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The map label for this gene is accD

Identifier: 37521174

GI number: 37521174

Start: 1721094

End: 1722008

Strand: Direct

Name: accD

Synonym: gvip227

Alternate gene names: 37521174

Gene position: 1721094-1722008 (Clockwise)

Preceding gene: 37521173

Following gene: 37521175

Centisome position: 36.94

GC content: 63.61

Gene sequence:

>915_bases
ATGGATCTGATCGAATGGTTTAAGGACCGGCGCAAGAATGGCCGGCTCAGCAAAGAAGAGCGCCAGCGCGAGATCGCCGA
CGGTCTTTGGACCAAGTGCGTTTCGTGCGCTGCGCTGCACTACACCAAAGATTTTCAGCTCAATTTGTGCGTCTGCCCGG
CCTGCGGTCACCATGAGCGGGTGGGTGCTCCCGAGCGTATCCCCCAACTGGTGGACCCCGACAGTTGGGTTTCCACCGAT
GATCATCTGCTCGCCAACGATCCGCTTGGCTTCAACGACATCAAGAGCTACCCCGAGCGCCTCGCCCAGGCGCGCGAGAA
GACTGGGCTTTCCGACGCCATCGTCACGGGGCTTGCCACCCTCGAAGGTCGGCCGATCGCCCTTGGAGTGATGGATTTTC
GGTTCATGGGCGGCAGCATGGGCTCGGTGGTGGGTGAGCGGATCACCCGGCTGGTCGAGCGGGCCACCGCCGAGCGGCGG
GCGGCGATTCTGGTGTGCGCCTCGGGTGGGGCGCGCATGCAGGAAGGCGTGCTCTCGCTGGTACAGATGGCCCGCACCAG
TGCGGCACTGCAGAACCACCGCTCCGACCGGCAGCTGTTCGTCTCAGTGCTCACCAACCCAACTACCGGCGGCGTGACGG
CAAGTTTTGCGATGCTGGGCGACATTATCCTGGCGGAGCCCAAGGCCACGATCGGTTTTGCCGGTCGCCGCGTTATCGAG
CAGACTCTGCGCCAGAAATTGCCCGAAGGGTTTCAGACTGCGGAGTTTTTGCTCAAACACGGATTTGTCGATCGCATCGT
CGAGCGCGCCCAGTTGCGCCCGACGCTTGCCAGGATTCTGCGCCTGCACGGGGTGGGGCAGGTGCAGGCCTACCGCCCGT
CGCCCCAGGCTTCGCTTGCCCAGGAGCAACAGTAG

Upstream 100 bases:

>100_bases
ATCTGTAAAACCACCGTTGACAAACCGGACGCCATTGCAAAAGTAGGTATAATGACGCGGTACGGCTTTCACACTGGCGC
CCGGTTTTGGAGAGCACTCT

Downstream 100 bases:

>100_bases
TCACAGGCGGGATATAGCTCCCAGAGCGCAAGGCGGCTATCGTTGAGGTTGGCCACGGTTGATGCAGCGATGACAGGCAC
GCAACTGCGGGATTTTCTGC

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDLIEWFKDRRKNGRLSKEERQREIADGLWTKCVSCAALHYTKDFQLNLCVCPACGHHERVGAPERIPQLVDPDSWVSTD
DHLLANDPLGFNDIKSYPERLAQAREKTGLSDAIVTGLATLEGRPIALGVMDFRFMGGSMGSVVGERITRLVERATAERR
AAILVCASGGARMQEGVLSLVQMARTSAALQNHRSDRQLFVSVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIE
QTLRQKLPEGFQTAEFLLKHGFVDRIVERAQLRPTLARILRLHGVGQVQAYRPSPQASLAQEQQ

Sequences:

>Translated_304_residues
MDLIEWFKDRRKNGRLSKEERQREIADGLWTKCVSCAALHYTKDFQLNLCVCPACGHHERVGAPERIPQLVDPDSWVSTD
DHLLANDPLGFNDIKSYPERLAQAREKTGLSDAIVTGLATLEGRPIALGVMDFRFMGGSMGSVVGERITRLVERATAERR
AAILVCASGGARMQEGVLSLVQMARTSAALQNHRSDRQLFVSVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIE
QTLRQKLPEGFQTAEFLLKHGFVDRIVERAQLRPTLARILRLHGVGQVQAYRPSPQASLAQEQQ
>Mature_304_residues
MDLIEWFKDRRKNGRLSKEERQREIADGLWTKCVSCAALHYTKDFQLNLCVCPACGHHERVGAPERIPQLVDPDSWVSTD
DHLLANDPLGFNDIKSYPERLAQAREKTGLSDAIVTGLATLEGRPIALGVMDFRFMGGSMGSVVGERITRLVERATAERR
AAILVCASGGARMQEGVLSLVQMARTSAALQNHRSDRQLFVSVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIE
QTLRQKLPEGFQTAEFLLKHGFVDRIVERAQLRPTLARILRLHGVGQVQAYRPSPQASLAQEQQ

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=260, Percent_Identity=51.9230769230769, Blast_Score=261, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_GLOVI (Q7NK73)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924551.1
- ProteinModelPortal:   Q7NK73
- SMR:   Q7NK73
- GeneID:   2598571
- GenomeReviews:   BA000045_GR
- NMPDR:   fig|251221.1.peg.1605
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- ProtClustDB:   PRK05654
- BioCyc:   GVIO251221:GLR1605-MONOMER
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 33569; Mature: 33569

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIEWFKDRRKNGRLSKEERQREIADGLWTKCVSCAALHYTKDFQLNLCVCPACGHHER
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
VGAPERIPQLVDPDSWVSTDDHLLANDPLGFNDIKSYPERLAQAREKTGLSDAIVTGLAT
CCCHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEGRPIALGVMDFRFMGGSMGSVVGERITRLVERATAERRAAILVCASGGARMQEGVLSL
CCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHH
VQMARTSAALQNHRSDRQLFVSVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIE
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTLRQKLPEGFQTAEFLLKHGFVDRIVERAQLRPTLARILRLHGVGQVQAYRPSPQASLA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHH
QEQQ
CCCC
>Mature Secondary Structure
MDLIEWFKDRRKNGRLSKEERQREIADGLWTKCVSCAALHYTKDFQLNLCVCPACGHHER
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC
VGAPERIPQLVDPDSWVSTDDHLLANDPLGFNDIKSYPERLAQAREKTGLSDAIVTGLAT
CCCHHHCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LEGRPIALGVMDFRFMGGSMGSVVGERITRLVERATAERRAAILVCASGGARMQEGVLSL
CCCCCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHH
VQMARTSAALQNHRSDRQLFVSVLTNPTTGGVTASFAMLGDIILAEPKATIGFAGRRVIE
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QTLRQKLPEGFQTAEFLLKHGFVDRIVERAQLRPTLARILRLHGVGQVQAYRPSPQASLA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECCCCCHHHH
QEQQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292