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The map label for this gene is dedA [H]

Identifier: 37520179

GI number: 37520179

Start: 653917

End: 654552

Strand: Direct

Name: dedA [H]

Synonym: glr0610

Alternate gene names: 37520179

Gene position: 653917-654552 (Clockwise)

Preceding gene: 37520178

Following gene: 37520180

Centisome position: 14.04

GC content: 59.43

Gene sequence:

>636_bases
GTGGAGCCAGTCCTGGATTTTTTTCGTTACCTGGGCAACTTTGAGGAACTGATCCGCGCCGGGGGGTACGTGGCGCTGAC
GGCCATCATCTTCGTGGAGACGGGGCTGCTCATTGGGTTTTTTCTGCCGGGCGACTCGTTGCTCGTCGCTGCGGGTGTAT
TGATCGCCGCCACCGGTCTGCTCAACATCTGGGTGCTGGCGGCCCTTTTGTGCACAGCGGCCATCGTCGGCGACACCGTC
GGCTACTGGATTGGGGCAAAGGCGGGGCCGCGGTTGTTCTCGCGGGAGAAATCCCTGCTTTTTGCCAAGGACCACCTGAT
CAAAGCTGAGCGCTTCTATACCAAGTACGGCGCCAAGACCATTTTGCTGGCGCGCTGGGTGCCTATCGTGCGCACGTTTG
CGCCGGTGGTGGCCGGGGCGGCGAGGATGCACTATCCGACGTTTTTGCTCTTCAACGTCGTGGGCGGGGTCACCTGGATC
GGTTCGCTGCTGATTGGCAGTTACTTTTTGGGCCAGCTCATCCCAGATCTCGAAAAAAACGTCCACATCGTCGTAGCGGT
GGTAGTTTTGCTGTCGATTCTGCCGCCGATTATTGAGTATCTCAAAGCCCGCCGCGAGCCGGACGCTTCCCGATAA

Upstream 100 bases:

>100_bases
ATCAGAGTTCTGCACGGAAGTTACCAGTGTTGCAATAGGTGCAAATGCAGTAAAGACCGTACTGGTAGAGTAAGGATGAG
GTTTGCTGGAGAGACATTCC

Downstream 100 bases:

>100_bases
AAAAGTGCGGGCGGGGGCAACCACCACCCCGGCTGTCCCGGTTCCAACTGCCCCTGCGCGGGATCTGTAGCCGGTAGTAC
CATTGATCATTGAGCGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MEPVLDFFRYLGNFEELIRAGGYVALTAIIFVETGLLIGFFLPGDSLLVAAGVLIAATGLLNIWVLAALLCTAAIVGDTV
GYWIGAKAGPRLFSREKSLLFAKDHLIKAERFYTKYGAKTILLARWVPIVRTFAPVVAGAARMHYPTFLLFNVVGGVTWI
GSLLIGSYFLGQLIPDLEKNVHIVVAVVVLLSILPPIIEYLKARREPDASR

Sequences:

>Translated_211_residues
MEPVLDFFRYLGNFEELIRAGGYVALTAIIFVETGLLIGFFLPGDSLLVAAGVLIAATGLLNIWVLAALLCTAAIVGDTV
GYWIGAKAGPRLFSREKSLLFAKDHLIKAERFYTKYGAKTILLARWVPIVRTFAPVVAGAARMHYPTFLLFNVVGGVTWI
GSLLIGSYFLGQLIPDLEKNVHIVVAVVVLLSILPPIIEYLKARREPDASR
>Mature_211_residues
MEPVLDFFRYLGNFEELIRAGGYVALTAIIFVETGLLIGFFLPGDSLLVAAGVLIAATGLLNIWVLAALLCTAAIVGDTV
GYWIGAKAGPRLFSREKSLLFAKDHLIKAERFYTKYGAKTILLARWVPIVRTFAPVVAGAARMHYPTFLLFNVVGGVTWI
GSLLIGSYFLGQLIPDLEKNVHIVVAVVVLLSILPPIIEYLKARREPDASR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=42.6470588235294, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=37.012987012987, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789384, Length=175, Percent_Identity=31.4285714285714, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23061; Mature: 23061

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPVLDFFRYLGNFEELIRAGGYVALTAIIFVETGLLIGFFLPGDSLLVAAGVLIAATGL
CCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
LNIWVLAALLCTAAIVGDTVGYWIGAKAGPRLFSREKSLLFAKDHLIKAERFYTKYGAKT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ILLARWVPIVRTFAPVVAGAARMHYPTFLLFNVVGGVTWIGSLLIGSYFLGQLIPDLEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VHIVVAVVVLLSILPPIIEYLKARREPDASR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEPVLDFFRYLGNFEELIRAGGYVALTAIIFVETGLLIGFFLPGDSLLVAAGVLIAATGL
CCHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
LNIWVLAALLCTAAIVGDTVGYWIGAKAGPRLFSREKSLLFAKDHLIKAERFYTKYGAKT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ILLARWVPIVRTFAPVVAGAARMHYPTFLLFNVVGGVTWIGSLLIGSYFLGQLIPDLEKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VHIVVAVVVLLSILPPIIEYLKARREPDASR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]