Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521372
Identifier: 37521372
GI number: 37521372
Start: 1921587
End: 1923128
Strand: Direct
Name: 37521372
Synonym: glr1803
Alternate gene names: NA
Gene position: 1921587-1923128 (Clockwise)
Preceding gene: 37521371
Following gene: 37521373
Centisome position: 41.24
GC content: 61.48
Gene sequence:
>1542_bases ATGGCGGCTATGGGAAAAAGGTGGGTCGCGTTCGGCTTGGGCCTGGCAGGCTCGCTCGCGGCGGTGGCGGCGGTGGCGCA GCAGGTCAATTCGACGGCTTCGGAGCAGTCTTTGCGGCGGGCAAGGGCGGTGCTCGATGCGGGGATCGAAGCGCTGGGCG GGCCGCAGGTCCTGGAGAAGAGCCGCCGCATCACCCTCAAGGAAGTGGGCCACAGCCTGAACGCCTACCAGAGCGCGAAT CCTGAGCCCCCTTACAGCAAAACCGCCTACGAGGAAGTGACCGTTATCGACTACAAGGACGGCCGATTGTTCAATGAACA AAAGTCGGCTTTTCCCGGAATTGTCGTCTGGAACCGGACGATCATCGACGGCCAGAATGGCTACAACCTGGACATGCGGG CCAAAACGGCGGTGGCGATTGCCGACCCGTCAATTGCCGCCAACCGCGCCATCGTGCGCAAATTGCCCCATTTGCTTTTG CGGGAAGCCCGTAACCGCGTCGATACCTTGCGCTGGGTCGGAGAAGACGACTTTGGGGGCAAAAAACAGCAGGTGATCAC CTACGCCCGCGACGACGGCCGCCAGCTTGCCCTCTACTTCGATGCTCAGACCCGTTTGCTCACCAAGAGCGATTTTTTGT ATACCGACCCGGCGGTGGGCGACTCGCGCTCCGAATTCGTCTATCCGGGCTACCGGGAGGTAGAAGGCGTCAAAGTGCCC ACCGGCCGTTCCTTCTATAACGCCGGCGAGCCGATTCAAACGACCGAGTACACCCAGGTGCAATTCGGCCAGGCGGTGAG CGACGCCCAGGTGGCGATCCCGGCAAATTTCAATAAGGCCCCCGCCCCGACCCCCGACGGTGAGAAGCTGACCCAACTGG GCGATGGCGTGTATCTTCTCGAAAACGCGGCCCTCAACTACAACACCCTGTTCGTCGCTTTCGAGGAGTACGTTCTGGTG GTGGACGCCCCCGAGCCGCTGCCCTACTCGGCCCACACCAGCAGGGTCATCGAGCGGATCAAAAAGACCGTTCCGGGCAA ACCAATCCAATATCTGGTGCTTACCCACCACCACGCCGATCATACCGGGGGCGTGCGGACCTATATTGCCGAGGGCACCA CGGTCGTCACCACTCCGGGTAACCGGGGGGCGATCGAAAAGCTGATGGCCGGCCGCTACACCATTGCACCGGATGAGTTT GCCAGGAAGCCCCAACCGCTCAAACTCGAAACGATCGAAGGCAAAAAGCGGGTATTCCGAGACGGCAAGCGCATCGTCGA ATTCTACGACATCGGTCCCAACCCCCATGCCCAGGAGATGGTCGTAGCCTGGCTACCCAAAGAAAAAATTCTCTTTCAGG CCGATCTCATCAACGTCAATGCGGGGGGCACCGTTCCCCCCGCCCAGGAGGCGACCATCAGCCTTGCCCAGAGGCTGGCA CAGTTGGGGATCACCCCAGAGCGCATCGCCTGTGTGCATGGGCGGACGATCACCGCCCAGGAACTGCGCGCTTCCCTTGT CCAGGCGCGTGACGACGGTTGA
Upstream 100 bases:
>100_bases GTCCCGCAAGCTTGAACGCACCTTTGCTTGCACAATCTGCACGAACGCCCCGGCGGCGTACCTTACAGTGGGCTTGTTCT GGTAATCGGGTATCGACAGG
Downstream 100 bases:
>100_bases AGGCCGCCCCTTGCGCGTTATCGAGCGCATAAGCTTGCAGGCAGTCGGAGCGCAGGCTTAGAAAAGCCTGCGATTCCTGC GCGCTGCCTCTCCATCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MAAMGKRWVAFGLGLAGSLAAVAAVAQQVNSTASEQSLRRARAVLDAGIEALGGPQVLEKSRRITLKEVGHSLNAYQSAN PEPPYSKTAYEEVTVIDYKDGRLFNEQKSAFPGIVVWNRTIIDGQNGYNLDMRAKTAVAIADPSIAANRAIVRKLPHLLL REARNRVDTLRWVGEDDFGGKKQQVITYARDDGRQLALYFDAQTRLLTKSDFLYTDPAVGDSRSEFVYPGYREVEGVKVP TGRSFYNAGEPIQTTEYTQVQFGQAVSDAQVAIPANFNKAPAPTPDGEKLTQLGDGVYLLENAALNYNTLFVAFEEYVLV VDAPEPLPYSAHTSRVIERIKKTVPGKPIQYLVLTHHHADHTGGVRTYIAEGTTVVTTPGNRGAIEKLMAGRYTIAPDEF ARKPQPLKLETIEGKKRVFRDGKRIVEFYDIGPNPHAQEMVVAWLPKEKILFQADLINVNAGGTVPPAQEATISLAQRLA QLGITPERIACVHGRTITAQELRASLVQARDDG
Sequences:
>Translated_513_residues MAAMGKRWVAFGLGLAGSLAAVAAVAQQVNSTASEQSLRRARAVLDAGIEALGGPQVLEKSRRITLKEVGHSLNAYQSAN PEPPYSKTAYEEVTVIDYKDGRLFNEQKSAFPGIVVWNRTIIDGQNGYNLDMRAKTAVAIADPSIAANRAIVRKLPHLLL REARNRVDTLRWVGEDDFGGKKQQVITYARDDGRQLALYFDAQTRLLTKSDFLYTDPAVGDSRSEFVYPGYREVEGVKVP TGRSFYNAGEPIQTTEYTQVQFGQAVSDAQVAIPANFNKAPAPTPDGEKLTQLGDGVYLLENAALNYNTLFVAFEEYVLV VDAPEPLPYSAHTSRVIERIKKTVPGKPIQYLVLTHHHADHTGGVRTYIAEGTTVVTTPGNRGAIEKLMAGRYTIAPDEF ARKPQPLKLETIEGKKRVFRDGKRIVEFYDIGPNPHAQEMVVAWLPKEKILFQADLINVNAGGTVPPAQEATISLAQRLA QLGITPERIACVHGRTITAQELRASLVQARDDG >Mature_512_residues AAMGKRWVAFGLGLAGSLAAVAAVAQQVNSTASEQSLRRARAVLDAGIEALGGPQVLEKSRRITLKEVGHSLNAYQSANP EPPYSKTAYEEVTVIDYKDGRLFNEQKSAFPGIVVWNRTIIDGQNGYNLDMRAKTAVAIADPSIAANRAIVRKLPHLLLR EARNRVDTLRWVGEDDFGGKKQQVITYARDDGRQLALYFDAQTRLLTKSDFLYTDPAVGDSRSEFVYPGYREVEGVKVPT GRSFYNAGEPIQTTEYTQVQFGQAVSDAQVAIPANFNKAPAPTPDGEKLTQLGDGVYLLENAALNYNTLFVAFEEYVLVV DAPEPLPYSAHTSRVIERIKKTVPGKPIQYLVLTHHHADHTGGVRTYIAEGTTVVTTPGNRGAIEKLMAGRYTIAPDEFA RKPQPLKLETIEGKKRVFRDGKRIVEFYDIGPNPHAQEMVVAWLPKEKILFQADLINVNAGGTVPPAQEATISLAQRLAQ LGITPERIACVHGRTITAQELRASLVQARDDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56293; Mature: 56161
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMGKRWVAFGLGLAGSLAAVAAVAQQVNSTASEQSLRRARAVLDAGIEALGGPQVLEK CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SRRITLKEVGHSLNAYQSANPEPPYSKTAYEEVTVIDYKDGRLFNEQKSAFPGIVVWNRT HCCEEHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEECCHHHCCCCEEEEEEE IIDGQNGYNLDMRAKTAVAIADPSIAANRAIVRKLPHLLLREARNRVDTLRWVGEDDFGG EEECCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KKQQVITYARDDGRQLALYFDAQTRLLTKSDFLYTDPAVGDSRSEFVYPGYREVEGVKVP CCEEEEEEEECCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCEECCCCCCCCCEECC TGRSFYNAGEPIQTTEYTQVQFGQAVSDAQVAIPANFNKAPAPTPDGEKLTQLGDGVYLL CCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCEEEE ENAALNYNTLFVAFEEYVLVVDAPEPLPYSAHTSRVIERIKKTVPGKPIQYLVLTHHHAD ECCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCC HTGGVRTYIAEGTTVVTTPGNRGAIEKLMAGRYTIAPDEFARKPQPLKLETIEGKKRVFR CCCCEEEEEECCCEEEECCCCCHHHHHHHCCCEEECCHHHHCCCCCEEEEECCCHHHHHH DGKRIVEFYDIGPNPHAQEMVVAWLPKEKILFQADLINVNAGGTVPPAQEATISLAQRLA CCCEEEEEEECCCCCCHHCEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHH QLGITPERIACVHGRTITAQELRASLVQARDDG HHCCCHHHEEEECCCEECHHHHHHHHHHHCCCC >Mature Secondary Structure AAMGKRWVAFGLGLAGSLAAVAAVAQQVNSTASEQSLRRARAVLDAGIEALGGPQVLEK CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH SRRITLKEVGHSLNAYQSANPEPPYSKTAYEEVTVIDYKDGRLFNEQKSAFPGIVVWNRT HCCEEHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEECCHHHCCCCEEEEEEE IIDGQNGYNLDMRAKTAVAIADPSIAANRAIVRKLPHLLLREARNRVDTLRWVGEDDFGG EEECCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC KKQQVITYARDDGRQLALYFDAQTRLLTKSDFLYTDPAVGDSRSEFVYPGYREVEGVKVP CCEEEEEEEECCCCEEEEEEECCEEEEECCCCEEECCCCCCCCCCEECCCCCCCCCEECC TGRSFYNAGEPIQTTEYTQVQFGQAVSDAQVAIPANFNKAPAPTPDGEKLTQLGDGVYLL CCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCEEEE ENAALNYNTLFVAFEEYVLVVDAPEPLPYSAHTSRVIERIKKTVPGKPIQYLVLTHHHAD ECCCCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCC HTGGVRTYIAEGTTVVTTPGNRGAIEKLMAGRYTIAPDEFARKPQPLKLETIEGKKRVFR CCCCEEEEEECCCEEEECCCCCHHHHHHHCCCEEECCHHHHCCCCCEEEEECCCHHHHHH DGKRIVEFYDIGPNPHAQEMVVAWLPKEKILFQADLINVNAGGTVPPAQEATISLAQRLA CCCEEEEEEECCCCCCHHCEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHH QLGITPERIACVHGRTITAQELRASLVQARDDG HHCCCHHHEEEECCCEECHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA