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The map label for this gene is yccA [C]

Identifier: 34498097

GI number: 34498097

Start: 2852349

End: 2853038

Strand: Reverse

Name: yccA [C]

Synonym: CV_2642

Alternate gene names: 34498097

Gene position: 2853038-2852349 (Counterclockwise)

Preceding gene: 34498098

Following gene: 34498094

Centisome position: 60.05

GC content: 62.17

Gene sequence:

>690_bases
ATGCACCCGGATTTTCAAACGGCCTACCAATCGACCCCGATGGCCGATGTTCGCAACAAGGTGTTGCGCAACACCTACGG
CTTGCTGGGCCTGTCGATGATTCCGACCGTGATGGGCGCCATCGTGGGCACCCACATGAGTTTCGCCTTCCTGGCCGGCA
GCCCCATCATCGGCATGCTGCTGATCATGGCGGTGTTCTACGGCCTGGTATTCGCGATCGAGAAGAACCGCTACAGCTCG
CTGGGCGTGTTCCTGATGCTGGGCTTCACCTTCATGATGGGCGTGCTGCTCGGACCCTTGCTGCAATTCGCGCTCAAGTT
CTCCAACGGCGGCCAGCTGATCATGACCGCCGGCGCGGCCACCTCCGCGGTGTTCTTCGTGATGGCCGGCATCGCCACCA
CCACCAAGCGCGACCTGTCCGGCCTGGGCAACTTCCTGACCGTGGGCGCCATCGTGCTGATGGTGGCCGTGGTGGCCAAC
CTGTTCCTGCGCATGCCGGGCTTCCAACTGATGATCGCCGCGGCCTTCGCGCTGTTCAGCTCGCTGATGATCCTGTGGCA
GGTCAAGACCGTGGTCGACGGCGGCGAGAACAGCTACATTTCCGCCGCGCTGTCCATTTACATCAGCATCTACAACCTGT
TCACCAGCTTGCTGCAGCTGCTGCTGGCCTTCGCCGGCAACCGCGACTGA

Upstream 100 bases:

>100_bases
ACAAGCAGGAATAGGTTGGGGAAACTTATTTCCTTCGGCATGGTCTGTTGCTTACAATCCCAACAGCAGTTCCAGAATAA
TCAACTCAGGAGAGTTTCAC

Downstream 100 bases:

>100_bases
GCGGCCCGGATACCGGCAATCGAAACCCTCCGCCCCGGCGGAGGGTTTTTTCATGGCGGCGCGCGGGTAAAAAAACGGCG
GCGCCGAGAATCAGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MHPDFQTAYQSTPMADVRNKVLRNTYGLLGLSMIPTVMGAIVGTHMSFAFLAGSPIIGMLLIMAVFYGLVFAIEKNRYSS
LGVFLMLGFTFMMGVLLGPLLQFALKFSNGGQLIMTAGAATSAVFFVMAGIATTTKRDLSGLGNFLTVGAIVLMVAVVAN
LFLRMPGFQLMIAAAFALFSSLMILWQVKTVVDGGENSYISAALSIYISIYNLFTSLLQLLLAFAGNRD

Sequences:

>Translated_229_residues
MHPDFQTAYQSTPMADVRNKVLRNTYGLLGLSMIPTVMGAIVGTHMSFAFLAGSPIIGMLLIMAVFYGLVFAIEKNRYSS
LGVFLMLGFTFMMGVLLGPLLQFALKFSNGGQLIMTAGAATSAVFFVMAGIATTTKRDLSGLGNFLTVGAIVLMVAVVAN
LFLRMPGFQLMIAAAFALFSSLMILWQVKTVVDGGENSYISAALSIYISIYNLFTSLLQLLLAFAGNRD
>Mature_229_residues
MHPDFQTAYQSTPMADVRNKVLRNTYGLLGLSMIPTVMGAIVGTHMSFAFLAGSPIIGMLLIMAVFYGLVFAIEKNRYSS
LGVFLMLGFTFMMGVLLGPLLQFALKFSNGGQLIMTAGAATSAVFFVMAGIATTTKRDLSGLGNFLTVGAIVLMVAVVAN
LFLRMPGFQLMIAAAFALFSSLMILWQVKTVVDGGENSYISAALSIYISIYNLFTSLLQLLLAFAGNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787205, Length=211, Percent_Identity=38.8625592417062, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24605; Mature: 24605

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPDFQTAYQSTPMADVRNKVLRNTYGLLGLSMIPTVMGAIVGTHMSFAFLAGSPIIGML
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LIMAVFYGLVFAIEKNRYSSLGVFLMLGFTFMMGVLLGPLLQFALKFSNGGQLIMTAGAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
TSAVFFVMAGIATTTKRDLSGLGNFLTVGAIVLMVAVVANLFLRMPGFQLMIAAAFALFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLMILWQVKTVVDGGENSYISAALSIYISIYNLFTSLLQLLLAFAGNRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHPDFQTAYQSTPMADVRNKVLRNTYGLLGLSMIPTVMGAIVGTHMSFAFLAGSPIIGML
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LIMAVFYGLVFAIEKNRYSSLGVFLMLGFTFMMGVLLGPLLQFALKFSNGGQLIMTAGAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
TSAVFFVMAGIATTTKRDLSGLGNFLTVGAIVLMVAVVANLFLRMPGFQLMIAAAFALFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
SLMILWQVKTVVDGGENSYISAALSIYISIYNLFTSLLQLLLAFAGNRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]