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The map label for this gene is rmuC [H]

Identifier: 34497928

GI number: 34497928

Start: 2660401

End: 2661882

Strand: Reverse

Name: rmuC [H]

Synonym: CV_2473

Alternate gene names: 34497928

Gene position: 2661882-2660401 (Counterclockwise)

Preceding gene: 34497929

Following gene: 34497927

Centisome position: 56.03

GC content: 65.05

Gene sequence:

>1482_bases
TTGCGTCAGCAGACGGCGGCGCTGCAGGCGCAGCTGGACGCGCAGCGAGCGCAATGGGAAGAAGCGAAGAGCCGCGAGCA
GGAGGCGAATCGGGCGCTGCAGGCGCAGAGCCAGCAATTGGCCGACAGCCAGACCCAGCTCGGCGCCTACATCGCCCGCG
CCCAGCGCGTGCCGGAGCTGGAAAAACAGCTGCAGGAGCGCGAGCAGGCGCTGGACGCGTCGCAGCGGGAGGCGCGCGGA
CTGGCCTCGCAGTTGGCGGCGAGGGAAGAGCAGGGCAGGGTGCTGGAGGCTCTGGAGGCGCGCAGCCTGCAACAGGGCCA
GGACATCATGCGCCTGACGGCGCGCGAGCAGGAACTGGCCACGCAACTGGACAACGAGCGCCGGCAGAGCCAGGAAAAGC
TGGCGCTGTTGATGGAGGCTCGCCAGACCCTGTCCGACCAGTTCAAAGCCTTGGCCAGCGACATCCTGGAGGAAAAATCC
AAGCGCTTCACCGAACAGAACCAGAACAATCTGGGCGCGCTGCTGAACCCGCTGCACGAACGCATCCAGAATTTCGGCAA
GCTGGTGCAGGACACCTACGACAAGGACAGCAAGGAGCGGTTGACGCTGGAGGCCGAACTCAAGCGCCTGCAGGAGCTGA
ATACCCGTTTGGGCGACGACGCCGTCGCGCTGACCAACGCCTTGACCGGCGCCAGCAGCAAGGCGCAGGGCACCTGGGGC
GAAATGGTGCTGGAGAAGGTGCTGGAGACTTCCGGCCTGACCAAGGACCGCGAGTACCGGGTGCAGGTGTCGGACATCCT
GGAAACCGACGACGGCGGCAAGCGCTACCAGCCCGACGTGGTGATAGACCTGCCGGAAGGCAAGCAGCTGGTGGTCGATT
CCAAAGTGTCGCTGAACGCTTACGTCCGCTACACCGCGGCCGATGGCGAGGAGGCGCGCGAGGCCGAGCTGAAGGGCCAC
ATCGCCGCCATCCGCGCGCACATCCGCACGCTGTCGGACAAGCGTTACCAGGACCTGTACAAGCTGAACACGCTGGACTT
CGTGTTCATGTTCATCCCGGTGGAGCCAGCCTATCTGCTGGCGGTGCAGCACGATATGAGCTTGTTCAACGAGGCCTTCG
AGCGCCGCATCATGATCGTCGGCCCCAGCACGCTGCTGGCCACGCTGCGCACCGTCGCCAGCATCTGGCGCTACGAGTAC
CAGAACCAGAACGCGCAGGAGATCGCGCGCCAAGGCGGGGCGATGTACGACAAATTCGTCGGCTTCGTCGCCAATATGGA
AAAGCTGGGCAAGCAGCTGGACACCAGCCGCGACACCTTCTCCGACGCGATGAAGCAGCTGTCCAGCGGGCGCGGCAATC
TGATGACCAGCGCCGAGAAGCTGCGCAAGCTGGGCATACGGAACAACAAGCAGCTGCCGTCGCAGCTGCGGCTGGAAAGC
GACGAGGGCGAAGACGCCGACGAGGCGCCTGGCGAAGAGTAG

Upstream 100 bases:

>100_bases
TGTGATGGAAATGTTGGTGATCGGCCTGTTGCTGGGCCTGCTGGGCGGCGGCGCCGCGGCCTGGGCCGCGCGCGGACGGC
GCGCCAGGGAGCTGGAGTCG

Downstream 100 bases:

>100_bases
GCGCAGGCCGAGTGGCGGCATCGAAAATACATTATCATGCCGCGTTCCTGTTTTTCATATTGAAGGCAGTCATGGGCAAA
ATCCGGGTGGGTCTGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MRQQTAALQAQLDAQRAQWEEAKSREQEANRALQAQSQQLADSQTQLGAYIARAQRVPELEKQLQEREQALDASQREARG
LASQLAAREEQGRVLEALEARSLQQGQDIMRLTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKS
KRFTEQNQNNLGALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGASSKAQGTWG
EMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLVVDSKVSLNAYVRYTAADGEEAREAELKGH
IAAIRAHIRTLSDKRYQDLYKLNTLDFVFMFIPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEY
QNQNAQEIARQGGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQLPSQLRLES
DEGEDADEAPGEE

Sequences:

>Translated_493_residues
MRQQTAALQAQLDAQRAQWEEAKSREQEANRALQAQSQQLADSQTQLGAYIARAQRVPELEKQLQEREQALDASQREARG
LASQLAAREEQGRVLEALEARSLQQGQDIMRLTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKS
KRFTEQNQNNLGALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGASSKAQGTWG
EMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLVVDSKVSLNAYVRYTAADGEEAREAELKGH
IAAIRAHIRTLSDKRYQDLYKLNTLDFVFMFIPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEY
QNQNAQEIARQGGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQLPSQLRLES
DEGEDADEAPGEE
>Mature_493_residues
MRQQTAALQAQLDAQRAQWEEAKSREQEANRALQAQSQQLADSQTQLGAYIARAQRVPELEKQLQEREQALDASQREARG
LASQLAAREEQGRVLEALEARSLQQGQDIMRLTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKS
KRFTEQNQNNLGALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGASSKAQGTWG
EMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLVVDSKVSLNAYVRYTAADGEEAREAELKGH
IAAIRAHIRTLSDKRYQDLYKLNTLDFVFMFIPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEY
QNQNAQEIARQGGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQLPSQLRLES
DEGEDADEAPGEE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=425, Percent_Identity=42.5882352941177, Blast_Score=326, Evalue=2e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 55751; Mature: 55751

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQQTAALQAQLDAQRAQWEEAKSREQEANRALQAQSQQLADSQTQLGAYIARAQRVPEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EKQLQEREQALDASQREARGLASQLAAREEQGRVLEALEARSLQQGQDIMRLTAREQELA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKSKRFTEQNQNNLGALLNPLHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGASSKAQGTWG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHH
EMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLVVDSKVSLNA
HHHHHHHHHHCCCCCCHHHEEEHHHHHCCCCCCCEECCCEEEECCCCCEEEEECCCCEEE
YVRYTAADGEEAREAELKGHIAAIRAHIRTLSDKRYQDLYKLNTLDFVFMFIPVEPAYLL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHH
AVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQGGAMYDKFV
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH
GFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQLPSQLRLES
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCC
DEGEDADEAPGEE
CCCCCCCCCCCCC
>Mature Secondary Structure
MRQQTAALQAQLDAQRAQWEEAKSREQEANRALQAQSQQLADSQTQLGAYIARAQRVPEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EKQLQEREQALDASQREARGLASQLAAREEQGRVLEALEARSLQQGQDIMRLTAREQELA
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKSKRFTEQNQNNLGALLNPLHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
RIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGASSKAQGTWG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHH
EMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLVVDSKVSLNA
HHHHHHHHHHCCCCCCHHHEEEHHHHHCCCCCCCEECCCEEEECCCCCEEEEECCCCEEE
YVRYTAADGEEAREAELKGHIAAIRAHIRTLSDKRYQDLYKLNTLDFVFMFIPVEPAYLL
EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHH
AVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQGGAMYDKFV
HHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH
GFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQLPSQLRLES
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCC
DEGEDADEAPGEE
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]