| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498256
Identifier: 34498256
GI number: 34498256
Start: 3035602
End: 3036447
Strand: Reverse
Name: 34498256
Synonym: CV_2801
Alternate gene names: NA
Gene position: 3036447-3035602 (Counterclockwise)
Preceding gene: 34498257
Following gene: 34498255
Centisome position: 63.91
GC content: 57.21
Gene sequence:
>846_bases GTGCGCTCCGCTATCGGCTTCGGTTTGGCCGTGGCTTGGCTCACATCCGCCCTGGCCGCAGGCACGGCCGCGGATCTGGC TTCGAGTCGGACCTATGCGGTCTTGCAAAAAGGCGAGGCGGTTTTTCAGGAAAACGCCAAGCTCGCGCCGAATGGTGTAT TTCAATATCGACTGTATCTCAACGGCGTTTCCAATGCGTCCGCGCCGACGCTAAAGCTGTCGGGCAGGGGCGGATCCAAG GCGGTGCCGCTTGGCGCGAGGCAGGTTTTCTCTCTGCCGGGAACGGCGGAAAAGTCGGATGCCTCATTGAAATTGATGGT GTCGCCGGCGAGCGAGAACATCAACTGGCGAGCGGAGGTGAGCACACCGGGCCTGCCGGCAGGGACCAGGCGATTGGGCG ATCTGCGTTTGGAGTGCTTGGTGGATGTCAAAAGCAATCTGAATGGGCTGAATGAAGGCAAGGTCGACTGCATGCCCGCC GCGGCTAAGGAGGCTTACTGCATGGAGGATATGCACAATTGCGCCAAATATGTGCCAGCCGCAGTCGGCGCGGCGGTTTT GGATGCGATCAAAGGGGTTGCTAGGTTGGAAGTGGAGAACGACCCTTACGAGGCCAAGCCATTCAGTTATTTGTTCATTG CCGACAGACCTTTATTTTCCATTTCCTTGCAGCAGGGCGGGCGCAGGCTGGTATTGCCGACAGAGTGGCTTTATGGACTG CGGCAGCAACGGAGTCCGTTCTTCCACTGGCCTTACCCAAAGCAATATCTTTATTCGCTTCCGCTGAGCGATGCTTCTTG GTCTAACGATGCGCTGGTGGTCTTCGAATATATGGATCCAGTTTGA
Upstream 100 bases:
>100_bases GCCGCCCGTCTGGCGGATTGCGTTTTAATTTCAAATGAATAGAATATGCAATTCAAAAAATCAAACGTCACAGTGAGGCG AGATGACAGGCAAATGTGCA
Downstream 100 bases:
>100_bases GCCGGGGAGGGAGAGCATGGCGCTAAGGATGGGGATGAGGCCAGCTGGAAGGCTGTTTGGCGTAATGGCGCTGGGTATTT TGTTGTCGGCCTGCGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRSAIGFGLAVAWLTSALAAGTAADLASSRTYAVLQKGEAVFQENAKLAPNGVFQYRLYLNGVSNASAPTLKLSGRGGSK AVPLGARQVFSLPGTAEKSDASLKLMVSPASENINWRAEVSTPGLPAGTRRLGDLRLECLVDVKSNLNGLNEGKVDCMPA AAKEAYCMEDMHNCAKYVPAAVGAAVLDAIKGVARLEVENDPYEAKPFSYLFIADRPLFSISLQQGGRRLVLPTEWLYGL RQQRSPFFHWPYPKQYLYSLPLSDASWSNDALVVFEYMDPV
Sequences:
>Translated_281_residues MRSAIGFGLAVAWLTSALAAGTAADLASSRTYAVLQKGEAVFQENAKLAPNGVFQYRLYLNGVSNASAPTLKLSGRGGSK AVPLGARQVFSLPGTAEKSDASLKLMVSPASENINWRAEVSTPGLPAGTRRLGDLRLECLVDVKSNLNGLNEGKVDCMPA AAKEAYCMEDMHNCAKYVPAAVGAAVLDAIKGVARLEVENDPYEAKPFSYLFIADRPLFSISLQQGGRRLVLPTEWLYGL RQQRSPFFHWPYPKQYLYSLPLSDASWSNDALVVFEYMDPV >Mature_281_residues MRSAIGFGLAVAWLTSALAAGTAADLASSRTYAVLQKGEAVFQENAKLAPNGVFQYRLYLNGVSNASAPTLKLSGRGGSK AVPLGARQVFSLPGTAEKSDASLKLMVSPASENINWRAEVSTPGLPAGTRRLGDLRLECLVDVKSNLNGLNEGKVDCMPA AAKEAYCMEDMHNCAKYVPAAVGAAVLDAIKGVARLEVENDPYEAKPFSYLFIADRPLFSISLQQGGRRLVLPTEWLYGL RQQRSPFFHWPYPKQYLYSLPLSDASWSNDALVVFEYMDPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30456; Mature: 30456
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAIGFGLAVAWLTSALAAGTAADLASSRTYAVLQKGEAVFQENAKLAPNGVFQYRLYL CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEHHCCHHHHHCCCCCCCCCEEEEEEEE NGVSNASAPTLKLSGRGGSKAVPLGARQVFSLPGTAEKSDASLKLMVSPASENINWRAEV ECCCCCCCCEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE STPGLPAGTRRLGDLRLECLVDVKSNLNGLNEGKVDCMPAAAKEAYCMEDMHNCAKYVPA CCCCCCCCHHHHHHEEEEEEEEHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH AVGAAVLDAIKGVARLEVENDPYEAKPFSYLFIADRPLFSISLQQGGRRLVLPTEWLYGL HHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECHHHHHHH RQQRSPFFHWPYPKQYLYSLPLSDASWSNDALVVFEYMDPV HHHCCCCEECCCCHHHEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MRSAIGFGLAVAWLTSALAAGTAADLASSRTYAVLQKGEAVFQENAKLAPNGVFQYRLYL CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCEEEEHHCCHHHHHCCCCCCCCCEEEEEEEE NGVSNASAPTLKLSGRGGSKAVPLGARQVFSLPGTAEKSDASLKLMVSPASENINWRAEV ECCCCCCCCEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEEE STPGLPAGTRRLGDLRLECLVDVKSNLNGLNEGKVDCMPAAAKEAYCMEDMHNCAKYVPA CCCCCCCCHHHHHHEEEEEEEEHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHH AVGAAVLDAIKGVARLEVENDPYEAKPFSYLFIADRPLFSISLQQGGRRLVLPTEWLYGL HHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECHHHHHHH RQQRSPFFHWPYPKQYLYSLPLSDASWSNDALVVFEYMDPV HHHCCCCEECCCCHHHEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA