Number of amino acids: Translated: 816; Mature: 815
Protein sequence:
>816_residues MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRC GTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGG LFGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDA LLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVA GLANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPS MCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRA ILLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGP QLKSLFARSGRARWKA
Sequences:
>Translated_816_residues MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRC GTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGG LFGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDA LLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVA GLANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPS MCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRA ILLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGP QLKSLFARSGRARWKA >Mature_815_residues ADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVVVPAPGDRDIQAVLAAIRSRCG TVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKHLKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGL FGLSKSLHKEWPNVYCRAVDLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGSH SVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVAHLAARADKPEPRKIRRDLDAL LARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRSATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAG LANLLRWVPAGQLEQLILFSSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYRQ QNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMSLAGNPFVRDHRIGEHPVLPSM CAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPETLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAI LLAELPSSTQSHRSDCAREGSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYIL DQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAAYDAGGRLCVRMQGMHLTMGPQ LKSLFARSGRARWKA
Specific function: Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 acyl carrier domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR000794 - InterPro: IPR001242 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016040 - InterPro: IPR006163 - InterPro: IPR020842 - InterPro: IPR020841 - InterPro: IPR020807 - InterPro: IPR013968 - InterPro: IPR020806 - InterPro: IPR006162 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C; PF08659 KR; PF00550 PP-binding [H]
EC number: NA
Molecular weight: Translated: 88546; Mature: 88414
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVV CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEE VPAPGDRDIQAVLAAIRSRCGTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKH ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH LKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGLFGLSKSLHKEWPNVYCRAV HHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEHH DLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS HCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVA CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHH HLAARADKPEPRKIRRDLDALLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH ATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAGLANLLRWVPAGQLEQLILF HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMS HCCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH LAGNPFVRDHRIGEHPVLPSMCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPE CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCEEEEEHHHHHHHHEEECCCCCC TLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAILLAELPSSTQSHRSDCARE EEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHC GSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI CCEEEEEEECCCEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHCCHHH LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHH YDAGGRLCVRMQGMHLTMGPQLKSLFARSGRARWKA CCCCCEEEEEEECEEEECCHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADRLEYALPEDATCLLSEDGSQLTPRLAAALSARGWRVVVLAWAEAAGPALPAGIERVV CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEE VPAPGDRDIQAVLAAIRSRCGTVRAFVHLHPPLPIVERSTIAFLPSEAALIEGVFYLAKH ECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHH LKSALEEAARSARSCFVTVARLDGRLGVEHSRPCSALAGGLFGLSKSLHKEWPNVYCRAV HHHHHHHHHHHHHHHEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEHH DLCPDLAVDAAVECLLAELDDPDRRLVEVGQTGEQRTTLTCAPEEEGGEPAVAPVAPLGS HCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC HSVLLVSGGARGITAQCVVHLAKLYRCRFVLLGRSAIDGPEPPWAADGHGEQQLQERLVA CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHH HLAARADKPEPRKIRRDLDALLARREVVATLEAVERAGGKAFYYSVDVSDPLALEAVIRS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH ATAQAGPITGLIHGAGNIADKRIEHKTEQDFRRVYGAKVAGLANLLRWVPAGQLEQLILF HCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH SSVVGFFGNIGQSDYAIANEILNKVAHAVKYHHPDCHVTAIDWGAWDGGMVTPELIRAYR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHH QQNLPLPRIAIETGVGLLAGQLLPKRREQVQVVIGEPLAPAAPQAPLCEQRHWRIARRMS HCCCCCCHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH LAGNPFVRDHRIGEHPVLPSMCAAGWMVDGCEQLFAGYRCLQLQDFRVLKGIVFDGGEPE CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHCCEEEEEHHHHHHHHEEECCCCCC TLYLEIAEPGQRQSGRIELDTLIWSQAGPGPARRHFSGRAILLAELPSSTQSHRSDCARE EEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHC GSFAVAPLYEDGTLFHGPSFRGLEAVLSLDARRVEVRCRVLPPDAACQGQFPARAFNPYI CCEEEEEEECCCEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHCCHHH LDQLLQAALVFVQHHHRQGCLPARVECIEQFRSPAFGEVFTIDFECTAHSEAGVVGEAAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHH YDAGGRLCVRMQGMHLTMGPQLKSLFARSGRARWKA CCCCCEEEEEEECEEEECCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7704258; 9384377; 10568751 [H]