Click here to switch to the map view.

The map label for this gene is dedD [C]

Identifier: 34497972

GI number: 34497972

Start: 2709684

End: 2710439

Strand: Reverse

Name: dedD [C]

Synonym: CV_2517

Alternate gene names: 34497972

Gene position: 2710439-2709684 (Counterclockwise)

Preceding gene: 34497973

Following gene: 34497971

Centisome position: 57.05

GC content: 70.24

Gene sequence:

>756_bases
ATGGCACTGTCCAGCCACGATGAACTGATATTGCTGAGAAAGCGCGCCCGCCGCCGCTTGGTGGGAGCCGTGGTGCTGGT
TTCCATCGCCACCGTCGTTTTGTGGAACGTGGTGGGCCATCTGCCGGAGCAGCAGATGAAGCCCGAGTCCATCGAGATCA
TGGGCGGCGCGTCCGCGCCGGTGGCCGCTTCGGCACCCGCCGCGGCCGCGAAGCCCGCCGCCTCGCAAGCGGTGGCGGAA
GCCGCCGTCCCGGCGCCCGCGTCCGGCAACGCCACCGAGCTGCCGGCCAATCTGTCGTCCGTCACCGCGCCGCCGCCGGC
GACCGCCAAGCCTGCCCCGGCTCCCGCTGTCGTCGAGAGCAAGCCCAAGGCCGAGCCGAAACCCGAACCCAAGCCTGAGC
CCAAACCCAAGCCGGAGAAGCGCAAGGAAGAGCCGAAGGCCGAAAAGCCGCGCAAGGCGGACCCGGCGGCGATCCTGGAA
GGCCGCGTCGATCCGGACAGCCATGCGGCCAAGGCCGAGCCGGCCCACGGCAAGTCGGTGATCCAGCTGGCGGCGCTGTC
CGACCCGGCCAAGGTGGACGCCTTGCGCGGCAAGCTCGCCGCCATCGGCGTGACCGCCCACTTCTCCAAGGTGGAAACCA
GCAAGGGCGAGGTGACCCGCGTCCGCGTCGGCCCGTTCTCCAGCCAGGCCGAGGCGCAGTCGGCGCTGCAGAAGCTCGCC
CGCGCCGGCATCAACGGCATCATCATCAACAAGTAG

Upstream 100 bases:

>100_bases
TTATCGCGGGCCGGCGACAATGATAGAATCGTTGTTTTCGGATCATTCCACACCGTAGCGGAAGTGGAAGCGGTCCGGCG
TCACCCGGTTTGAGGAATGC

Downstream 100 bases:

>100_bases
CCGCCATGACCGTGTTCGACTATATCGCAATAGCCATCATCGCCGGATCGGTGCTGATGGCCCTGATGCGCGGCCTGATC
GCCGAGGTGCTGTCGTTGGG

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MALSSHDELILLRKRARRRLVGAVVLVSIATVVLWNVVGHLPEQQMKPESIEIMGGASAPVAASAPAAAAKPAASQAVAE
AAVPAPASGNATELPANLSSVTAPPPATAKPAPAPAVVESKPKAEPKPEPKPEPKPKPEKRKEEPKAEKPRKADPAAILE
GRVDPDSHAAKAEPAHGKSVIQLAALSDPAKVDALRGKLAAIGVTAHFSKVETSKGEVTRVRVGPFSSQAEAQSALQKLA
RAGINGIIINK

Sequences:

>Translated_251_residues
MALSSHDELILLRKRARRRLVGAVVLVSIATVVLWNVVGHLPEQQMKPESIEIMGGASAPVAASAPAAAAKPAASQAVAE
AAVPAPASGNATELPANLSSVTAPPPATAKPAPAPAVVESKPKAEPKPEPKPEPKPKPEKRKEEPKAEKPRKADPAAILE
GRVDPDSHAAKAEPAHGKSVIQLAALSDPAKVDALRGKLAAIGVTAHFSKVETSKGEVTRVRVGPFSSQAEAQSALQKLA
RAGINGIIINK
>Mature_250_residues
ALSSHDELILLRKRARRRLVGAVVLVSIATVVLWNVVGHLPEQQMKPESIEIMGGASAPVAASAPAAAAKPAASQAVAEA
AVPAPASGNATELPANLSSVTAPPPATAKPAPAPAVVESKPKAEPKPEPKPEPKPKPEKRKEEPKAEKPRKADPAAILEG
RVDPDSHAAKAEPAHGKSVIQLAALSDPAKVDALRGKLAAIGVTAHFSKVETSKGEVTRVRVGPFSSQAEAQSALQKLAR
AGINGIIINK

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25835; Mature: 25704

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSSHDELILLRKRARRRLVGAVVLVSIATVVLWNVVGHLPEQQMKPESIEIMGGASAP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCC
VAASAPAAAAKPAASQAVAEAAVPAPASGNATELPANLSSVTAPPPATAKPAPAPAVVES
CCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
KPKAEPKPEPKPEPKPKPEKRKEEPKAEKPRKADPAAILEGRVDPDSHAAKAEPAHGKSV
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
IQLAALSDPAKVDALRGKLAAIGVTAHFSKVETSKGEVTRVRVGPFSSQAEAQSALQKLA
EEEECCCCCHHHHHHHCCHHEEEHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RAGINGIIINK
HCCCCEEEECC
>Mature Secondary Structure 
ALSSHDELILLRKRARRRLVGAVVLVSIATVVLWNVVGHLPEQQMKPESIEIMGGASAP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCCC
VAASAPAAAAKPAASQAVAEAAVPAPASGNATELPANLSSVTAPPPATAKPAPAPAVVES
CCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
KPKAEPKPEPKPEPKPKPEKRKEEPKAEKPRKADPAAILEGRVDPDSHAAKAEPAHGKSV
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
IQLAALSDPAKVDALRGKLAAIGVTAHFSKVETSKGEVTRVRVGPFSSQAEAQSALQKLA
EEEECCCCCHHHHHHHCCHHEEEHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RAGINGIIINK
HCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA