| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498190
Identifier: 34498190
GI number: 34498190
Start: 2970934
End: 2972313
Strand: Reverse
Name: 34498190
Synonym: CV_2735
Alternate gene names: NA
Gene position: 2972313-2970934 (Counterclockwise)
Preceding gene: 34498191
Following gene: 34498186
Centisome position: 62.56
GC content: 71.01
Gene sequence:
>1380_bases TTGTCTTGGCGGGTTTGCGGTTTACCAGCGGCCGCCGAGCGCGGCGATCAGCGCCACGCTGCCGGCGTACTGGCGGTTCA CCACGTTCCACAGATTGTTCTCGGCGGCGATGCGGGCATTCTGCGCCGACAGCACGTTCAGGTAGGCGACGGTTCCAGCC TGGTATTGGTTCATCGCGATGGTTTCCGCCCGTTTGGCCGCCGCCAGCGCCGCCGTCTGCATGCCGGACTCCTCCTTCAG CAGGCTTTGCGCGGACAGATTGTCTTCGACGCCTTGCAGCGCCGCCAGCACGGTCTGGCGGTAGCTGGCCACGCTGGCGT CGTAGTTGGCGATCGCCTGCTCGGTCTGGGCGCGGCGCAGGCCGGCGTCGAACAGCGTCAGCGCCAGCGACGGGCCGACC GACCAGATGCGGTTGGGCAGCGTCACCCAGTCGGCGAAGGTGGAGCCGCGGTAGCCGCCGCTGGCGCCCAGCGTCAGCGT GGGGAAGAAGGCGGCTTTGGCGATGCCGATCTGGGCATTGGCGACCGCCATATTCCGTTCCGCCGCGGCCACGTCCGGCC GGCGCTCCAGCAGCGCCGAGGGGATGCCGGCCGGAATCTGCGGCAGGTGCGGCGTCTCGGCGGCCGGCGGCAGCGAGAAG CTGGCCGGCGCCTGGCCGAGCTGGGCGGCGATCGCGTGCTCCAGCTGGGCGCGGGTCAGCTGCTTGTCCACCACCGAGGC CTGCGCGGCGTGCCACTGGCTTTCCGCCGAGGCCACAGCCTCGTCGCCGACGATGCCGGCGGCGAACTGGTTGCGGGTCA GCTTCAGCGCCTCGCCCAGCGCTTTCTCGCTGTCGCGCAGATTGGCCAGTTGCCTGTCGGCCACCACCAGTTGCAGGTAG GCCGTGGCGAGCTGGGCCTGGCTGCTCAATCGAATGGCGGCCAGCTGGGCCTCGGAGGCCTGCTGCTTGGCCTTGCCGGC CTCCACTTCGCGCCGCACCGCGCCCCACAGATCCACTTCCCAGCTGGCGGACAGGCCCAGGTTGTAACTGGTGGCCGCGC CGTCGCCCGGCGCGCTCACGCCATGGCTCCGGGACGCGTTGGCCGACAGCGACGGGAACAGGCCGGCTTGTGCCTGGCGC AGCTGGGCCTGGGCCGCGCGGTACTGCGCCTCGGCCTGGGAGATGGTGGGGCTCTGCTGGTTCAGCGTGTCCATCAGGCG GTTCAGCGTCGGGTCCTGGAACACCGTCCACCAGTCGCCGCGCGGCATCGCGTCCTGCGGCTCGGCGCTCTTCCAGCGGC CGTCCTCCTTGAATTGGGCGGGAATGTCGAGCTTGGGCCTGGCGTAGTCCGGGCCGATCGCGCAGCCGGCCAGCGCCAGC GCCGCCAGCGCGGCGCATAG
Upstream 100 bases:
>100_bases CTGGGGATGGAGGATGACGCGTTCTGGGCGGCGGTGAAACAGGGCCTGGCGCAGCGCTAGCCGGCTTCCGGCGATAAAAA AACCGGGCGCAGGCCCGGTT
Downstream 100 bases:
>100_bases TTTCTGCGGCGTTGTTGTTCTATTCATGGCAATCATTCCTCTTTGCCGGCGGCCAAGGCCGGGCCGCGGCCGCCGCGCCA CTTCAGGCACCACAGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQ QALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQR GEEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAG LHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQA VQRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA
Sequences:
>Translated_459_residues MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQ QALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQR GEEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAG LHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQA VQRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA >Mature_458_residues SWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRDGFRPFGRRQRRRLHAGLLLQQ ALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQAGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRG EEGGFGDADLGIGDRHIPFRRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRGL RGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGLAAQSNGGQLGLGGLLLGLAGL HFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRVGRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAV QRRVLEHRPPVAARHRVLRLGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48774; Mature: 48643
Theoretical pI: Translated: 12.55; Mature: 12.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRD CCCEECCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHCEEEECCCCEEEEEECC GFRPFGRRQRRRLHAGLLLQQALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQ CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCEEECCHHHHCCHHH AGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRGEEGGFGDADLGIGDRHIPF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC RRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG CCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGL CCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCE AAQSNGGQLGLGGLLLGLAGLHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRV EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHCCCCHH GRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAVQRRVLEHRPPVAARHRVLR HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA HHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SWRVCGLPAAAERGDQRHAAGVLAVHHVPQIVLGGDAGILRRQHVQVGDGSSLVLVHRD CCEECCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCHHHHHHCEEEECCCCEEEEEECC GFRPFGRRQRRRLHAGLLLQQALRGQIVFDALQRRQHGLAVAGHAGVVVGDRLLGLGAAQ CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCEEECCHHHHCCHHH AGVEQRQRQRRADRPDAVGQRHPVGEGGAAVAAAGAQRQRGEEGGFGDADLGIGDRHIPF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCC RRGHVRPALQQRRGDAGRNLRQVRRLGGRRQREAGRRLAELGGDRVLQLGAGQLLVHHRG CCCCCCHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCEEEEECCC LRGVPLAFRRGHSLVADDAGGELVAGQLQRLAQRFLAVAQIGQLPVGHHQLQVGRGELGL CCCCCHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCE AAQSNGGQLGLGGLLLGLAGLHFAPHRAPQIHFPAGGQAQVVTGGRAVARRAHAMAPGRV EECCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCHHHHHHHHHCCCCHH GRQRREQAGLCLAQLGLGRAVLRLGLGDGGALLVQRVHQAVQRRVLEHRPPVAARHRVLR HHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LGALPAAVLLELGGNVELGPGVVRADRAAGQRQRRQRGA HHCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA