Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
---|---|
Accession | NC_005125 |
Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is yajO [H]
Identifier: 37521463
GI number: 37521463
Start: 2014674
End: 2015717
Strand: Reverse
Name: yajO [H]
Synonym: gll1894
Alternate gene names: 37521463
Gene position: 2015717-2014674 (Counterclockwise)
Preceding gene: 37521464
Following gene: 37521461
Centisome position: 43.26
GC content: 62.74
Gene sequence:
>1044_bases ATGGAAGTCACGCGGATGGCAGCAAAAGGGGAGCGCAGGCGATTTATCCAGCGTTTCGCGGCGGGGGCGGCGATGCTTGC GGCCGGTCAGGCGCTGACGGCACAGAGGGGGCAGGCCCAGGGGGCAATCCCGCGCCGTCCGTTCGGCAAGACGGGCGTGC AGGTGTCGATTATCGGATTGGGCGGCTACCACCTGGGTTCGGCCAAAAGCGATGCGGAAGCCGTCCGTATCGTCCATGCG GCGATGGATGCGGGGGTGAATTTCCTCGACAACGCCTGGGAGTATCGCGACGGCCTGAGCGAGGAGCGCATGGGCAAGGC GTTGCGCGGCGGGAGGCGGCAGCAGGCATTGTTGATGAGCAAAGTCTGCACCCACGGCAGGGACCGCAAAGTGGCCATGG GCCAGCTCGAAGAATCCCTCAAACGGCTGGGGACCGATTATCTCGATCTCTGGCAGGTCCACGAAGTGATCTACGACAAC GACCCGGAGCTGCACTTTGCCCCGGGCGGTGTCATCGAAGCGCTGGAGCAGGCCAAAAAGGAAGGCAAAGTCCGCTACGT CGGCTTTACCGGTCACAAAGACCCGGCGATTCATCTGAAAATGCTCGACAAAGGTTATCCCTTCGACGCCTGCCAGTTGC CCCTCAACTGCTTCGATGCGAGCTTTCGCTCTTTCGAGCAGCAGGTGCTGCCGCGCCTGAATGCCCTGGGGATTGCCGCC ATCGGCATGAAAAGTTTCGGCGGCAGCGGCGAAATGCTCAAAAAAGATCTGCTCTCCCCGGCGGACGCGCTGCGCTACGC GATGAGCCTGCCGATCGCCACCACCGTAAGCGGAATCGAATCGACGGCGATCTTGGAGCAAAATCTGCGGGTGGCCCGGG GCTTCGTCCCCTTCGACCAGAAGCAACTGGCGGCGATGCGCTCGCAGTACGCGACGCTCGCAGCCGACGGCCGCTTCGAG CTGTACAAGACTTCCAAAAAGTACGACGGCCCCCCCGGCCGCGAGCAGCACGGTTTCCCCGCGGACAAAGAACTGGCTTC TTGA
Upstream 100 bases:
>100_bases TCAAGCACGAGCACCAGAGGCGCTACGGTTGACTAAGCGTGGTTCCACCGCGGGGAAGACGCTCGTTGGCGGTAATGGAT GGCAAAGTGACTCCAACAGC
Downstream 100 bases:
>100_bases GCGAACGGCACCTCACCCCGGTTGGCCGTTGCCACGCTCGCGGTCGCGACGCAAAATGTAGTCGTTGATGGCTTCTTGGC GGCGGTTGAACGCCCGCAAC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MEVTRMAAKGERRRFIQRFAAGAAMLAAGQALTAQRGQAQGAIPRRPFGKTGVQVSIIGLGGYHLGSAKSDAEAVRIVHA AMDAGVNFLDNAWEYRDGLSEERMGKALRGGRRQQALLMSKVCTHGRDRKVAMGQLEESLKRLGTDYLDLWQVHEVIYDN DPELHFAPGGVIEALEQAKKEGKVRYVGFTGHKDPAIHLKMLDKGYPFDACQLPLNCFDASFRSFEQQVLPRLNALGIAA IGMKSFGGSGEMLKKDLLSPADALRYAMSLPIATTVSGIESTAILEQNLRVARGFVPFDQKQLAAMRSQYATLAADGRFE LYKTSKKYDGPPGREQHGFPADKELAS
Sequences:
