Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521467
Identifier: 37521467
GI number: 37521467
Start: 2017887
End: 2019209
Strand: Reverse
Name: 37521467
Synonym: gll1898
Alternate gene names: NA
Gene position: 2019209-2017887 (Counterclockwise)
Preceding gene: 37521468
Following gene: 37521466
Centisome position: 43.34
GC content: 65.46
Gene sequence:
>1323_bases ATGATCCACCCACTTGCCTCCCCCACCGCCGCGCCCGGCCAGATCGCCCCCGGCGCCCACTCCCTCGGCACCATCGCCCA ACTGGACATCGACGATGTCGATCAAATCGTCGGTGCCCTGGCCTGGTACGGGGGGCAAATCTACTTTGCCGGCCTCTACA TCGACCGCGACGTGCAGGATTTTCGGCGCATCGTCCGCTTCGACCCGCAGACCCGGGGTTGGCAGACGGTGCACACCTCC CTGGCCATCAACACCAAGCGGCGCAGCGGCCCGGGGAACATGCTCGATACGTTCTTCCCGGACAATCCGACCGAGGAGCA ATCGAAGGACAAGCTTACCGACGCCCTGGGGGTGAACCTGGCGGGCGAGCAGGCCCTGGAGACGGGCCGCAATGTCTATT GCTGTCTATTTGAAGAGCGGGGTCGCTTGGTGGCGAGTCTCTCTTCGCCCCTGGGGGGCGAGGTGGCCATTAGCGAAGAT GGCGGACCGTGGCGGACAACATTCGATCTTGTGCCTGCGAACGGCCACACCTTTCACCAGCCTGTCCCGTTTGGGGGCGG GGTGGTGGCCCTGGCCACCGGCCTCAGCCAGAATGCGCCGCCCCTACTGCGCGGTGAGGCTGTGGACTCGGCCCTCTGGG AGGAAGTGCCCGTACCGGGATTTAAGGAACAAGGCAACGAACTGGCCTGCCGCGCGGCAGTATTCGCGGATTCACTCTAT ATAGGAACGCGCAACCTGGAGCGCGGTTTTCAGTTGTGGCGGCTGGGGGCGCTCGCCGCTCAGCCCGGCGATTTCGAGCA GGTGATCGCCAGCGGCGCCTATCTATTTAGCGACAACCAGCAGGTGGCGGCGATGGCCCACTTCGGGGGCTGCCTTTACT TGGCAGGCGGCAAATCCCACCGCTCGCTGCGCGCCCACCAGGTCGCCAATGTCGAAATCTTCCGCGTCAATCCCGACGGC GGTTGGGATCTGATCGTGGGCAAGCCGCGCTTTTCGCCCTCGGGGCTGAAGGTGCCTTTCTCGGCGATGGGTCCGGGCTT CGACGACGGTACGGCCGTGCTGCAGTGCCTGGTGGCCCACGCGGGTTACCTGTGCGCGGGTTTCACCAGCCGGGGCGCCT TCAAGTTGTTCGTCACCCCGGACGGTGAGCAGTGGACGGAAAAACCCCTGGGGAATTTCGGGGGCGAGTTGGTGGCGGCC CTCTCGACCCCCGAGGGGTTGGTGCTCCTCTTCAACCCGCGAGCCCAGGGACAGCCCCCGGCCAAAAAAGGCGAGCCGCT GCCTTCGATTGCCCTCGAAGCCTGGCGCTTCCCCCTGGACTGA
Upstream 100 bases:
>100_bases GGCCGTCGACACCGACACCGCCCGCGAGATCCAGGAGCTGGCCCAGCAGATGGGGTACTAAAAGCGCGAGCCGTTTGACA AAAAGTGAGGTTTCGCTCCC
Downstream 100 bases:
>100_bases GCCGTTTTTTTGCCCTTGAACGACGTTTCTTGAGGAAATTCGCCATGCAAACCACCACGGAAAAATTCGGAACGACCTAC GAAGCCGCCCCCGGCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIHPLASPTAAPGQIAPGAHSLGTIAQLDIDDVDQIVGALAWYGGQIYFAGLYIDRDVQDFRRIVRFDPQTRGWQTVHTS LAINTKRRSGPGNMLDTFFPDNPTEEQSKDKLTDALGVNLAGEQALETGRNVYCCLFEERGRLVASLSSPLGGEVAISED GGPWRTTFDLVPANGHTFHQPVPFGGGVVALATGLSQNAPPLLRGEAVDSALWEEVPVPGFKEQGNELACRAAVFADSLY IGTRNLERGFQLWRLGALAAQPGDFEQVIASGAYLFSDNQQVAAMAHFGGCLYLAGGKSHRSLRAHQVANVEIFRVNPDG GWDLIVGKPRFSPSGLKVPFSAMGPGFDDGTAVLQCLVAHAGYLCAGFTSRGAFKLFVTPDGEQWTEKPLGNFGGELVAA LSTPEGLVLLFNPRAQGQPPAKKGEPLPSIALEAWRFPLD
Sequences:
>Translated_440_residues MIHPLASPTAAPGQIAPGAHSLGTIAQLDIDDVDQIVGALAWYGGQIYFAGLYIDRDVQDFRRIVRFDPQTRGWQTVHTS LAINTKRRSGPGNMLDTFFPDNPTEEQSKDKLTDALGVNLAGEQALETGRNVYCCLFEERGRLVASLSSPLGGEVAISED GGPWRTTFDLVPANGHTFHQPVPFGGGVVALATGLSQNAPPLLRGEAVDSALWEEVPVPGFKEQGNELACRAAVFADSLY IGTRNLERGFQLWRLGALAAQPGDFEQVIASGAYLFSDNQQVAAMAHFGGCLYLAGGKSHRSLRAHQVANVEIFRVNPDG GWDLIVGKPRFSPSGLKVPFSAMGPGFDDGTAVLQCLVAHAGYLCAGFTSRGAFKLFVTPDGEQWTEKPLGNFGGELVAA LSTPEGLVLLFNPRAQGQPPAKKGEPLPSIALEAWRFPLD >Mature_440_residues MIHPLASPTAAPGQIAPGAHSLGTIAQLDIDDVDQIVGALAWYGGQIYFAGLYIDRDVQDFRRIVRFDPQTRGWQTVHTS LAINTKRRSGPGNMLDTFFPDNPTEEQSKDKLTDALGVNLAGEQALETGRNVYCCLFEERGRLVASLSSPLGGEVAISED GGPWRTTFDLVPANGHTFHQPVPFGGGVVALATGLSQNAPPLLRGEAVDSALWEEVPVPGFKEQGNELACRAAVFADSLY IGTRNLERGFQLWRLGALAAQPGDFEQVIASGAYLFSDNQQVAAMAHFGGCLYLAGGKSHRSLRAHQVANVEIFRVNPDG GWDLIVGKPRFSPSGLKVPFSAMGPGFDDGTAVLQCLVAHAGYLCAGFTSRGAFKLFVTPDGEQWTEKPLGNFGGELVAA LSTPEGLVLLFNPRAQGQPPAKKGEPLPSIALEAWRFPLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47094; Mature: 47094
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHPLASPTAAPGQIAPGAHSLGTIAQLDIDDVDQIVGALAWYGGQIYFAGLYIDRDVQD CCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEEEEEECCCHHH FRRIVRFDPQTRGWQTVHTSLAINTKRRSGPGNMLDTFFPDNPTEEQSKDKLTDALGVNL HHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AGEQALETGRNVYCCLFEERGRLVASLSSPLGGEVAISEDGGPWRTTFDLVPANGHTFHQ CCHHHHHCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCEECC PVPFGGGVVALATGLSQNAPPLLRGEAVDSALWEEVPVPGFKEQGNELACRAAVFADSLY CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEHHHHHHCEEE IGTRNLERGFQLWRLGALAAQPGDFEQVIASGAYLFSDNQQVAAMAHFGGCLYLAGGKSH EECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCEEEEEECCCEEEEECCCCC RSLRAHQVANVEIFRVNPDGGWDLIVGKPRFSPSGLKVPFSAMGPGFDDGTAVLQCLVAH CCCHHEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH AGYLCAGFTSRGAFKLFVTPDGEQWTEKPLGNFGGELVAALSTPEGLVLLFNPRAQGQPP CCCEEECCCCCCEEEEEECCCCCHHHHCHHHCCCCCEEEEECCCCCEEEEECCCCCCCCC AKKGEPLPSIALEAWRFPLD CCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MIHPLASPTAAPGQIAPGAHSLGTIAQLDIDDVDQIVGALAWYGGQIYFAGLYIDRDVQD CCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCEEEEEEEEECCCHHH FRRIVRFDPQTRGWQTVHTSLAINTKRRSGPGNMLDTFFPDNPTEEQSKDKLTDALGVNL HHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AGEQALETGRNVYCCLFEERGRLVASLSSPLGGEVAISEDGGPWRTTFDLVPANGHTFHQ CCHHHHHCCCCEEEEEEECCCCEEEECCCCCCCEEEEECCCCCEEEEEEEEECCCCEECC PVPFGGGVVALATGLSQNAPPLLRGEAVDSALWEEVPVPGFKEQGNELACRAAVFADSLY CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEHHHHHHCEEE IGTRNLERGFQLWRLGALAAQPGDFEQVIASGAYLFSDNQQVAAMAHFGGCLYLAGGKSH EECCCHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEECCCCEEEEEECCCEEEEECCCCC RSLRAHQVANVEIFRVNPDGGWDLIVGKPRFSPSGLKVPFSAMGPGFDDGTAVLQCLVAH CCCHHEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH AGYLCAGFTSRGAFKLFVTPDGEQWTEKPLGNFGGELVAALSTPEGLVLLFNPRAQGQPP CCCEEECCCCCCEEEEEECCCCCHHHHCHHHCCCCCEEEEECCCCCEEEEECCCCCCCCC AKKGEPLPSIALEAWRFPLD CCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA