Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498068
Identifier: 34498068
GI number: 34498068
Start: 2820993
End: 2821343
Strand: Reverse
Name: 34498068
Synonym: CV_2613
Alternate gene names: NA
Gene position: 2821343-2820993 (Counterclockwise)
Preceding gene: 34498069
Following gene: 34498055
Centisome position: 59.38
GC content: 67.24
Gene sequence:
>351_bases ATGCAGCGTTCTTTTCGTTTCCAGATCGACGAAACCTTGCTCGAGCTTCTCTCCGTCGCGGAGCGGCCGCTTGAGCTGAT GGTCGGCGCAGGCCATCGCAGCCTGATCGACATCGTCTTGCAACCGGGCGACGCCGAAGCCGTTGTCACGCACGCGGCCG CCTGCTCGGTCCATTGCGTCAGAACCGAGGACGGGGAGCTGGAAATCACTCTGCGGCCCGCGCCTGGCTGGACACCGGCG GACGCGTTCAAGCCGATGCGGGCGCCGAGTCCCGCCGATGGCTTGCCGAAGCCGCGCGGCGGCGATCCGGATCACGTGGT GTTGTCGGGCGCGTCCGGCGGCAACTGGTAG
Upstream 100 bases:
>100_bases TTTCCCGCCGCGGCGCAGTGACTGTTTTTTGAAAGTGGTTTTTGCCGGACAAGGAGAGAATGGCGGCCATCATCTCAACA GGCAGAGGAAATCGCCTTTC
Downstream 100 bases:
>100_bases GCAGTCCGGGCTTAGAGCGGCTGACAAAAATCAGTTTCGAGGCTGAGGCAAGGCGCGCCGACGCAGGCCGTACTTGAGTA CGACAAGTCGGCGCAACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MQRSFRFQIDETLLELLSVAERPLELMVGAGHRSLIDIVLQPGDAEAVVTHAAACSVHCVRTEDGELEITLRPAPGWTPA DAFKPMRAPSPADGLPKPRGGDPDHVVLSGASGGNW
Sequences:
>Translated_116_residues MQRSFRFQIDETLLELLSVAERPLELMVGAGHRSLIDIVLQPGDAEAVVTHAAACSVHCVRTEDGELEITLRPAPGWTPA DAFKPMRAPSPADGLPKPRGGDPDHVVLSGASGGNW >Mature_116_residues MQRSFRFQIDETLLELLSVAERPLELMVGAGHRSLIDIVLQPGDAEAVVTHAAACSVHCVRTEDGELEITLRPAPGWTPA DAFKPMRAPSPADGLPKPRGGDPDHVVLSGASGGNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12376; Mature: 12376
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSFRFQIDETLLELLSVAERPLELMVGAGHRSLIDIVLQPGDAEAVVTHAAACSVHCV CCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEEEE RTEDGELEITLRPAPGWTPADAFKPMRAPSPADGLPKPRGGDPDHVVLSGASGGNW ECCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure MQRSFRFQIDETLLELLSVAERPLELMVGAGHRSLIDIVLQPGDAEAVVTHAAACSVHCV CCCCCEEEHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCEEEEE RTEDGELEITLRPAPGWTPADAFKPMRAPSPADGLPKPRGGDPDHVVLSGASGGNW ECCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA