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The map label for this gene is 37520413

Identifier: 37520413

GI number: 37520413

Start: 897101

End: 897508

Strand: Reverse

Name: 37520413

Synonym: gll0844

Alternate gene names: NA

Gene position: 897508-897101 (Counterclockwise)

Preceding gene: 37520414

Following gene: 37520411

Centisome position: 19.26

GC content: 58.33

Gene sequence:

>408_bases
GTGACATTTGTGTATTTACTCGACACCTGCACTGTTAGCGACTTTGCAAAAGCGCAGCCCGGCGTGATCGCCCGGATCAA
GTCCACGGCGCCGACGCTGGTTTCCATTTCCAGCATCACGGTGATGGAAATCGAATGCGGGCTTCAGTTCAATCCGAAAC
GGGCTGAGAAGGTGGCTCCTGTGTTGGCCGCATTTGTGGACAGCGTTCAGATACTGCCCTTGAGTCTTGAGGACGCTCGT
GCGGCCGGCGCAATCCGCGCCGGCCTGACAAAACAAGGCAGACCCATTGGGGCATACGATGTGCTCCTGGCTGGTTGCGC
GGTATGCCGCGGTCTGATTTTCGTCACCTCGAACACCACTGAATTCGAGCGGGTCGGCGGCCTTCGTCTGGAGAACTGGC
GCTCGTAG

Upstream 100 bases:

>100_bases
GTTGGCCGGACATAGTCATGGAATTTAAGGGTGTCGAAGATCTGCCGACGTTCGAGAGCTATCGAGACGAGCTTTTGCCA
CCGAGACAGGATCCGCTGGC

Downstream 100 bases:

>100_bases
GGGGGTAGCCCTAAGGCAAGCGCAACAATGGACGGCTCCAGGGAATGGCCGTCAAGATCAGCAAGGCCGCAGAGGTGTAG
CACACCACCGACCACAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTFVYLLDTCTVSDFAKAQPGVIARIKSTAPTLVSISSITVMEIECGLQFNPKRAEKVAPVLAAFVDSVQILPLSLEDAR
AAGAIRAGLTKQGRPIGAYDVLLAGCAVCRGLIFVTSNTTEFERVGGLRLENWRS

Sequences:

>Translated_135_residues
MTFVYLLDTCTVSDFAKAQPGVIARIKSTAPTLVSISSITVMEIECGLQFNPKRAEKVAPVLAAFVDSVQILPLSLEDAR
AAGAIRAGLTKQGRPIGAYDVLLAGCAVCRGLIFVTSNTTEFERVGGLRLENWRS
>Mature_134_residues
TFVYLLDTCTVSDFAKAQPGVIARIKSTAPTLVSISSITVMEIECGLQFNPKRAEKVAPVLAAFVDSVQILPLSLEDARA
AGAIRAGLTKQGRPIGAYDVLLAGCAVCRGLIFVTSNTTEFERVGGLRLENWRS

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14446; Mature: 14315

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFVYLLDTCTVSDFAKAQPGVIARIKSTAPTLVSISSITVMEIECGLQFNPKRAEKVAP
CEEEEEEECCCCCHHHCCCCCEEEEECCCCCCEEEECCEEEEEEEECCEECCHHHHHHHH
VLAAFVDSVQILPLSLEDARAAGAIRAGLTKQGRPIGAYDVLLAGCAVCRGLIFVTSNTT
HHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCC
EFERVGGLRLENWRS
CHHHHCCEECCCCCC
>Mature Secondary Structure 
TFVYLLDTCTVSDFAKAQPGVIARIKSTAPTLVSISSITVMEIECGLQFNPKRAEKVAP
EEEEEEECCCCCHHHCCCCCEEEEECCCCCCEEEECCEEEEEEEECCEECCHHHHHHHH
VLAAFVDSVQILPLSLEDARAAGAIRAGLTKQGRPIGAYDVLLAGCAVCRGLIFVTSNTT
HHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCC
EFERVGGLRLENWRS
CHHHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]