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The map label for this gene is lumQ [H]

Identifier: 34498109

GI number: 34498109

Start: 2866365

End: 2867075

Strand: Reverse

Name: lumQ [H]

Synonym: CV_2654

Alternate gene names: 34498109

Gene position: 2867075-2866365 (Counterclockwise)

Preceding gene: 34498110

Following gene: 34498108

Centisome position: 60.35

GC content: 70.6

Gene sequence:

>711_bases
ATGCCTCGTCCCCGCGTCGAGTTGCTGCATTACGGCAGCGACAGCGTCCGCCACGCCCATGCCTGCCATCACCAGTGGGT
GTTCGGCCTTTCCGGCTCGCTGGAGCTGGAAATGGAAGGCCGGCCTTACCTGAACGGCGCGGGCTGGGCGGTGTGCATTC
CCGCCGGCGTGTCGCATTGCTACGCGGGCTCAGCCGGCAATCGGCAGCTGGTGCTGAATGTCCCCGCCTTGAGCGACGGC
CGGGACGACGCGGCGCGCCAGCTGATCCTGCCTCCCGCCGCGCGCGAACTGGCGGAGTGGGCGGCGCGGCATCCGCAGCC
GCAGGCGCGGCAGAGCGCGCTGGCGGGCATGCTGATGGATTTGCTGTTTGCCGACGCGCCGTCGGCCTTCCGCTTGTCTT
CGCGGCTGGACCGTTTCCTGGATGGCCGTCTGGCGCGGCCGCTGGCGGTCGCCGACATGGCGGAGGCCTGCCATCTGTCG
TCCAGCCAGTTCCACGCGCGGCTGAAGGCGGAAACCGGCCTGACGCCGATGGCCTACCTGTGCCGGATGCGGATGGAGCG
GGCGCGGGCATTGTTGCGGGACAGCCGCGCCAGCGTGCTGGATGTGGCGCTGCAGGTGGGCTACCAGTCGGCCTCCGCTT
TCGGCGCCGCTTACCGGCAGCGCTTCGGCGCCAGCCCAAGCGAAGGGCGGGGCAGAGTCCGGCGTGCTTAA

Upstream 100 bases:

>100_bases
AGCCGGATCCCGGCGCGGGCGTTGACACGGCGGCGGCTTCCGTTATGCTCGCCTGCATTGAACTGATTGCAAAAGCTTTT
TCCCGCACATGTCTTTCCCC

Downstream 100 bases:

>100_bases
ACCGTAGCCTCGCGCGCGTTGCGCCGGCGCGTTTCGGACATACTGCGGCCATGTTTGACTGCATCGAGAACGCAAAATGT
CCGAACCGAACAACATAAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MPRPRVELLHYGSDSVRHAHACHHQWVFGLSGSLELEMEGRPYLNGAGWAVCIPAGVSHCYAGSAGNRQLVLNVPALSDG
RDDAARQLILPPAARELAEWAARHPQPQARQSALAGMLMDLLFADAPSAFRLSSRLDRFLDGRLARPLAVADMAEACHLS
SSQFHARLKAETGLTPMAYLCRMRMERARALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVRRA

Sequences:

>Translated_236_residues
MPRPRVELLHYGSDSVRHAHACHHQWVFGLSGSLELEMEGRPYLNGAGWAVCIPAGVSHCYAGSAGNRQLVLNVPALSDG
RDDAARQLILPPAARELAEWAARHPQPQARQSALAGMLMDLLFADAPSAFRLSSRLDRFLDGRLARPLAVADMAEACHLS
SSQFHARLKAETGLTPMAYLCRMRMERARALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVRRA
>Mature_235_residues
PRPRVELLHYGSDSVRHAHACHHQWVFGLSGSLELEMEGRPYLNGAGWAVCIPAGVSHCYAGSAGNRQLVLNVPALSDGR
DDAARQLILPPAARELAEWAARHPQPQARQSALAGMLMDLLFADAPSAFRLSSRLDRFLDGRLARPLAVADMAEACHLSS
SQFHARLKAETGLTPMAYLCRMRMERARALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVRRA

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=92, Percent_Identity=38.0434782608696, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87082197, Length=105, Percent_Identity=31.4285714285714, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 25771; Mature: 25640

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPRVELLHYGSDSVRHAHACHHQWVFGLSGSLELEMEGRPYLNGAGWAVCIPAGVSHC
CCCCCEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCEEEEECCCCHHH
YAGSAGNRQLVLNVPALSDGRDDAARQLILPPAARELAEWAARHPQPQARQSALAGMLMD
HCCCCCCCEEEEECCCCCCCCCHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLFADAPSAFRLSSRLDRFLDGRLARPLAVADMAEACHLSSSQFHARLKAETGLTPMAYL
HHHHCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
CRMRMERARALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRPRVELLHYGSDSVRHAHACHHQWVFGLSGSLELEMEGRPYLNGAGWAVCIPAGVSHC
CCCCEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCEEEEECCCCHHH
YAGSAGNRQLVLNVPALSDGRDDAARQLILPPAARELAEWAARHPQPQARQSALAGMLMD
HCCCCCCCEEEEECCCCCCCCCHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLFADAPSAFRLSSRLDRFLDGRLARPLAVADMAEACHLSSSQFHARLKAETGLTPMAYL
HHHHCCCHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHH
CRMRMERARALLRDSRASVLDVALQVGYQSASAFGAAYRQRFGASPSEGRGRVRRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]