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The map label for this gene is ppiA [C]

Identifier: 37521069

GI number: 37521069

Start: 1611961

End: 1612812

Strand: Direct

Name: ppiA [C]

Synonym: glr1500

Alternate gene names: 37521069

Gene position: 1611961-1612812 (Clockwise)

Preceding gene: 37521061

Following gene: 37521071

Centisome position: 34.6

GC content: 60.56

Gene sequence:

>852_bases
GTGGTCAGCACCGCCACCAGAGTCCTCGCACCGTGCACTCGACTGTCCATACGCTCCACCCGAAAAGCCCACGATCGAAA
GTATAATTGGGCACCGTGCGTTCCGATTCAGTCTCTGGCGAGAACCGAAGTGAGATTGTTGAAGTTGTGTTTGGGCTTTA
CCCTGCTTGCCGCCCTGGGCGGCTGCACCGGCGCCCCCCCAAAATCCGACCGGGCCGGAGCCGAACCGGTTGCCGTTCCT
GCCGAATACGCCAATTTTCCCCGGTTGACGGGTAAAGCCCTGGTCGAATTGACCACCACCCAGGGGCCGATCACCATCGT
CCTCGACGGCGACCGCGCCCCGATCAACGCCGGCAACTTTATCGATCTGGTGCAAAAGGGCGTCTACACGGGCACGGCCT
TCAATCGCTTCGAAAAGGGTTACCTGGTGCAGGTGAGCGATCCCCAGGGCAAAAACGACGGCGGCTACCTCGATCCGGCC
ACCGGCAAGATCCGGCGGGTGCCCATCGAGATCATTCCTGAGGGTGCCTCCCAGCCGGTTTACGGCAAGACCCTCCGCCA
GGCGGGGATCCCCGAGAAGATTTTCCCGGTGATGCGCCACTTGCCCGGAGCGGTCGGTCTGGCGCACACCGAAAAAGACC
CCAACTCCGGTTCGACCCAGTTTTATATCACCTACGCCAACAACGAAATGGTCAACCCGCGCGGCAACTTCCTGGATGGG
CGCTACACGGTCTTCGGTTACGTGGTGGATGGTCTGACCAACGCCGAGAAACTGCGCATCGGCGATAAGATCCTCTCTGC
AAAGGTGGTTCTGGGGACCGAAAAGTTCCAGCCCTCCGCTGCCGGTAAATAA

Upstream 100 bases:

>100_bases
GGTAAAGCTGTCGATGGCGGGGGCGCTCTGGGCGATGGTTATCCCTGCCGGCGGCAGAGGTGCAGCCACCGTACCCAAAA
CGGTCCCCGTCCACGCCAGG

Downstream 100 bases:

>100_bases
TCCTCAGCGGCTGAGCGCCCGGTCGATGAGCACCTGCTGGGAGCTGATTTCGATTTCACCGGGCAACGCCTGACGGCGGG
CGTAGGCGCCGTTGGTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Putative thylakoid lumen PPIase; Putative thylakoid lumen rotamase [H]

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MVSTATRVLAPCTRLSIRSTRKAHDRKYNWAPCVPIQSLARTEVRLLKLCLGFTLLAALGGCTGAPPKSDRAGAEPVAVP
AEYANFPRLTGKALVELTTTQGPITIVLDGDRAPINAGNFIDLVQKGVYTGTAFNRFEKGYLVQVSDPQGKNDGGYLDPA
TGKIRRVPIEIIPEGASQPVYGKTLRQAGIPEKIFPVMRHLPGAVGLAHTEKDPNSGSTQFYITYANNEMVNPRGNFLDG
RYTVFGYVVDGLTNAEKLRIGDKILSAKVVLGTEKFQPSAAGK

Sequences:

>Translated_283_residues
MVSTATRVLAPCTRLSIRSTRKAHDRKYNWAPCVPIQSLARTEVRLLKLCLGFTLLAALGGCTGAPPKSDRAGAEPVAVP
AEYANFPRLTGKALVELTTTQGPITIVLDGDRAPINAGNFIDLVQKGVYTGTAFNRFEKGYLVQVSDPQGKNDGGYLDPA
TGKIRRVPIEIIPEGASQPVYGKTLRQAGIPEKIFPVMRHLPGAVGLAHTEKDPNSGSTQFYITYANNEMVNPRGNFLDG
RYTVFGYVVDGLTNAEKLRIGDKILSAKVVLGTEKFQPSAAGK
>Mature_283_residues
MVSTATRVLAPCTRLSIRSTRKAHDRKYNWAPCVPIQSLARTEVRLLKLCLGFTLLAALGGCTGAPPKSDRAGAEPVAVP
AEYANFPRLTGKALVELTTTQGPITIVLDGDRAPINAGNFIDLVQKGVYTGTAFNRFEKGYLVQVSDPQGKNDGGYLDPA
TGKIRRVPIEIIPEGASQPVYGKTLRQAGIPEKIFPVMRHLPGAVGLAHTEKDPNSGSTQFYITYANNEMVNPRGNFLDG
RYTVFGYVVDGLTNAEKLRIGDKILSAKVVLGTEKFQPSAAGK

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Required for the assembly and stabilization of PSII [H]

COG id: COG0652

COG function: function code O; Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Gene ontology:

Cell location: Cellular thylakoid lumen (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789763, Length=168, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786736, Length=167, Percent_Identity=27.5449101796407, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI19922376, Length=185, Percent_Identity=25.9459459459459, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR002130
- InterPro:   IPR023222 [H]

Pfam domain/function: PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 30471; Mature: 30471

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50072 CSA_PPIASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTATRVLAPCTRLSIRSTRKAHDRKYNWAPCVPIQSLARTEVRLLKLCLGFTLLAALG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GCTGAPPKSDRAGAEPVAVPAEYANFPRLTGKALVELTTTQGPITIVLDGDRAPINAGNF
CCCCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH
IDLVQKGVYTGTAFNRFEKGYLVQVSDPQGKNDGGYLDPATGKIRRVPIEIIPEGASQPV
HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCEEECCEEEECCCCCCCH
YGKTLRQAGIPEKIFPVMRHLPGAVGLAHTEKDPNSGSTQFYITYANNEMVNPRGNFLDG
HHHHHHHCCCCHHHHHHHHHCCCHHEEEECCCCCCCCCEEEEEEECCCEEECCCCCCCCC
RYTVFGYVVDGLTNAEKLRIGDKILSAKVVLGTEKFQPSAAGK
CEEEEEEEECCCCCHHHHHHCHHHHEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MVSTATRVLAPCTRLSIRSTRKAHDRKYNWAPCVPIQSLARTEVRLLKLCLGFTLLAALG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GCTGAPPKSDRAGAEPVAVPAEYANFPRLTGKALVELTTTQGPITIVLDGDRAPINAGNF
CCCCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCH
IDLVQKGVYTGTAFNRFEKGYLVQVSDPQGKNDGGYLDPATGKIRRVPIEIIPEGASQPV
HHHHHHCCCCCHHHHHCCCCEEEEECCCCCCCCCCEECCCCCCEEECCEEEECCCCCCCH
YGKTLRQAGIPEKIFPVMRHLPGAVGLAHTEKDPNSGSTQFYITYANNEMVNPRGNFLDG
HHHHHHHCCCCHHHHHHHHHCCCHHEEEECCCCCCCCCEEEEEEECCCEEECCCCCCCCC
RYTVFGYVVDGLTNAEKLRIGDKILSAKVVLGTEKFQPSAAGK
CEEEEEEEECCCCCHHHHHHCHHHHEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]