>Translated_347_residues MEVTRMAAKGERRRFIQRFAAGAAMLAAGQALTAQRGQAQGAIPRRPFGKTGVQVSIIGLGGYHLGSAKSDAEAVRIVHA AMDAGVNFLDNAWEYRDGLSEERMGKALRGGRRQQALLMSKVCTHGRDRKVAMGQLEESLKRLGTDYLDLWQVHEVIYDN DPELHFAPGGVIEALEQAKKEGKVRYVGFTGHKDPAIHLKMLDKGYPFDACQLPLNCFDASFRSFEQQVLPRLNALGIAA IGMKSFGGSGEMLKKDLLSPADALRYAMSLPIATTVSGIESTAILEQNLRVARGFVPFDQKQLAAMRSQYATLAADGRFE LYKTSKKYDGPPGREQHGFPADKELAS >Mature_347_residues MEVTRMAAKGERRRFIQRFAAGAAMLAAGQALTAQRGQAQGAIPRRPFGKTGVQVSIIGLGGYHLGSAKSDAEAVRIVHA AMDAGVNFLDNAWEYRDGLSEERMGKALRGGRRQQALLMSKVCTHGRDRKVAMGQLEESLKRLGTDYLDLWQVHEVIYDN DPELHFAPGGVIEALEQAKKEGKVRYVGFTGHKDPAIHLKMLDKGYPFDACQLPLNCFDASFRSFEQQVLPRLNALGIAA IGMKSFGGSGEMLKKDLLSPADALRYAMSLPIATTVSGIESTAILEQNLRVARGFVPFDQKQLAAMRSQYATLAADGRFE LYKTSKKYDGPPGREQHGFPADKELAS
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI87081735, Length=211, Percent_Identity=30.3317535545024, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1789199, Length=175, Percent_Identity=30.8571428571429, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI212645785, Length=158, Percent_Identity=32.2784810126582, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24646155, Length=157, Percent_Identity=34.3949044585987, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI24646159, Length=159, Percent_Identity=33.9622641509434, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 37989; Mature: 37989
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTRMAAKGERRRFIQRFAAGAAMLAAGQALTAQRGQAQGAIPRRPFGKTGVQVSIIGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE GGYHLGSAKSDAEAVRIVHAAMDAGVNFLDNAWEYRDGLSEERMGKALRGGRRQQALLMS CCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH KVCTHGRDRKVAMGQLEESLKRLGTDYLDLWQVHEVIYDNDPELHFAPGGVIEALEQAKK HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH EGKVRYVGFTGHKDPAIHLKMLDKGYPFDACQLPLNCFDASFRSFEQQVLPRLNALGIAA CCCEEEEEECCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGMKSFGGSGEMLKKDLLSPADALRYAMSLPIATTVSGIESTAILEQNLRVARGFVPFDQ HHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KQLAAMRSQYATLAADGRFELYKTSKKYDGPPGREQHGFPADKELAS HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MEVTRMAAKGERRRFIQRFAAGAAMLAAGQALTAQRGQAQGAIPRRPFGKTGVQVSIIGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEE GGYHLGSAKSDAEAVRIVHAAMDAGVNFLDNAWEYRDGLSEERMGKALRGGRRQQALLMS CCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH KVCTHGRDRKVAMGQLEESLKRLGTDYLDLWQVHEVIYDNDPELHFAPGGVIEALEQAKK HHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHH EGKVRYVGFTGHKDPAIHLKMLDKGYPFDACQLPLNCFDASFRSFEQQVLPRLNALGIAA CCCEEEEEECCCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH IGMKSFGGSGEMLKKDLLSPADALRYAMSLPIATTVSGIESTAILEQNLRVARGFVPFDQ HHHHHCCCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KQLAAMRSQYATLAADGRFELYKTSKKYDGPPGREQHGFPADKELAS HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]