Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498261

Identifier: 34498261

GI number: 34498261

Start: 3058987

End: 3059796

Strand: Reverse

Name: 34498261

Synonym: CV_2806

Alternate gene names: NA

Gene position: 3059796-3058987 (Counterclockwise)

Preceding gene: 34498264

Following gene: 34498259

Centisome position: 64.4

GC content: 60.25

Gene sequence:

>810_bases
ATGCTGGCTGTCCTGTCGCTTTGCGCGGGCCAAGCGTTTTCCCAGACGCCGGCAGGAAGCGGACGCGGTGCAGGCGAGAT
TCGGGTGGCCACGTTCGATTATTGCCCCTATGTGTGCAATCCGGATGCCGAGGGCGGCAGGCTGGGCATCGCCGTCGACG
TGATCAAGGAAATATACGAGCCGCTTGGCTATCGGCTTGTCTTCCGCAATTCCAATTTCAAGCGCGCGCTCTTGAGCGTC
GAGGATGGCTCGTTCGACATCATTCCGATGCTGAATCCCGGCAATTCGAAAGATATCGCGCTGTCCGGCAGCCAGTGGAT
CAGCCTGGTGCAGACCTTTTACGTGAAGAAGGGCAGCGCCTGGCGGTACCATGGGATCGTGTCGCTGCAAGGGCGGGTGA
CCGGGTCCATCGTCGGATACAACTATGACAGCGTGTCTCCAGAATACGAACGCTATCTGGAGGCCCACCATAAGGAGAAC
GACGGCGCCGTCGTTTACGTGGCGTCCGGCGACTCCATCCTGAACGTGCTCAAGCTGATGGAGGCGGGGCGGATAGACGT
GTTCAACGAGGATTCGTTCACCGTCGACTACCTGATCGCCAAGCACCATCTGAACGGCAAGTTCGCCAGCGCCGGGGTGC
TGGGTTTTCTGCCGCAGTACACCGGTTTTTCCCGGAAGAACCCGCGAACGCCGGAACTGATCGCCGCTTTCGACAAGGGA
GTCCGGCGCATCGTCCATTCCGGACGGTTCAACGACATCCTGCTCAAGTACGGCCTGAAGCCGGCCAGCCAGGCGGGCGA
AAAGCGCTGA

Upstream 100 bases:

>100_bases
GATGGGGAGGCAGGATGGGGCGGAGCATCTATCATGGAATGACCCGGGAAGGCTGGGCATTAGCCTGATGACGGAGAGAG
TGCCGATGAGGTGGCGCATG

Downstream 100 bases:

>100_bases
ATGCCCGCGCGGGTCAGGCCCGTTCGAACTCGCTCAGCAGAAAGTCTGCTCAGCCGCCGTATCCGCGCCGGCCCCCCAGA
AGGTGGCTTCGGAGGCGCCC

Product: amino acid ABC transporter

Products: NA

Alternate protein names: Amino Acid ABC Transporter; ABC-Type Amino Acid Transport/Signal Transduction System

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLAVLSLCAGQAFSQTPAGSGRGAGEIRVATFDYCPYVCNPDAEGGRLGIAVDVIKEIYEPLGYRLVFRNSNFKRALLSV
EDGSFDIIPMLNPGNSKDIALSGSQWISLVQTFYVKKGSAWRYHGIVSLQGRVTGSIVGYNYDSVSPEYERYLEAHHKEN
DGAVVYVASGDSILNVLKLMEAGRIDVFNEDSFTVDYLIAKHHLNGKFASAGVLGFLPQYTGFSRKNPRTPELIAAFDKG
VRRIVHSGRFNDILLKYGLKPASQAGEKR

Sequences:

>Translated_269_residues
MLAVLSLCAGQAFSQTPAGSGRGAGEIRVATFDYCPYVCNPDAEGGRLGIAVDVIKEIYEPLGYRLVFRNSNFKRALLSV
EDGSFDIIPMLNPGNSKDIALSGSQWISLVQTFYVKKGSAWRYHGIVSLQGRVTGSIVGYNYDSVSPEYERYLEAHHKEN
DGAVVYVASGDSILNVLKLMEAGRIDVFNEDSFTVDYLIAKHHLNGKFASAGVLGFLPQYTGFSRKNPRTPELIAAFDKG
VRRIVHSGRFNDILLKYGLKPASQAGEKR
>Mature_269_residues
MLAVLSLCAGQAFSQTPAGSGRGAGEIRVATFDYCPYVCNPDAEGGRLGIAVDVIKEIYEPLGYRLVFRNSNFKRALLSV
EDGSFDIIPMLNPGNSKDIALSGSQWISLVQTFYVKKGSAWRYHGIVSLQGRVTGSIVGYNYDSVSPEYERYLEAHHKEN
DGAVVYVASGDSILNVLKLMEAGRIDVFNEDSFTVDYLIAKHHLNGKFASAGVLGFLPQYTGFSRKNPRTPELIAAFDKG
VRRIVHSGRFNDILLKYGLKPASQAGEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29524; Mature: 29524

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVLSLCAGQAFSQTPAGSGRGAGEIRVATFDYCPYVCNPDAEGGRLGIAVDVIKEIYE
CHHEEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEHHHHHHHHHHH
PLGYRLVFRNSNFKRALLSVEDGSFDIIPMLNPGNSKDIALSGSQWISLVQTFYVKKGSA
CCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCC
WRYHGIVSLQGRVTGSIVGYNYDSVSPEYERYLEAHHKENDGAVVYVASGDSILNVLKLM
EEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
EAGRIDVFNEDSFTVDYLIAKHHLNGKFASAGVLGFLPQYTGFSRKNPRTPELIAAFDKG
HCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
VRRIVHSGRFNDILLKYGLKPASQAGEKR
HHHHHHCCCCCHHHEECCCCCHHHCCCCC
>Mature Secondary Structure
MLAVLSLCAGQAFSQTPAGSGRGAGEIRVATFDYCPYVCNPDAEGGRLGIAVDVIKEIYE
CHHEEEHHCCCCCCCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCEEEHHHHHHHHHHH
PLGYRLVFRNSNFKRALLSVEDGSFDIIPMLNPGNSKDIALSGSQWISLVQTFYVKKGSA
CCCEEEEEECCCCEEEEEEECCCCEEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCC
WRYHGIVSLQGRVTGSIVGYNYDSVSPEYERYLEAHHKENDGAVVYVASGDSILNVLKLM
EEEEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHH
EAGRIDVFNEDSFTVDYLIAKHHLNGKFASAGVLGFLPQYTGFSRKNPRTPELIAAFDKG
HCCCCEEECCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
VRRIVHSGRFNDILLKYGLKPASQAGEKR
HHHHHHCCCCCHHHEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA