Click here to switch to the map view.

The map label for this gene is yidS [C]

Identifier: 37521281

GI number: 37521281

Start: 1820938

End: 1822083

Strand: Reverse

Name: yidS [C]

Synonym: gll1712

Alternate gene names: 37521281

Gene position: 1822083-1820938 (Counterclockwise)

Preceding gene: 37521285

Following gene: 37521278

Centisome position: 39.11

GC content: 65.01

Gene sequence:

>1146_bases
ATGGCGGAAATATTCGACTGCGCGGTGATTGGGGCGGGACCGGGGGGCGGAGCGGCAGCTTACCATCTGGCCCGGTGCGG
CCACAGCGTGCTGGTGCTCGAAAAGCAATCTTTGCCGCGCTACAAGCCCTGCGGCGGCGGCGTCTCCCCGGCGGTGGCCG
CCTGGTTCGACTTTGATTTTTCTCCCGCCATCTGCGCCTACGTCGACACCATCCGCTACACCTGGCAGATGGGTGAGCGG
GTCGAGGCGCCTTTGGGCCTGCAGACACCCATCTGGATGGTCCGCCGCGACGTGTTCGACCATTTTTTGATCTCCCAGGC
CGTGGCGCGCGGGGCCGAGTTGCACGCGCCCTGCCCGGTCGGTGCGATTACCCGCAGCGGGGATCGCTGGCGGCTCGACA
CCGATGCGGGACCGTTTTACAGCCGCTACCTCATCGGTGCAGACGGCGCCAAAGGTCCCACCGCCCGCTGGTTGGGCCTC
GAAAAGCGGGCCGTGGCCATTGGCGGGGCGATCGAAGTCGAAATTTCCGCACCGGTACCGGAGCCGAACTTTGCCCACTT
CGAATTCGGGATGGTCAAGGACGGCTATCTCTGGAACTTCCCCAAAAACGGCGCCCACTCGATCGGTATCGGCAGCTTCG
GGCGGCGCAAAGTCGATCTCAAAACCCCTTTGGCCCAGTACGTCGCCCACTTTGGACTTTCGCTGGACGGAATCACCCTG
CACGGCCACCCGCTCTTGCTCTGGAAAGGCCCGTCGTTGCTGCACACCGAGGGCGCGCTTCTGTGCGGCGAGGCGGCCGG
GATCGTCGACCCGTTCACCGCCGAGGGGATCCGCCCTGCGCTGTACACCGGTGTGCAGGCCGCTCACGCTGTCGCCGAGG
CTCTAGCAGGAGACACCCATGCGCTCGCCCGCTACAGCGAGCACATCAAAAGCGAGTGGGGAGAGGATTTGCGCTGGGCC
GACCGCCTCGCCCAGGTGTTCTACGCTTTTCCGCGCATCGCCTACAAAGTCGGCGTTCACCGCCCCTCCGCCACCCGCAC
GATGGGCAGACTGCTTTCGGGCTCTCTGAGTTACCGAGAAGCTGCAGGGCGAGCGATACAACGGCTCGTTGGCTACAACC
ACGCGCAAAGTGGCGGCAGACAATAG

Upstream 100 bases:

>100_bases
CATTGTGTCAACTGGTCGTAATAATCTGCCAAGATCTGGCCGAATCGCCGCAATCTTTGTGGCACGATAAGCTTCCGGAG
GCTCGCAAGGCGGCAAAGCG

Downstream 100 bases:

>100_bases
AGGCTATTTCTCGCGGGCAGAGAGGACAATCGTTTGTTGCGTAGCGTATCGGAAAGGCTGCCGTACAAGATCTTTTCGTT
TGAGCTCACTACACCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MAEIFDCAVIGAGPGGGAAAYHLARCGHSVLVLEKQSLPRYKPCGGGVSPAVAAWFDFDFSPAICAYVDTIRYTWQMGER
VEAPLGLQTPIWMVRRDVFDHFLISQAVARGAELHAPCPVGAITRSGDRWRLDTDAGPFYSRYLIGADGAKGPTARWLGL
EKRAVAIGGAIEVEISAPVPEPNFAHFEFGMVKDGYLWNFPKNGAHSIGIGSFGRRKVDLKTPLAQYVAHFGLSLDGITL
HGHPLLLWKGPSLLHTEGALLCGEAAGIVDPFTAEGIRPALYTGVQAAHAVAEALAGDTHALARYSEHIKSEWGEDLRWA
DRLAQVFYAFPRIAYKVGVHRPSATRTMGRLLSGSLSYREAAGRAIQRLVGYNHAQSGGRQ

Sequences:

>Translated_381_residues
MAEIFDCAVIGAGPGGGAAAYHLARCGHSVLVLEKQSLPRYKPCGGGVSPAVAAWFDFDFSPAICAYVDTIRYTWQMGER
VEAPLGLQTPIWMVRRDVFDHFLISQAVARGAELHAPCPVGAITRSGDRWRLDTDAGPFYSRYLIGADGAKGPTARWLGL
EKRAVAIGGAIEVEISAPVPEPNFAHFEFGMVKDGYLWNFPKNGAHSIGIGSFGRRKVDLKTPLAQYVAHFGLSLDGITL
HGHPLLLWKGPSLLHTEGALLCGEAAGIVDPFTAEGIRPALYTGVQAAHAVAEALAGDTHALARYSEHIKSEWGEDLRWA
DRLAQVFYAFPRIAYKVGVHRPSATRTMGRLLSGSLSYREAAGRAIQRLVGYNHAQSGGRQ
>Mature_380_residues
AEIFDCAVIGAGPGGGAAAYHLARCGHSVLVLEKQSLPRYKPCGGGVSPAVAAWFDFDFSPAICAYVDTIRYTWQMGERV
EAPLGLQTPIWMVRRDVFDHFLISQAVARGAELHAPCPVGAITRSGDRWRLDTDAGPFYSRYLIGADGAKGPTARWLGLE
KRAVAIGGAIEVEISAPVPEPNFAHFEFGMVKDGYLWNFPKNGAHSIGIGSFGRRKVDLKTPLAQYVAHFGLSLDGITLH
GHPLLLWKGPSLLHTEGALLCGEAAGIVDPFTAEGIRPALYTGVQAAHAVAEALAGDTHALARYSEHIKSEWGEDLRWAD
RLAQVFYAFPRIAYKVGVHRPSATRTMGRLLSGSLSYREAAGRAIQRLVGYNHAQSGGRQ

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 41157; Mature: 41026

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIFDCAVIGAGPGGGAAAYHLARCGHSVLVLEKQSLPRYKPCGGGVSPAVAAWFDFDF
CCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
SPAICAYVDTIRYTWQMGERVEAPLGLQTPIWMVRRDVFDHFLISQAVARGAELHAPCPV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAITRSGDRWRLDTDAGPFYSRYLIGADGAKGPTARWLGLEKRAVAIGGAIEVEISAPVP
CCEECCCCCEEEECCCCCCHHEEEEECCCCCCCCHHHCCCCCCEEEECCEEEEEEECCCC
EPNFAHFEFGMVKDGYLWNFPKNGAHSIGIGSFGRRKVDLKTPLAQYVAHFGLSLDGITL
CCCCCEEEECEEECCEEECCCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHCCCCCCEEE
HGHPLLLWKGPSLLHTEGALLCGEAAGIVDPFTAEGIRPALYTGVQAAHAVAEALAGDTH
CCCEEEEECCCCEEECCCCEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
ALARYSEHIKSEWGEDLRWADRLAQVFYAFPRIAYKVGVHRPSATRTMGRLLSGSLSYRE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
AAGRAIQRLVGYNHAQSGGRQ
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AEIFDCAVIGAGPGGGAAAYHLARCGHSVLVLEKQSLPRYKPCGGGVSPAVAAWFDFDF
CCEEEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCC
SPAICAYVDTIRYTWQMGERVEAPLGLQTPIWMVRRDVFDHFLISQAVARGAELHAPCPV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GAITRSGDRWRLDTDAGPFYSRYLIGADGAKGPTARWLGLEKRAVAIGGAIEVEISAPVP
CCEECCCCCEEEECCCCCCHHEEEEECCCCCCCCHHHCCCCCCEEEECCEEEEEEECCCC
EPNFAHFEFGMVKDGYLWNFPKNGAHSIGIGSFGRRKVDLKTPLAQYVAHFGLSLDGITL
CCCCCEEEECEEECCEEECCCCCCCCCCCCCCCCCEEEEHHCHHHHHHHHHCCCCCCEEE
HGHPLLLWKGPSLLHTEGALLCGEAAGIVDPFTAEGIRPALYTGVQAAHAVAEALAGDTH
CCCEEEEECCCCEEECCCCEEECCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
ALARYSEHIKSEWGEDLRWADRLAQVFYAFPRIAYKVGVHRPSATRTMGRLLSGSLSYRE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHH
AAGRAIQRLVGYNHAQSGGRQ
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]