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The map label for this gene is yfmR [H]

Identifier: 37520166

GI number: 37520166

Start: 640326

End: 642245

Strand: Direct

Name: yfmR [H]

Synonym: glr0597

Alternate gene names: 37520166

Gene position: 640326-642245 (Clockwise)

Preceding gene: 37520162

Following gene: 37520167

Centisome position: 13.74

GC content: 61.82

Gene sequence:

>1920_bases
ATGAGCCTGATTTCGCTGCAATCGGTACACAAGAGCCTCGGCCTGAAGGTACTCCTGCAGGGTGCCACCTTCAGCCTGGA
GGCCGGGGACAAGGTGGGGCTGATCGGCACCAACGGCTCGGGCAAATCGACGCTGCTGAAGATTTTGGCCGGTCTCGAAG
CGGTCGACGCGGGCCAGATCCAAATGGGCCACGGGGCGCGGGTGGTCTATTTGCCCCAGCAGCCGGAACTAGACCCCGAG
CGCACAGTAATCGAGCAGGTATTCGCCGACAGCGGCGAGCGGATGGACCTGGTGCGCGAGTACGAGCAGTTGGTGGCCAA
ACTCGCCCACCACGCGGATGACCCGGTACTGAACACCCGCCTGGCCAGCCTCATGCAGCGGATGGAGACCGGTGGAGCCT
GGGAGTTGGAGACCCAGGCGAAGATCGTCCTCACCAAACTCGGCATCGTCGATTTTGAGGCCAAAGTCGGCACCCTCTCG
GGGGGCTACCGTCGGCGTATAGCCCTCGCCACCGCGCTACTTGCCGAGCCGGACGTGCTGTTGCTCGATGAACCCACCAA
CCACCTCGACGCGCTCTCGGTGGAGTGGCTGCAAAGCTACCTGGGCCGCTTCCGTGGTGCAGTGGTGCTGGTCACCCACG
ACCGCTACTTTCTCGACAAAGTCACCGGCCGCATTCTGGAATTGGATCGGGGTGAACTAACCGCCTACAGCGGCAACTAC
GCCTACTATCTGGAGAAAAAGGCGCTTGCCGAGGAGGCCGAAGCGAGCAGCCAGCGCAAACACCGCGGGGTATTGCGCCG
CGAACTCGAATGGCTCAAGCGCGGACCCAAGGCCCGCTCCACCAAGCAAAAAGCCCGCATCGAGCGCGCGCGCGCCCTGC
AGGATCAGCAATTTCGCCAGGCCAAGGGCAAAGTCGAAATCGCCACCCCCGGCCGCCGCATCGGCAGCAAAGTGATCGAA
CTGGAAAACGTCAGCAAAGCCCACAACGGCCGGACGCTCATCGACCGCTTCAGCTACAAATTCACCCCGGAGGATCGCCT
CGGCATCATCGGCGGCAACGGCGCCGGCAAATCGACCCTGACGGACATCATCACCGGCCGCCAGAGTGCGGACGCGGGCA
CCGTCGAGATCGGTTCCACCGTCCACATCGGCTACTTCGACCAGCACTCGGAAGCGTTGCTCGCCGCCATGGACAACAAC
CAGCGGGTGATCGACTACATCAAGGCGGCGGGCGAACTGGTCAAGCTGGAGGGCGGCGCGGTGATCACCGCCTCGCAGAT
GCTGGAGCGCTTTCTTTTTGCGCCCAACCAGCAGTACGTTCCGCTGGAGCAACTCTCAGGCGGTGAGAAGCGCCGGTTGT
TTCTGCTGCGCGAGTTGATGGCTGCCCCCAACGTGCTGATCCTCGACGAGCCGACCAACGATCTGGACGTGCCCACCCTG
GCGGTGCTCGAAGAGTACCTCGAAGATTTCAGCGGCTGTGTGATCGCCGTCTCCCACGACCGCTACTTTCTAGATCGGGT
GGTGGACACGATTTTTGCCTTTGAGGAGAACGGACAGATCCGCCAGTACCCCGGCAATTACAGCGTCTATTTGGAGCACA
AAAAAGCCGAAGAAGACGCCCAGGCGGCAATGGCAAAATTCGCCAAACCCTCTCCAGCGGCCAAACCCAAATCGACCGAA
ATGCCGTCCCTCGACCGGCCGCGCAAGCTTTCATCCAAAGAAAAGCGCGAGCTGCAGACCCTGGAAGCCAAAATCGCCCA
GATGGAAGATGAGCGCACCCAACTGGAACAGAGCCTGGGCAGCACCGATCCTGGCAATTTTACCCAGGCCAACGCCGTCT
ACGAGCGCATGGGTGAATTGACCCGGCATCTCGACGAAGCGACCGAGCGGTGGATGCACCTAGCCGAACTCGATTCCTGA

Upstream 100 bases:

>100_bases
CTCCAAAATCGGGTCCGACTTCCAGCCTAAGCACTCCTGCGCGCACCGACTGTGCTTACAGGAGTAGCTAGCATGGGGCG
GACACCCGCTGTTGACCCAT

Downstream 100 bases:

>100_bases
GCGCTTCTGCCACCTAAAATGGAAGTAGATTGAATAACCGGGCTTGTTGCTTTGAACATTGCCCTGCAGGAAGTGCTTTT
GCGCCTTGGTGCGGCCGTGC

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MSLISLQSVHKSLGLKVLLQGATFSLEAGDKVGLIGTNGSGKSTLLKILAGLEAVDAGQIQMGHGARVVYLPQQPELDPE
RTVIEQVFADSGERMDLVREYEQLVAKLAHHADDPVLNTRLASLMQRMETGGAWELETQAKIVLTKLGIVDFEAKVGTLS
GGYRRRIALATALLAEPDVLLLDEPTNHLDALSVEWLQSYLGRFRGAVVLVTHDRYFLDKVTGRILELDRGELTAYSGNY
AYYLEKKALAEEAEASSQRKHRGVLRRELEWLKRGPKARSTKQKARIERARALQDQQFRQAKGKVEIATPGRRIGSKVIE
LENVSKAHNGRTLIDRFSYKFTPEDRLGIIGGNGAGKSTLTDIITGRQSADAGTVEIGSTVHIGYFDQHSEALLAAMDNN
QRVIDYIKAAGELVKLEGGAVITASQMLERFLFAPNQQYVPLEQLSGGEKRRLFLLRELMAAPNVLILDEPTNDLDVPTL
AVLEEYLEDFSGCVIAVSHDRYFLDRVVDTIFAFEENGQIRQYPGNYSVYLEHKKAEEDAQAAMAKFAKPSPAAKPKSTE
MPSLDRPRKLSSKEKRELQTLEAKIAQMEDERTQLEQSLGSTDPGNFTQANAVYERMGELTRHLDEATERWMHLAELDS

Sequences:

