Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34498190

Identifier: 34498190

GI number: 34498190

Start: 2970934

End: 2972313

Strand: Reverse

Name: 34498190

Synonym: CV_2735

Alternate gene names: NA

Gene position: 2972313-2970934 (Counterclockwise)

Preceding gene: 34498191

Following gene: 34498186

Centisome position: 62.56

GC content: 71.01

Gene sequence:

>1380_bases
TTGTCTTGGCGGGTTTGCGGTTTACCAGCGGCCGCCGAGCGCGGCGATCAGCGCCACGCTGCCGGCGTACTGGCGGTTCA
CCACGTTCCACAGATTGTTCTCGGCGGCGATGCGGGCATTCTGCGCCGACAGCACGTTCAGGTAGGCGACGGTTCCAGCC
TGGTATTGGTTCATCGCGATGGTTTCCGCCCGTTTGGCCGCCGCCAGCGCCGCCGTCTGCATGCCGGACTCCTCCTTCAG
CAGGCTTTGCGCGGACAGATTGTCTTCGACGCCTTGCAGCGCCGCCAGCACGGTCTGGCGGTAGCTGGCCACGCTGGCGT
CGTAGTTGGCGATCGCCTGCTCGGTCTGGGCGCGGCGCAGGCCGGCGTCGAACAGCGTCAGCGCCAGCGACGGGCCGACC
GACCAGATGCGGTTGGGCAGCGTCACCCAGTCGGCGAAGGTGGAGCCGCGGTAGCCGCCGCTGGCGCCCAGCGTCAGCGT
GGGGAAGAAGGCGGCTTTGGCGATGCCGATCTGGGCATTGGCGACCGCCATATTCCGTTCCGCCGCGGCCACGTCCGGCC
GGCGCTCCAGCAGCGCCGAGGGGATGCCGGCCGGAATCTGCGGCAGGTGCGGCGTCTCGGCGGCCGGCGGCAGCGAGAAG
CTGGCCGGCGCCTGGCCGAGCTGGGCGGCGATCGCGTGCTCCAGCTGGGCGCGGGTCAGCTGCTTGTCCACCACCGAGGC
CTGCGCGGCGTGCCACTGGCTTTCCGCCGAGGCCACAGCCTCGTCGCCGACGATGCCGGCGGCGAACTGGTTGCGGGTCA
GCTTCAGCGCCTCGCCCAGCGCTTTCTCGCTGTCGCGCAGATTGGCCAGTTGCCTGTCGGCCACCACCAGTTGCAGGTAG
GCCGTGGCGAGCTGGGCCTGGCTGCTCAATCGAATGGCGGCCAGCTGGGCCTCGGAGGCCTGCTGCTTGGCCTTGCCGGC
CTCCACTTCGCGCCGCACCGCGCCCCACAGATCCACTTCCCAGCTGGCGGACAGGCCCAGGTTGTAACTGGTGGCCGCGC
CGTCGCCCGGCGCGCTCACGCCATGGCTCCGGGACGCGTTGGCCGACAGCGACGGGAACAGGCCGGCTTGTGCCTGGCGC
AGCTGGGCCTGGGCCGCGCGGTACTGCGCCTCGGCCTGGGAGATGGTGGGGCTCTGCTGGTTCAGCGTGTCCATCAGGCG
GTTCAGCGTCGGGTCCTGGAACACCGTCCACCAGTCGCCGCGCGGCATCGCGTCCTGCGGCTCGGCGCTCTTCCAGCGGC
CGTCCTCCTTGAATTGGGCGGGAATGTCGAGCTTGGGCCTGGCGTAGTCCGGGCCGATCGCGCAGCCGGCCAGCGCCAGC
GCCGCCAGCGCGGCGCATAG

Upstream 100 bases:

>100_bases
CTGGGGATGGAGGATGACGCGTTCTGGGCGGCGGTGAAACAGGGCCTGGCGCAGCGCTAGCCGGCTTCCGGCGATAAAAA
AACCGGGCGCAGGCCCGGTT

Downstream 100 bases:

>100_bases
TTTCTGCGGCGTTGTTGTTCTATTCATGGCAATCATTCCTCTTTGCCGGCGGCCAAGGCCGGGCCGCGGCCGCCGCGCCA
CTTCAGGCACCACAGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQ
QALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQR
GEEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG
LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAG
LHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQA
VQRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA

Sequences:

>Translated_459_residues
MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQ
QALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQR
GEEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG
LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAG
LHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQA
VQRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA
>Mature_458_residues
SWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQQ
ALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRG
EEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRGL
RGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAGL
HFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAV
QRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48774; Mature: 48643

Theoretical pI: Translated: 12.55; Mature: 12.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRD
CCCEECCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHCEEEECCCCEEEEEECC
GFRPFGRRQRRRLHAGLLLQQALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQ
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCEEECCHHHHCCHHH
AGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRGEEGGFGDADLGIGDRHIPF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC
RRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG
CCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGL
CCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCE
AAQSNGGQLGLGGLLLGLAGLHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRV
EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHCCCCHH
GRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAVQRRVLEHRPPVAARHRVLR
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA
HHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRD
CCEECCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHCEEEECCCCEEEEEECC
GFRPFGRRQRRRLHAGLLLQQALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQ
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCEEECCHHHHCCHHH
AGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRGEEGGFGDADLGIGDRHIPF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC
RRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG
CCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC
LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGL
CCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCE
AAQSNGGQLGLGGLLLGLAGLHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRV
EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHCCCCHH
GRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAVQRRVLEHRPPVAARHRVLR
HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA
HHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA