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The map label for this gene is mcp4 [H]

Identifier: 34497918

GI number: 34497918

Start: 2649730

End: 2651364

Strand: Reverse

Name: mcp4 [H]

Synonym: CV_2463

Alternate gene names: 34497918

Gene position: 2651364-2649730 (Counterclockwise)

Preceding gene: 34497919

Following gene: 34497916

Centisome position: 55.81

GC content: 66.85

Gene sequence:

>1635_bases
ATGGCCAGAACCCTTTCCTTGAAGCGGCGCCTGTTGCTGCAGACTGTCAGCGCCATTGCCCTGGTCTGCATTCTGGGCAC
CTTGCTGATGAATACCCTGCGCCAGCAGATGCTGGATGACCGGCACGATCAGGTGCGCACCCAGGTGGAAAACGCCGCCA
GCCTGGTGGCGATGCACGAGCGACAGGCCGCAGCGGGCCTGGTGCCCGAGGCGGAGGCGCAGAAGATGGCGATGCGGGAG
CTGGCCAGCCTGCGTTTCGACGGCGACGAGTATTTCTTCACGCTGGACCGCAATCTGAAGTGGCTTTCCCATGGCATGAA
TCCCAAGCTGGTCGGCAAGGACATGCACGGCGTCAAGGACGGAGCGGGCGCCAATATCGGCGCGCTGTTCGAGGATGCGA
TGCGCAAGGGCGGGGGCAAGGGCTTCGTCAACTACGTCTGGGACAAGCCGGGCGCCAGCGCTCCCCAACCCAAGCTCGCC
TACTTCCAGACCACTCCGCGCTGGGGCTGGGTGGTCGGCACCGGGCTGTATCTGGACGACATCAACGCCACGCTGACGCG
GCAGCTGCTCAGCGTGGGCGCGCAGGTGCTGCTGTTCATGGCGGTCAGCCTGTCGCTGGGCTGGTGGGTGTACCGCAGCG
TGATGCGGGAACTGGGAACCGAGCCTTCGGTGGCCGCCGACATCGTGCGCGAGATCGCCGCCGGGAGGCTGGACAGGGAA
ATCGAGGTGGATGCCGGCCATCAGGACAGCCTGCTGGCCCATATCCGCGAGATGCAGGGCCAGCTGCGCCAGTTGGTGGG
CGACATCATGCGCGATGCCGAGGAGCTGGGCCGGCTGAACGCCGACGTGGTGGACGGCGCGCGCATGGTGGCAGGCAATT
CCCAGGGGCAGAGCGAGGGCGCCGCGGCGATGGCGGCCTCGGTGGAGCAACTGACGGTCAGCATCAATCATATCGCCCAG
CACGCGTCGGATGCCCGGACGGTGTCGCAGGACTCCGGCCAGCTGTCCGAGGCCGGCAGCCAGGTGATCGCGCGCGCGGT
GGAGGAAATGCAGGGCATCAGCGCCACCGTGGACCTGACCGAAGCGGCGATTTCGGAGCTGGCGAGCAAGACCGCCACCA
TTTCCAGCATCATGCAGGTGATCAAGGACATCGCCGATCAGACCAATCTGCTGGCCTTGAACGCAGCGATAGAGGCGGCG
CGGGCCGGCGAGACCGGCCGAGGCTTCGCCGTGGTGGCGGACGAGGTGCGCAAGCTGTCGGAGCGCACCGCCAAGGCCAC
CGAGCAGACCGCGGACATGATCGCCGAGATCCAGGCCAGCTCCGACCTGTCGCGCCGCAATATGAGCGATACGGTGGCCA
GGGTGAAGTCGGGGCTGGAGCTGGCGGAGCAGGGCGGCGAGCTGATTCAGCAGCTCCGCGGCAGCGCCGGCCAGGTGGTG
CAGGTGGTCAACGACATTTCGCATGCGCTGCAGGAGCAGGGCACGGCCAGCCAGGACATCGCCCGCCACGTCGAGCAGAT
CGCCCAGGTTGCGTCCGGCAACGCGGTCGCCGCCACCCAGGCCTCGGAAAGCATACAGCGGATAGACGAGGTGACCGGCA
ACCTCAGGCTGTCGGTCGCGCAGTTCCAGGTATAG

Upstream 100 bases:

>100_bases
GATTCCATGACAAAAATCAACAAAATACATTTGAATATTGAAATTGAATAATGGCATCGGTTATCGTAGCCAGTTGTTTA
CAAATTTCGTGAGCGAAAAC

Downstream 100 bases:

>100_bases
CGTCAGCGTCGCAGCGCGTAGCGCGCGGGGTCGGCGGGCCGCGCGCGCTGGCGGTAGAAACGGTCGAGCTCGACGCGGTA
GCGCTGCACGGATTCCGGCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MARTLSLKRRLLLQTVSAIALVCILGTLLMNTLRQQMLDDRHDQVRTQVENAASLVAMHERQAAAGLVPEAEAQKMAMRE
LASLRFDGDEYFFTLDRNLKWLSHGMNPKLVGKDMHGVKDGAGANIGALFEDAMRKGGGKGFVNYVWDKPGASAPQPKLA
YFQTTPRWGWVVGTGLYLDDINATLTRQLLSVGAQVLLFMAVSLSLGWWVYRSVMRELGTEPSVAADIVREIAAGRLDRE
IEVDAGHQDSLLAHIREMQGQLRQLVGDIMRDAEELGRLNADVVDGARMVAGNSQGQSEGAAAMAASVEQLTVSINHIAQ
HASDARTVSQDSGQLSEAGSQVIARAVEEMQGISATVDLTEAAISELASKTATISSIMQVIKDIADQTNLLALNAAIEAA
RAGETGRGFAVVADEVRKLSERTAKATEQTADMIAEIQASSDLSRRNMSDTVARVKSGLELAEQGGELIQQLRGSAGQVV
QVVNDISHALQEQGTASQDIARHVEQIAQVASGNAVAATQASESIQRIDEVTGNLRLSVAQFQV

Sequences:

>Translated_544_residues
MARTLSLKRRLLLQTVSAIALVCILGTLLMNTLRQQMLDDRHDQVRTQVENAASLVAMHERQAAAGLVPEAEAQKMAMRE
LASLRFDGDEYFFTLDRNLKWLSHGMNPKLVGKDMHGVKDGAGANIGALFEDAMRKGGGKGFVNYVWDKPGASAPQPKLA
YFQTTPRWGWVVGTGLYLDDINATLTRQLLSVGAQVLLFMAVSLSLGWWVYRSVMRELGTEPSVAADIVREIAAGRLDRE
IEVDAGHQDSLLAHIREMQGQLRQLVGDIMRDAEELGRLNADVVDGARMVAGNSQGQSEGAAAMAASVEQLTVSINHIAQ
HASDARTVSQDSGQLSEAGSQVIARAVEEMQGISATVDLTEAAISELASKTATISSIMQVIKDIADQTNLLALNAAIEAA
RAGETGRGFAVVADEVRKLSERTAKATEQTADMIAEIQASSDLSRRNMSDTVARVKSGLELAEQGGELIQQLRGSAGQVV
QVVNDISHALQEQGTASQDIARHVEQIAQVASGNAVAATQASESIQRIDEVTGNLRLSVAQFQV
>Mature_543_residues
ARTLSLKRRLLLQTVSAIALVCILGTLLMNTLRQQMLDDRHDQVRTQVENAASLVAMHERQAAAGLVPEAEAQKMAMREL
ASLRFDGDEYFFTLDRNLKWLSHGMNPKLVGKDMHGVKDGAGANIGALFEDAMRKGGGKGFVNYVWDKPGASAPQPKLAY
FQTTPRWGWVVGTGLYLDDINATLTRQLLSVGAQVLLFMAVSLSLGWWVYRSVMRELGTEPSVAADIVREIAAGRLDREI
EVDAGHQDSLLAHIREMQGQLRQLVGDIMRDAEELGRLNADVVDGARMVAGNSQGQSEGAAAMAASVEQLTVSINHIAQH
ASDARTVSQDSGQLSEAGSQVIARAVEEMQGISATVDLTEAAISELASKTATISSIMQVIKDIADQTNLLALNAAIEAAR
AGETGRGFAVVADEVRKLSERTAKATEQTADMIAEIQASSDLSRRNMSDTVARVKSGLELAEQGGELIQQLRGSAGQVVQ
VVNDISHALQEQGTASQDIARHVEQIAQVASGNAVAATQASESIQRIDEVTGNLRLSVAQFQV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=381, Percent_Identity=28.0839895013123, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788194, Length=336, Percent_Identity=30.3571428571429, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1788195, Length=288, Percent_Identity=30.9027777777778, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787690, Length=326, Percent_Identity=32.2085889570552, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1789453, Length=235, Percent_Identity=31.063829787234, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58457; Mature: 58326

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTLSLKRRLLLQTVSAIALVCILGTLLMNTLRQQMLDDRHDQVRTQVENAASLVAMHE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQAAAGLVPEAEAQKMAMRELASLRFDGDEYFFTLDRNLKWLSHGMNPKLVGKDMHGVKD
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCEECCCCCCCCC
GAGANIGALFEDAMRKGGGKGFVNYVWDKPGASAPQPKLAYFQTTPRWGWVVGTGLYLDD
CCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEECCEEEHH
INATLTRQLLSVGAQVLLFMAVSLSLGWWVYRSVMRELGTEPSVAADIVREIAAGRLDRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE
IEVDAGHQDSLLAHIREMQGQLRQLVGDIMRDAEELGRLNADVVDGARMVAGNSQGQSEG
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCHH
AAAMAASVEQLTVSINHIAQHASDARTVSQDSGQLSEAGSQVIARAVEEMQGISATVDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAAISELASKTATISSIMQVIKDIADQTNLLALNAAIEAARAGETGRGFAVVADEVRKLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ERTAKATEQTADMIAEIQASSDLSRRNMSDTVARVKSGLELAEQGGELIQQLRGSAGQVV
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QVVNDISHALQEQGTASQDIARHVEQIAQVASGNAVAATQASESIQRIDEVTGNLRLSVA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEEEHH
QFQV
HHCC
>Mature Secondary Structure 
ARTLSLKRRLLLQTVSAIALVCILGTLLMNTLRQQMLDDRHDQVRTQVENAASLVAMHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQAAAGLVPEAEAQKMAMRELASLRFDGDEYFFTLDRNLKWLSHGMNPKLVGKDMHGVKD
HHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCCEECCCCCCCCC
GAGANIGALFEDAMRKGGGKGFVNYVWDKPGASAPQPKLAYFQTTPRWGWVVGTGLYLDD
CCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCEEEECCEEEHH
INATLTRQLLSVGAQVLLFMAVSLSLGWWVYRSVMRELGTEPSVAADIVREIAAGRLDRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE
IEVDAGHQDSLLAHIREMQGQLRQLVGDIMRDAEELGRLNADVVDGARMVAGNSQGQSEG
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHCCCCCCCCCHH
AAAMAASVEQLTVSINHIAQHASDARTVSQDSGQLSEAGSQVIARAVEEMQGISATVDLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
EAAISELASKTATISSIMQVIKDIADQTNLLALNAAIEAARAGETGRGFAVVADEVRKLS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHH
ERTAKATEQTADMIAEIQASSDLSRRNMSDTVARVKSGLELAEQGGELIQQLRGSAGQVV
HHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QVVNDISHALQEQGTASQDIARHVEQIAQVASGNAVAATQASESIQRIDEVTGNLRLSVA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCEEEHH
QFQV
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]