>Translated_639_residues
MSLISLQSVHKSLGLKVLLQGATFSLEAGDKVGLIGTNGSGKSTLLKILAGLEAVDAGQIQMGHGARVVYLPQQPELDPE
RTVIEQVFADSGERMDLVREYEQLVAKLAHHADDPVLNTRLASLMQRMETGGAWELETQAKIVLTKLGIVDFEAKVGTLS
GGYRRRIALATALLAEPDVLLLDEPTNHLDALSVEWLQSYLGRFRGAVVLVTHDRYFLDKVTGRILELDRGELTAYSGNY
AYYLEKKALAEEAEASSQRKHRGVLRRELEWLKRGPKARSTKQKARIERARALQDQQFRQAKGKVEIATPGRRIGSKVIE
LENVSKAHNGRTLIDRFSYKFTPEDRLGIIGGNGAGKSTLTDIITGRQSADAGTVEIGSTVHIGYFDQHSEALLAAMDNN
QRVIDYIKAAGELVKLEGGAVITASQMLERFLFAPNQQYVPLEQLSGGEKRRLFLLRELMAAPNVLILDEPTNDLDVPTL
AVLEEYLEDFSGCVIAVSHDRYFLDRVVDTIFAFEENGQIRQYPGNYSVYLEHKKAEEDAQAAMAKFAKPSPAAKPKSTE
MPSLDRPRKLSSKEKRELQTLEAKIAQMEDERTQLEQSLGSTDPGNFTQANAVYERMGELTRHLDEATERWMHLAELDS
>Mature_638_residues
SLISLQSVHKSLGLKVLLQGATFSLEAGDKVGLIGTNGSGKSTLLKILAGLEAVDAGQIQMGHGARVVYLPQQPELDPER
TVIEQVFADSGERMDLVREYEQLVAKLAHHADDPVLNTRLASLMQRMETGGAWELETQAKIVLTKLGIVDFEAKVGTLSG
GYRRRIALATALLAEPDVLLLDEPTNHLDALSVEWLQSYLGRFRGAVVLVTHDRYFLDKVTGRILELDRGELTAYSGNYA
YYLEKKALAEEAEASSQRKHRGVLRRELEWLKRGPKARSTKQKARIERARALQDQQFRQAKGKVEIATPGRRIGSKVIEL
ENVSKAHNGRTLIDRFSYKFTPEDRLGIIGGNGAGKSTLTDIITGRQSADAGTVEIGSTVHIGYFDQHSEALLAAMDNNQ
RVIDYIKAAGELVKLEGGAVITASQMLERFLFAPNQQYVPLEQLSGGEKRRLFLLRELMAAPNVLILDEPTNDLDVPTLA
VLEEYLEDFSGCVIAVSHDRYFLDRVVDTIFAFEENGQIRQYPGNYSVYLEHKKAEEDAQAAMAKFAKPSPAAKPKSTEM
PSLDRPRKLSSKEKRELQTLEAKIAQMEDERTQLEQSLGSTDPGNFTQANAVYERMGELTRHLDEATERWMHLAELDS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=29.6577946768061, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=30.2411873840445, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=30.2411873840445, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI10947135, Length=552, Percent_Identity=28.804347826087, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI69354671, Length=552, Percent_Identity=28.804347826087, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI171184400, Length=227, Percent_Identity=31.2775330396476, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI2367384, Length=540, Percent_Identity=39.6296296296296, Blast_Score=380, Evalue=1e-106,
Organism=Escherichia coli, GI1787182, Length=647, Percent_Identity=34.6213292117465, Blast_Score=334, Evalue=8e-93,
Organism=Escherichia coli, GI1789751, Length=621, Percent_Identity=29.3075684380032, Blast_Score=254, Evalue=2e-68,
Organism=Escherichia coli, GI1787041, Length=539, Percent_Identity=30.2411873840445, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1790467, Length=241, Percent_Identity=30.2904564315353, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=28.1746031746032, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788225, Length=250, Percent_Identity=28, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789873, Length=243, Percent_Identity=30.4526748971193, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1789891, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786563, Length=219, Percent_Identity=30.1369863013699, Blast_Score=74, Evalue=4e-14,
Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=27.8761061946903, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=227, Percent_Identity=29.0748898678414, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=27.3972602739726, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=251, Percent_Identity=27.0916334661355, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=221, Percent_Identity=31.6742081447964, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789962, Length=216, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=233, Percent_Identity=27.8969957081545, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=27.8181818181818, Blast_Score=211, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=30.0952380952381, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17555318, Length=532, Percent_Identity=27.8195488721804, Blast_Score=180, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6320874, Length=550, Percent_Identity=30.9090909090909, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=560, Percent_Identity=28.9285714285714, Blast_Score=183, Evalue=9e-47,
Organism=Saccharomyces cerevisiae, GI6324314, Length=388, Percent_Identity=28.6082474226804, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=384, Percent_Identity=27.8645833333333, Blast_Score=123, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6325030, Length=388, Percent_Identity=28.0927835051546, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6320266, Length=378, Percent_Identity=24.0740740740741, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24666836, Length=536, Percent_Identity=30.410447761194, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24641342, Length=531, Percent_Identity=29.0018832391714, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=28.6238532110092, Blast_Score=197, Evalue=3e-50,
Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=28.6238532110092, Blast_Score=197, Evalue=3e-50,
Organism=Drosophila melanogaster, GI116007184, Length=219, Percent_Identity=28.7671232876712, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=28.7671232876712, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71058; Mature: 70927

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLISLQSVHKSLGLKVLLQGATFSLEAGDKVGLIGTNGSGKSTLLKILAGLEAVDAGQI
CCCCHHHHHHHHCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
QMGHGARVVYLPQQPELDPERTVIEQVFADSGERMDLVREYEQLVAKLAHHADDPVLNTR
EECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LASLMQRMETGGAWELETQAKIVLTKLGIVDFEAKVGTLSGGYRRRIALATALLAEPDVL
HHHHHHHHHCCCCEEECCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE
LLDEPTNHLDALSVEWLQSYLGRFRGAVVLVTHDRYFLDKVTGRILELDRGELTAYSGNY
EEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCEEEECCCE
AYYLEKKALAEEAEASSQRKHRGVLRRELEWLKRGPKARSTKQKARIERARALQDQQFRQ
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKGKVEIATPGRRIGSKVIELENVSKAHNGRTLIDRFSYKFTPEDRLGIIGGNGAGKSTL
HCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCEEEEECCCCCHHHH
TDIITGRQSADAGTVEIGSTVHIGYFDQHSEALLAAMDNNQRVIDYIKAAGELVKLEGGA
HHHHCCCCCCCCCEEEECCEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCE
VITASQMLERFLFAPNQQYVPLEQLSGGEKRRLFLLRELMAAPNVLILDEPTNDLDVPTL
EEEHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH
AVLEEYLEDFSGCVIAVSHDRYFLDRVVDTIFAFEENGQIRQYPGNYSVYLEHKKAEEDA
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCHHHH
QAAMAKFAKPSPAAKPKSTEMPSLDRPRKLSSKEKRELQTLEAKIAQMEDERTQLEQSLG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
STDPGNFTQANAVYERMGELTRHLDEATERWMHLAELDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLISLQSVHKSLGLKVLLQGATFSLEAGDKVGLIGTNGSGKSTLLKILAGLEAVDAGQI
CCCHHHHHHHHCCEEEEEECCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCE
QMGHGARVVYLPQQPELDPERTVIEQVFADSGERMDLVREYEQLVAKLAHHADDPVLNTR
EECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LASLMQRMETGGAWELETQAKIVLTKLGIVDFEAKVGTLSGGYRRRIALATALLAEPDVL
HHHHHHHHHCCCCEEECCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEE
LLDEPTNHLDALSVEWLQSYLGRFRGAVVLVTHDRYFLDKVTGRILELDRGELTAYSGNY
EEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCEEEECCCE
AYYLEKKALAEEAEASSQRKHRGVLRRELEWLKRGPKARSTKQKARIERARALQDQQFRQ
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
AKGKVEIATPGRRIGSKVIELENVSKAHNGRTLIDRFSYKFTPEDRLGIIGGNGAGKSTL
HCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEECCCCCEEEEECCCCCHHHH
TDIITGRQSADAGTVEIGSTVHIGYFDQHSEALLAAMDNNQRVIDYIKAAGELVKLEGGA
HHHHCCCCCCCCCEEEECCEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEECCCE
VITASQMLERFLFAPNQQYVPLEQLSGGEKRRLFLLRELMAAPNVLILDEPTNDLDVPTL
EEEHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHH
AVLEEYLEDFSGCVIAVSHDRYFLDRVVDTIFAFEENGQIRQYPGNYSVYLEHKKAEEDA
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCHHHH
QAAMAKFAKPSPAAKPKSTEMPSLDRPRKLSSKEKRELQTLEAKIAQMEDERTQLEQSLG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
STDPGNFTQANAVYERMGELTRHLDEATERWMHLAELDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]