Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is gpmB [H]

Identifier: 34498666

GI number: 34498666

Start: 3492680

End: 3493321

Strand: Direct

Name: gpmB [H]

Synonym: CV_3211

Alternate gene names: 34498666

Gene position: 3492680-3493321 (Clockwise)

Preceding gene: 34498665

Following gene: 34498667

Centisome position: 73.51

GC content: 66.04

Gene sequence:

>642_bases
ATGACTCAGCCCGTTACCCGCTTCTGCCTGGTTCGCCACGGCGAAACCGACTGGAACCGCGAATACCGGCTGCAAGGCCA
TACCGACATCCCCCTCAACCACGCCGGACTGGAGCAGGCCAGCCAGCTGGCCCATGCCTTCCGGCCCGACCACGCCTTCC
AGGCGCTCTATGTCAGCGACCTGATCCGCACCCGGCAAACCTCGGCGCCGCTGCAAACCCGGCTGCAGTTGAACGCCCAC
TACACGCCGCAGCTGCGCGAGCGCCACATGGGCGCGCTGCAGGGCCTCACTTATGCGGAAGCCGCCGAGCAAATTCCCGA
CCTCTACCGCCGGCACCAGGCGCGCGATCCCGACTTCGACCTGGAAGGCGGCGAAAGCCTGCGCCGTTTCCGCGCCCGCA
TTCTGGACGGTCTCGCCAGCATCGCAGCCCTGCATCCCGGCGAGAACGTGCTGATCGTCACCCACGGCGGCGTGCTGGAC
ATCGTCTACCGCGCCGCCACCTCAAAACCATTGGAAGAAAAACGCGACTTCCCCATTCCCAACGCCGCGCTGAACTGGCT
GGACTACCAAAACGGCGGCTGGACGCTGCGCCGCTGGGCCGACGAATCCCACCTCAGCAGCGCGCTGGACGAAATCCAGT
AA

Upstream 100 bases:

>100_bases
TGCTGGACTTCGTCGGCGCCATGACCGACAACTACGCCGCCAATCTGGCGCGCGAACTGTCCGGCGTCGGCATTCTGTAG
ATACTCGAAGAAAGGCGACA

Downstream 100 bases:

>100_bases
CCCCGCCGCGGCGCGCGTCCGGAACCACGCCTCCACGCGCCGGCGGGAATTTGTTAGTCTCCGGTAAGAAAGCCGCCCGC
GCGGCGACCAACCATCAAGC

Product: phosphoglycerate mutase 2

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTQPVTRFCLVRHGETDWNREYRLQGHTDIPLNHAGLEQASQLAHAFRPDHAFQALYVSDLIRTRQTSAPLQTRLQLNAH
YTPQLRERHMGALQGLTYAEAAEQIPDLYRRHQARDPDFDLEGGESLRRFRARILDGLASIAALHPGENVLIVTHGGVLD
IVYRAATSKPLEEKRDFPIPNAALNWLDYQNGGWTLRRWADESHLSSALDEIQ

Sequences:

>Translated_213_residues
MTQPVTRFCLVRHGETDWNREYRLQGHTDIPLNHAGLEQASQLAHAFRPDHAFQALYVSDLIRTRQTSAPLQTRLQLNAH
YTPQLRERHMGALQGLTYAEAAEQIPDLYRRHQARDPDFDLEGGESLRRFRARILDGLASIAALHPGENVLIVTHGGVLD
IVYRAATSKPLEEKRDFPIPNAALNWLDYQNGGWTLRRWADESHLSSALDEIQ
>Mature_212_residues
TQPVTRFCLVRHGETDWNREYRLQGHTDIPLNHAGLEQASQLAHAFRPDHAFQALYVSDLIRTRQTSAPLQTRLQLNAHY
TPQLRERHMGALQGLTYAEAAEQIPDLYRRHQARDPDFDLEGGESLRRFRARILDGLASIAALHPGENVLIVTHGGVLDI
VYRAATSKPLEEKRDFPIPNAALNWLDYQNGGWTLRRWADESHLSSALDEIQ

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=210, Percent_Identity=31.9047619047619, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1786970, Length=210, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786857, Length=191, Percent_Identity=25.6544502617801, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324857, Length=210, Percent_Identity=30.4761904761905, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 24291; Mature: 24159

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00024 HEMOPEXIN ; PS00175 PG_MUTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPVTRFCLVRHGETDWNREYRLQGHTDIPLNHAGLEQASQLAHAFRPDHAFQALYVSD
CCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIRTRQTSAPLQTRLQLNAHYTPQLRERHMGALQGLTYAEAAEQIPDLYRRHQARDPDFD
HHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
LEGGESLRRFRARILDGLASIAALHPGENVLIVTHGGVLDIVYRAATSKPLEEKRDFPIP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHCCCCCC
NAALNWLDYQNGGWTLRRWADESHLSSALDEIQ
HHHHHHEECCCCCEEEEHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TQPVTRFCLVRHGETDWNREYRLQGHTDIPLNHAGLEQASQLAHAFRPDHAFQALYVSD
CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
LIRTRQTSAPLQTRLQLNAHYTPQLRERHMGALQGLTYAEAAEQIPDLYRRHQARDPDFD
HHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
LEGGESLRRFRARILDGLASIAALHPGENVLIVTHGGVLDIVYRAATSKPLEEKRDFPIP
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHCCCCCC
NAALNWLDYQNGGWTLRRWADESHLSSALDEIQ
HHHHHHEECCCCCEEEEHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA