Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521507
Identifier: 37521507
GI number: 37521507
Start: 2060880
End: 2061839
Strand: Reverse
Name: 37521507
Synonym: gll1938
Alternate gene names: NA
Gene position: 2061839-2060880 (Counterclockwise)
Preceding gene: 37521508
Following gene: 37521506
Centisome position: 44.25
GC content: 64.06
Gene sequence:
>960_bases ATGTCAGAGCCTGCCGAGCAGCCCGAGTCCGTCAAGGGCTGGACCCGTTTGACCCGACGGCGAGACGTTCTTGACGATCC GTACATTCATCGCTATCAGAGGCGGCATTTCTTTTTCTTCGATATTCTGCCTGCGATCGGGACCGTGGCGGCGGTGGCAC TGTCGTGGGTCTGGCCCCCCGGCCCCATCGAGGGGAGTTTGTTGCTGGGTCTGTGGCTGGTGACCGGCTTCGGCGTCACC GTCGGCTACCATCGTCTGTTTACCCACCGCTCCTTCAGCGCGGCCCCCTGGGTCCAGGCGCTGCTGGCCGTCTCCGGCTC GATGGCCGGCCAGGGCTCGGTCATCTCCTGGGTGGCGCTGCACCGGCGCCACCACGAATTGAGCGACCAGCCCGGCGATC CCCATTCGCCCAACCTGCACGGTCAAGATCCAGTCGGCCGCCTGCGCGGTCTGCTGCACGCCCATCTGCTGTGGATGCGG CAGCACGAGTATCCCAACGTCGTGTGCTATGCCTCAGATTTGTTGCGCGACCGGTCGTTGCTGCAGGTCAACGGTCTGTA CCTCTGGTGGGTGCTGCTGGGCCTCGCTATCCCCGCGCTGGTGGGCTGGTGGCTCCACGGCCATGTTGCCGGGCTGCTGC TCGGATTTCTCTGGGGTGGGGCGGTGCGCATGTTTGTCCTGGGCAATATCATCTGGTCAATCAATTCTTTTTTGCACAGC TTCGGCCCCCGGCTTTTTGCGACGCGCGAGCACAGCCGCAACAGCGGCTGGTTGGCCCTGGCGAGCTTTGGCGAATCCTG GCACAACAACCACCACGCCTTTCCCACCTCCGCTTCCTTCGGCCTGGACTGGTACCGGCTCGATCCCGGCTACTGGCTCA TCTGGCTTTTGGCGCGACTGGGGTTGGCCTGGGATGTGAAGGTGCCCTCCGAGGAGCAAATCCGGCTGAAGCGGGCTTGA
Upstream 100 bases:
>100_bases GCAGTCCGCAAGCGTTTGTCCACGAACAAGTGCAGTTGCAGCTTGTCCTGGCCAGAAATTGATCCGGCCCGTCTTCTTAC CCATCAGGATATCCTCCACC
Downstream 100 bases:
>100_bases TCGACAGCTTGCAACGACTACAGACAAGGAGTTTTGCCATGACGGACATCCCCGTTTCTCAATCTGCCATCGCCGAGTGG ATGAAAGCCTATATCGGCGA
Product: fatty acid desaturase
Products: NA
Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Stearoyl/Acyl-CoA Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein; Fatty-Acid Desaturase-Like Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSEPAEQPESVKGWTRLTRRRDVLDDPYIHRYQRRHFFFFDILPAIGTVAAVALSWVWPPGPIEGSLLLGLWLVTGFGVT VGYHRLFTHRSFSAAPWVQALLAVSGSMAGQGSVISWVALHRRHHELSDQPGDPHSPNLHGQDPVGRLRGLLHAHLLWMR QHEYPNVVCYASDLLRDRSLLQVNGLYLWWVLLGLAIPALVGWWLHGHVAGLLLGFLWGGAVRMFVLGNIIWSINSFLHS FGPRLFATREHSRNSGWLALASFGESWHNNHHAFPTSASFGLDWYRLDPGYWLIWLLARLGLAWDVKVPSEEQIRLKRA
Sequences:
>Translated_319_residues MSEPAEQPESVKGWTRLTRRRDVLDDPYIHRYQRRHFFFFDILPAIGTVAAVALSWVWPPGPIEGSLLLGLWLVTGFGVT VGYHRLFTHRSFSAAPWVQALLAVSGSMAGQGSVISWVALHRRHHELSDQPGDPHSPNLHGQDPVGRLRGLLHAHLLWMR QHEYPNVVCYASDLLRDRSLLQVNGLYLWWVLLGLAIPALVGWWLHGHVAGLLLGFLWGGAVRMFVLGNIIWSINSFLHS FGPRLFATREHSRNSGWLALASFGESWHNNHHAFPTSASFGLDWYRLDPGYWLIWLLARLGLAWDVKVPSEEQIRLKRA >Mature_318_residues SEPAEQPESVKGWTRLTRRRDVLDDPYIHRYQRRHFFFFDILPAIGTVAAVALSWVWPPGPIEGSLLLGLWLVTGFGVTV GYHRLFTHRSFSAAPWVQALLAVSGSMAGQGSVISWVALHRRHHELSDQPGDPHSPNLHGQDPVGRLRGLLHAHLLWMRQ HEYPNVVCYASDLLRDRSLLQVNGLYLWWVLLGLAIPALVGWWLHGHVAGLLLGFLWGGAVRMFVLGNIIWSINSFLHSF GPRLFATREHSRNSGWLALASFGESWHNNHHAFPTSASFGLDWYRLDPGYWLIWLLARLGLAWDVKVPSEEQIRLKRA
Specific function: Unknown
COG id: COG1398
COG function: function code I; Fatty-acid desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI148596961, Length=258, Percent_Identity=31.0077519379845, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI53759151, Length=258, Percent_Identity=29.4573643410853, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540878, Length=255, Percent_Identity=30.1960784313725, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17561776, Length=262, Percent_Identity=27.8625954198473, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17561774, Length=252, Percent_Identity=30.952380952381, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321383, Length=248, Percent_Identity=32.258064516129, Blast_Score=126, Evalue=5e-30, Organism=Drosophila melanogaster, GI21358571, Length=250, Percent_Identity=30, Blast_Score=111, Evalue=7e-25, Organism=Drosophila melanogaster, GI24646500, Length=277, Percent_Identity=25.9927797833935, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24646303, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646299, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646305, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646301, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646297, Length=262, Percent_Identity=29.7709923664122, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24646295, Length=259, Percent_Identity=27.7992277992278, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI21358573, Length=255, Percent_Identity=30.5882352941176, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24662393, Length=261, Percent_Identity=28.735632183908, Blast_Score=89, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36266; Mature: 36135
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPAEQPESVKGWTRLTRRRDVLDDPYIHRYQRRHFFFFDILPAIGTVAAVALSWVWPP CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPIEGSLLLGLWLVTGFGVTVGYHRLFTHRSFSAAPWVQALLAVSGSMAGQGSVISWVAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH HRRHHELSDQPGDPHSPNLHGQDPVGRLRGLLHAHLLWMRQHEYPNVVCYASDLLRDRSL HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHH LQVNGLYLWWVLLGLAIPALVGWWLHGHVAGLLLGFLWGGAVRMFVLGNIIWSINSFLHS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGPRLFATREHSRNSGWLALASFGESWHNNHHAFPTSASFGLDWYRLDPGYWLIWLLARL CCCCEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH GLAWDVKVPSEEQIRLKRA CCEEEECCCCHHHHEEECC >Mature Secondary Structure SEPAEQPESVKGWTRLTRRRDVLDDPYIHRYQRRHFFFFDILPAIGTVAAVALSWVWPP CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GPIEGSLLLGLWLVTGFGVTVGYHRLFTHRSFSAAPWVQALLAVSGSMAGQGSVISWVAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH HRRHHELSDQPGDPHSPNLHGQDPVGRLRGLLHAHLLWMRQHEYPNVVCYASDLLRDRSL HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCHH LQVNGLYLWWVLLGLAIPALVGWWLHGHVAGLLLGFLWGGAVRMFVLGNIIWSINSFLHS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGPRLFATREHSRNSGWLALASFGESWHNNHHAFPTSASFGLDWYRLDPGYWLIWLLARL CCCCEEEECCCCCCCCEEEEEHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH GLAWDVKVPSEEQIRLKRA CCEEEECCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA