Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
---|---|
Accession | NC_005085 |
Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498153
Identifier: 34498153
GI number: 34498153
Start: 2922021
End: 2922488
Strand: Reverse
Name: 34498153
Synonym: CV_2698
Alternate gene names: NA
Gene position: 2922488-2922021 (Counterclockwise)
Preceding gene: 34498156
Following gene: 34498152
Centisome position: 61.51
GC content: 63.89
Gene sequence:
>468_bases ATGGAAACCCGTCCTCCGCTGCCGCCGTTTACCCGCGAAACTGCGATCGAAAAAATCCGCCTGGCCGAAGACGGCTGGAA CAGCCGCGACCCGGCGCGCGTGGCGCAGGCCTACAGCCTGGACACCCGTTGGCGCAACCGCGTCGATTTTCCGCGCGGCC GGGCCGAGGCGCAGGCCATGCTGGCGCGCAAGTGGAAGCGAGAGCTGGACTACCGGCTGATCAAGGAATTGTGGGCGTTC GACGGCAATCGCATTGCGGTGCGTTTCGCCTACGAATGGCGAGACGATGCCGGCCAGTGGTACCGCAGCTATGGCAACGA GAACTGGGAATTCGGCGTCGACGGCTTGATGATCGATCGCCATGCCAGCATCAACGACATGCCTATCGCCGAGTCCGAAC GCAAATTCTTTTGGCCGCTGGGGCGGCGGCCGGACGATCATCCCGGGCTCAGCGAACTGGGGATGTAG
Upstream 100 bases:
>100_bases ATCGTTTTCATATCGCCATTGTAGACAGATTTGTCTACTTGGGTCTAGACTGGTTTGCATGTAGACAATTCTGTCTACTT AACTTGAAAAGGAAACCATT
Downstream 100 bases:
>100_bases GAAAGGCCCGGGCGCCGGCCATGCCTGGCGCGAATCGGCCGCTTGTGTAGCCTGGCTCAAGCCCGGTTTGGCGTGAGGCC TGCAAGCCGGTCGCGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues METRPPLPPFTRETAIEKIRLAEDGWNSRDPARVAQAYSLDTRWRNRVDFPRGRAEAQAMLARKWKRELDYRLIKELWAF DGNRIAVRFAYEWRDDAGQWYRSYGNENWEFGVDGLMIDRHASINDMPIAESERKFFWPLGRRPDDHPGLSELGM
Sequences:
>Translated_155_residues METRPPLPPFTRETAIEKIRLAEDGWNSRDPARVAQAYSLDTRWRNRVDFPRGRAEAQAMLARKWKRELDYRLIKELWAF DGNRIAVRFAYEWRDDAGQWYRSYGNENWEFGVDGLMIDRHASINDMPIAESERKFFWPLGRRPDDHPGLSELGM >Mature_155_residues METRPPLPPFTRETAIEKIRLAEDGWNSRDPARVAQAYSLDTRWRNRVDFPRGRAEAQAMLARKWKRELDYRLIKELWAF DGNRIAVRFAYEWRDDAGQWYRSYGNENWEFGVDGLMIDRHASINDMPIAESERKFFWPLGRRPDDHPGLSELGM
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18417; Mature: 18417
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METRPPLPPFTRETAIEKIRLAEDGWNSRDPARVAQAYSLDTRWRNRVDFPRGRAEAQAM CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH LARKWKRELDYRLIKELWAFDGNRIAVRFAYEWRDDAGQWYRSYGNENWEFGVDGLMIDR HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEC HASINDMPIAESERKFFWPLGRRPDDHPGLSELGM CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCC >Mature Secondary Structure METRPPLPPFTRETAIEKIRLAEDGWNSRDPARVAQAYSLDTRWRNRVDFPRGRAEAQAM CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHH LARKWKRELDYRLIKELWAFDGNRIAVRFAYEWRDDAGQWYRSYGNENWEFGVDGLMIDR HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEC HASINDMPIAESERKFFWPLGRRPDDHPGLSELGM CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA