| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498272
Identifier: 34498272
GI number: 34498272
Start: 3067906
End: 3068223
Strand: Reverse
Name: 34498272
Synonym: CV_2817
Alternate gene names: NA
Gene position: 3068223-3067906 (Counterclockwise)
Preceding gene: 34498273
Following gene: 34498267
Centisome position: 64.58
GC content: 68.87
Gene sequence:
>318_bases ATGGGGATGATCAGGTTTTTGTTGTTGTTTTGCGTGTTTTGCGCCGCGGTGCTGGCGGCGAGTTGGCATGAGCTGGAAAG CGAGCCGGCGCCGCCGCGGCCCTGCGTGGTCTGCGTGGAGAACGCCGCGGCGCGCGCCGCGCCCCCTGAGCCGCGCGACG GCGTGGAGCGGTTGGCGCAGGCCGCGGAGCTGATGTCGCGTAGCGAGAGCATGCGCGACGCCAAGAAGTGGTTCGCGCTG GACCTGCTGGTGCTGGGCGTGGCGGTGCTGTGTCTGCTGGGCTATCTGCGCGGCCTGCGGGAGCGGGAGGATTTGTAG
Upstream 100 bases:
>100_bases TGGCGCGTGGCCGCCAGCCGGAAATCGCCGCAGGGGCCCATGCCCGGCGGCGATTGTTTTTGTGCTGGGCGGATGAGGTC GGCGCGCGCGGGCGCGCCGG
Downstream 100 bases:
>100_bases CCGCCGAGAAAACGGCGCCAAGCCTGAGGCTGGCGCCGTTTTTCATGCCGGGCACGGCTGGCCGCGCGCCGGGGCCGCAA GGTTTACAAGACTTCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MGMIRFLLLFCVFCAAVLAASWHELESEPAPPRPCVVCVENAAARAAPPEPRDGVERLAQAAELMSRSESMRDAKKWFAL DLLVLGVAVLCLLGYLRGLREREDL
Sequences:
>Translated_105_residues MGMIRFLLLFCVFCAAVLAASWHELESEPAPPRPCVVCVENAAARAAPPEPRDGVERLAQAAELMSRSESMRDAKKWFAL DLLVLGVAVLCLLGYLRGLREREDL >Mature_104_residues GMIRFLLLFCVFCAAVLAASWHELESEPAPPRPCVVCVENAAARAAPPEPRDGVERLAQAAELMSRSESMRDAKKWFALD LLVLGVAVLCLLGYLRGLREREDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11599; Mature: 11468
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMIRFLLLFCVFCAAVLAASWHELESEPAPPRPCVVCVENAAARAAPPEPRDGVERLAQ CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHH AAELMSRSESMRDAKKWFALDLLVLGVAVLCLLGYLRGLREREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GMIRFLLLFCVFCAAVLAASWHELESEPAPPRPCVVCVENAAARAAPPEPRDGVERLAQ CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHCCCCCCCHHHHHHHHH AAELMSRSESMRDAKKWFALDLLVLGVAVLCLLGYLRGLREREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA