Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is ybhG [C]
Identifier: 37520064
GI number: 37520064
Start: 531732
End: 533042
Strand: Reverse
Name: ybhG [C]
Synonym: gll0495
Alternate gene names: 37520064
Gene position: 533042-531732 (Counterclockwise)
Preceding gene: 37520065
Following gene: 37520063
Centisome position: 11.44
GC content: 65.14
Gene sequence:
>1311_bases ATGGCGACATCCCAGCTGAACGCTGAGTTCAAATGGCCGGCGCTGTGGCGCTGGTTGCTTGTGGGCGTTGGTGTGGTCGG GGTAGCGGTGGCGATCTTTACGTTTGCCATTCCCCGACCCGATCCGGCAGCCAAGTTCGAGAAATTTTTGACCGCCGCGG AGCGCATCAGCACCGACGTGCGCATCACCTCCGCGGGCCAGGTGGCTCCCAACCGCAAGGTCAACGTCGGCCCCAAGGAG GCGGGCTTGTTGACGAAGCTCTACGTCGATCAAGGCGACGCGGTCCGCGAGGGACAAGTGCTCGCCCAGATGGATGCCAG TCGAATCGTCAGCGAAGTGGCGGCGGCCAAAGCGGCGCGCGATCTGGCCGCGGCGCAGTACCAGGAGGCGCGCAACGGTT TTCGGCCCCAGGAGATCGACCAGGTGCGCGCGGATCTGCGCGCCGCCCAGGCCAACGTCGACATCGCCGGCAACAACCTG GTGCGCGAGGAGCGGCTTTTCACCGAGCGGGCGATCGCCGAGACCCAGGTGATCAACCGCCGCCTGGAATTCTCCCGCGC CCAGGACGCCCTCAAGGCGGCCCAGGAAAAATTCAGTCTCTACAAAGCCGGCACCCGCAACGAACAGGTGCTCGCAGCCA AGGCCCGGCTCGACCAGGCCGAGGCGACCTACCGCAACAACCGGACGCGCCTCGCGGATCTGACCATCCGCGCACCCTTC TCGGGTATCATCTCCCAGCGCTATGCCCAGCCGGGGGCGTTCGTCTCGCCAACGGTCAACACCTCGGGCGATTCGGCCAA CTCCAGTTCGATCTTGCTGCTGATTGATCGGCTGGAGGTGCTCGCCACCGTGGCCGAGTCGGACATCGCCCGCATCAAGG TGGGCCAGCCGGTGCAAATCACCACCTCGGCCTACCCGGGCACCGTCTTCAAGGGCACCGTGCGGCTGGTGGCCCCCGAG GCGGTCACCGAAAGCGGCATCACCCAGTTTCAGGTGCGCGTGCGCCTGGATGACGAAGCGGCCCGCACCCTCAAGTCGCG CCTGAATGTGACGGTCAACTTCGTCGCGGGCCGGGTGAACGGCGTGCTGGTGGTGCCGACGACGGCACTGATCACCCGCG ACGGCAAAACCGGTGTGCTGGTCCCCGACGCCAAAAAAGGCCCGACCTACCGCGAGGTGGGTACCGGTGTGAGCCTGGGG GACAAAACCCAGATCCTGAGCGGCCTGAGCGATGGCGAGAAACTCTTTGCCAAGTTGCCTCCCGATGTCAACATCGAGGA AGTCCTGGGCAAGAGCAACGACTTTAGATAA
Upstream 100 bases:
>100_bases TTTTTGTTCACTGGTTGGAGAGGACCGGGATTATCGCTAGCAGCGCCTGCCGGGCGCCTGTTAGCCTGGCTATGGTGGCA ACGAGTGGGAGAAGACCAGA
Downstream 100 bases:
>100_bases GCTCTCCCGCACTACTCGGAGATCCGGCCTTGGACTGGTACGAGAATCTCAAACTGGCCGCCGCGACCCTCTGGGCCAGC CGACTGCGGACCATTCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MATSQLNAEFKWPALWRWLLVGVGVVGVAVAIFTFAIPRPDPAAKFEKFLTAAERISTDVRITSAGQVAPNRKVNVGPKE AGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAARDLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNL VREERLFTERAIAETQVINRRLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYRNNRTRLADLTIRAPF SGIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQPVQITTSAYPGTVFKGTVRLVAPE AVTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVAGRVNGVLVVPTTALITRDGKTGVLVPDAKKGPTYREVGTGVSLG DKTQILSGLSDGEKLFAKLPPDVNIEEVLGKSNDFR
Sequences:
>Translated_436_residues MATSQLNAEFKWPALWRWLLVGVGVVGVAVAIFTFAIPRPDPAAKFEKFLTAAERISTDVRITSAGQVAPNRKVNVGPKE AGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAARDLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNL VREERLFTERAIAETQVINRRLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYRNNRTRLADLTIRAPF SGIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQPVQITTSAYPGTVFKGTVRLVAPE AVTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVAGRVNGVLVVPTTALITRDGKTGVLVPDAKKGPTYREVGTGVSLG DKTQILSGLSDGEKLFAKLPPDVNIEEVLGKSNDFR >Mature_435_residues ATSQLNAEFKWPALWRWLLVGVGVVGVAVAIFTFAIPRPDPAAKFEKFLTAAERISTDVRITSAGQVAPNRKVNVGPKEA GLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAARDLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNLV REERLFTERAIAETQVINRRLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYRNNRTRLADLTIRAPFS GIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQPVQITTSAYPGTVFKGTVRLVAPEA VTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVAGRVNGVLVVPTTALITRDGKTGVLVPDAKKGPTYREVGTGVSLGD KTQILSGLSDGEKLFAKLPPDVNIEEVLGKSNDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=250, Percent_Identity=33.2, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789041, Length=313, Percent_Identity=25.5591054313099, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 47168; Mature: 47037
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSQLNAEFKWPALWRWLLVGVGVVGVAVAIFTFAIPRPDPAAKFEKFLTAAERISTDV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE RITSAGQVAPNRKVNVGPKEAGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAAR EEEECCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNLVREERLFTERAIAETQVINR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH RLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYRNNRTRLADLTIRAPF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEEEECCH SGIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQPVQI HHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHEEECCCCEEE TTSAYPGTVFKGTVRLVAPEAVTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVAGRVN EECCCCCCEEECEEEEECCHHHHHCCCEEEEEEEEECHHHHHHHHHHCCEEEEEEEECCC GVLVVPTTALITRDGKTGVLVPDAKKGPTYREVGTGVSLGDKTQILSGLSDGEKLFAKLP CEEEECCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCHHHHHCCC PDVNIEEVLGKSNDFR CCCCHHHHHCCCCCCC >Mature Secondary Structure ATSQLNAEFKWPALWRWLLVGVGVVGVAVAIFTFAIPRPDPAAKFEKFLTAAERISTDV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCE RITSAGQVAPNRKVNVGPKEAGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAAKAAR EEEECCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNLVREERLFTERAIAETQVINR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHH RLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYRNNRTRLADLTIRAPF HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEEEECCH SGIISQRYAQPGAFVSPTVNTSGDSANSSSILLLIDRLEVLATVAESDIARIKVGQPVQI HHHHHHHHCCCCCEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCHHEEECCCCEEE TTSAYPGTVFKGTVRLVAPEAVTESGITQFQVRVRLDDEAARTLKSRLNVTVNFVAGRVN EECCCCCCEEECEEEEECCHHHHHCCCEEEEEEEEECHHHHHHHHHHCCEEEEEEEECCC GVLVVPTTALITRDGKTGVLVPDAKKGPTYREVGTGVSLGDKTQILSGLSDGEKLFAKLP CEEEECCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCHHHHHCCC PDVNIEEVLGKSNDFR CCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA