Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521411
Identifier: 37521411
GI number: 37521411
Start: 1961826
End: 1962518
Strand: Reverse
Name: 37521411
Synonym: gll1842
Alternate gene names: NA
Gene position: 1962518-1961826 (Counterclockwise)
Preceding gene: 37521412
Following gene: 37521405
Centisome position: 42.12
GC content: 46.75
Gene sequence:
>693_bases ATGTCCAGACTACTGGTACATGTTGAAGGACAAACGGAGGAAACCTTTGTCAATGAAATACTCGGTCCACATCTTCTCAG TCATGGCTATACCAGTATCAGCGCTCGCCTATTAGGTAATTCTCGTAACCGCCTTCGCCGCGGCGGCATTCGTGCTTGGC AGGCAGTTCGCAAAGATATAATCAATCATCTTCAAGGAGATCCCAATTGTTTGTCAACGACGATGGTTGATTACTACGCA CTCCCGCGCACCGGAAATAATGCGTGGCCAGGCTGTGATCAAGCTGCTTTGCTGCCGTTTCCTGAGAACGCAAAGAAAGT TGAATCAGCAATGACTGTCGATGTTTGTAATCAGCTTGGAGATCATTTTGACCCAAAGCGCTTCATACCATACATAATGA TGCATGAGTTTGAAGCATTGCTGTTCAGTGACTGCGAGAAGTTTGCACGAGGAATTGAACGTCCCGATTTAGTTCAAAAC CTGCAGGAAATTCGCCTGCAGTTTGCTACTCCAGAGGAAATCAATGATTCTCCGCAGACGGCGCCATCACAACGTCTGAA AACACTGATGCCTGGCTACAGCAAGATTCTATTCGGAAAATTAGCCATCTTGGAAATTGGTCTCGATGCCATCCGTGAAG AGTGCCCGCATTTTAAACAATGGCTGGGGCAACTGGAAACTTGCTTGAGATAG
Upstream 100 bases:
>100_bases TTGGAGCCGGAAAAACTTGCAGCCATGCTGCAGGACTATAGTCTTGGCCAGCTTTGGGAGAAGAATGAATTTGGTGGACG TCCTAGGAGAGAATGACCGG
Downstream 100 bases:
>100_bases ACAATCACCTCGATTGCTGATACTGTATTGTCCGCTTGTAAGCACTACGGTTAACATGGGCATGCGTGCCTCCATGTAGT TACAGGAGTTGACACATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSRLLVHVEGQTEETFVNEILGPHLLSHGYTSISARLLGNSRNRLRRGGIRAWQAVRKDIINHLQGDPNCLSTTMVDYYA LPRTGNNAWPGCDQAALLPFPENAKKVESAMTVDVCNQLGDHFDPKRFIPYIMMHEFEALLFSDCEKFARGIERPDLVQN LQEIRLQFATPEEINDSPQTAPSQRLKTLMPGYSKILFGKLAILEIGLDAIREECPHFKQWLGQLETCLR
Sequences:
>Translated_230_residues MSRLLVHVEGQTEETFVNEILGPHLLSHGYTSISARLLGNSRNRLRRGGIRAWQAVRKDIINHLQGDPNCLSTTMVDYYA LPRTGNNAWPGCDQAALLPFPENAKKVESAMTVDVCNQLGDHFDPKRFIPYIMMHEFEALLFSDCEKFARGIERPDLVQN LQEIRLQFATPEEINDSPQTAPSQRLKTLMPGYSKILFGKLAILEIGLDAIREECPHFKQWLGQLETCLR >Mature_229_residues SRLLVHVEGQTEETFVNEILGPHLLSHGYTSISARLLGNSRNRLRRGGIRAWQAVRKDIINHLQGDPNCLSTTMVDYYAL PRTGNNAWPGCDQAALLPFPENAKKVESAMTVDVCNQLGDHFDPKRFIPYIMMHEFEALLFSDCEKFARGIERPDLVQNL QEIRLQFATPEEINDSPQTAPSQRLKTLMPGYSKILFGKLAILEIGLDAIREECPHFKQWLGQLETCLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26133; Mature: 26002
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLVHVEGQTEETFVNEILGPHLLSHGYTSISARLLGNSRNRLRRGGIRAWQAVRKDI CCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH INHLQGDPNCLSTTMVDYYALPRTGNNAWPGCDQAALLPFPENAKKVESAMTVDVCNQLG HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH DHFDPKRFIPYIMMHEFEALLFSDCEKFARGIERPDLVQNLQEIRLQFATPEEINDSPQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCC APSQRLKTLMPGYSKILFGKLAILEIGLDAIREECPHFKQWLGQLETCLR CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC >Mature Secondary Structure SRLLVHVEGQTEETFVNEILGPHLLSHGYTSISARLLGNSRNRLRRGGIRAWQAVRKDI CCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH INHLQGDPNCLSTTMVDYYALPRTGNNAWPGCDQAALLPFPENAKKVESAMTVDVCNQLG HHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHH DHFDPKRFIPYIMMHEFEALLFSDCEKFARGIERPDLVQNLQEIRLQFATPEEINDSPQT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCC APSQRLKTLMPGYSKILFGKLAILEIGLDAIREECPHFKQWLGQLETCLR CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA