| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ybhG [C]
Identifier: 34497915
GI number: 34497915
Start: 2646883
End: 2647863
Strand: Reverse
Name: ybhG [C]
Synonym: CV_2460
Alternate gene names: 34497915
Gene position: 2647863-2646883 (Counterclockwise)
Preceding gene: 34497916
Following gene: 34497914
Centisome position: 55.73
GC content: 69.52
Gene sequence:
>981_bases ATGAAAAAATGGATGATTCCCGCGGCGCTGTTGCTGGCCGCCTCGCTGGCAGGCGGCTATTACCTTTACCAGCGGCAGGC GGAGGCGGCGCGCCAGGGCACGCTTTACGGCAATGTCGACATCCGCGAGGTGGTGCTGGCCTTTCGCGTCTCCGGCAGAT TGTCCTCGGTCCAGGTGGACGAGGGCGACAGTGTGCAGCCGGGGCAGATTCTCGCCAGGCTCGACGTCGAGCCATTGAAG AACAACCTGAACGCCGCGCTGGCCAACGAGGCGGCCAGCGCGGCGCGCAATGCGCTGATGCGCAAGGGCAACCGTAGCGA GGACATCGCCCAGGCGCGCTCCCGGCTGTATGCGGCCCAGGCCGCAGTCGTCCAGGCCGACAGCGAATACAAGCGCCAGC GCGACCTGGTGCCGGCCGGCGGCAGCAGCCGGCAGTCGTTGGAGGCCGCCCGCTCGCAACGCGACCAGTCCGTGGCCCAG CGCGATGCCGCCATCCAGCAGCTGAAGGCGCTCGCCGCCGGCTTCCGTCCCGAGGAAATCGCCGAGTCCGACGCCCAGCT GAAGCAGGCGCGGGCCAATGTCGCCGCCGCGCGCCTGGCGCTCAAGGACGCCAGCCTGCAGTCCCCCAGCGCCGGCATCA TCCTCGCCCGCGCGGTGGAGGCTGGCAGCATGGTCCAGGCCGGCACGCCGGCATTCACGCTGTCGCTGCGCCAGCCGGTA TGGGTGCGCGCCTACGTCGGAGAAAGCCAGCTCGGCAAGTTCGCAACCGGGACGGAGGTGCAGGTCTCCAGCGACAGCCA CCCCGAGAAAATCTATCGCGGCGTGGTGGGCTTCGTCTCGCCCACCGCGGAGTTCACGCCCAAGTCCGTCGAAACCGCCG ATCTGCGCACCGCGCTGGTCTACCGGATACGCGTGGTGGTCGGCGACGCCGACGCCGGGCTCGGCCAGGGCATGCCGGTG ACGGTAAGGCTGGCGCAGTGA
Upstream 100 bases:
>100_bases GGGCTTCGATTCGGTGCGGTATGCTACCCCATGGCCGCCGCGGCCTGATTCCGGCGCGGCGGCGGGCCGGGTGAGTGATG CCGGCCGAAACGGGGGCATA
Downstream 100 bases:
>100_bases ATGCCTCCATCCACGCCGCAGGCCTGGGCAAACGCTTTTCCGGCGCGGCCGCGGACGCAGTGTCCGGCGTGGAGTTGGCC ATCCCTCCCGGCTGCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKKWMIPAALLLAASLAGGYYLYQRQAEAARQGTLYGNVDIREVVLAFRVSGRLSSVQVDEGDSVQPGQILARLDVEPLK NNLNAALANEAASAARNALMRKGNRSEDIAQARSRLYAAQAAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQ RDAAIQQLKALAAGFRPEEIAESDAQLKQARANVAAARLALKDASLQSPSAGIILARAVEAGSMVQAGTPAFTLSLRQPV WVRAYVGESQLGKFATGTEVQVSSDSHPEKIYRGVVGFVSPTAEFTPKSVETADLRTALVYRIRVVVGDADAGLGQGMPV TVRLAQ
Sequences:
>Translated_326_residues MKKWMIPAALLLAASLAGGYYLYQRQAEAARQGTLYGNVDIREVVLAFRVSGRLSSVQVDEGDSVQPGQILARLDVEPLK NNLNAALANEAASAARNALMRKGNRSEDIAQARSRLYAAQAAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQ RDAAIQQLKALAAGFRPEEIAESDAQLKQARANVAAARLALKDASLQSPSAGIILARAVEAGSMVQAGTPAFTLSLRQPV WVRAYVGESQLGKFATGTEVQVSSDSHPEKIYRGVVGFVSPTAEFTPKSVETADLRTALVYRIRVVVGDADAGLGQGMPV TVRLAQ >Mature_326_residues MKKWMIPAALLLAASLAGGYYLYQRQAEAARQGTLYGNVDIREVVLAFRVSGRLSSVQVDEGDSVQPGQILARLDVEPLK NNLNAALANEAASAARNALMRKGNRSEDIAQARSRLYAAQAAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQ RDAAIQQLKALAAGFRPEEIAESDAQLKQARANVAAARLALKDASLQSPSAGIILARAVEAGSMVQAGTPAFTLSLRQPV WVRAYVGESQLGKFATGTEVQVSSDSHPEKIYRGVVGFVSPTAEFTPKSVETADLRTALVYRIRVVVGDADAGLGQGMPV TVRLAQ
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=306, Percent_Identity=48.3660130718954, Blast_Score=238, Evalue=3e-64, Organism=Escherichia coli, GI1789900, Length=272, Percent_Identity=27.5735294117647, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789041, Length=275, Percent_Identity=26.9090909090909, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788711, Length=285, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790519, Length=264, Percent_Identity=26.1363636363636, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 34774; Mature: 34774
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWMIPAALLLAASLAGGYYLYQRQAEAARQGTLYGNVDIREVVLAFRVSGRLSSVQVD CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEEC EGDSVQPGQILARLDVEPLKNNLNAALANEAASAARNALMRKGNRSEDIAQARSRLYAAQ CCCCCCHHHHHEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQRDAAIQQLKALAAGFRPEEI HHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AESDAQLKQARANVAAARLALKDASLQSPSAGIILARAVEAGSMVQAGTPAFTLSLRQPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCEEEEEECCCE WVRAYVGESQLGKFATGTEVQVSSDSHPEKIYRGVVGFVSPTAEFTPKSVETADLRTALV EEEEECCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHE YRIRVVVGDADAGLGQGMPVTVRLAQ EEEEEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure MKKWMIPAALLLAASLAGGYYLYQRQAEAARQGTLYGNVDIREVVLAFRVSGRLSSVQVD CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHCCCCCEEEEC EGDSVQPGQILARLDVEPLKNNLNAALANEAASAARNALMRKGNRSEDIAQARSRLYAAQ CCCCCCHHHHHEECCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQRDAAIQQLKALAAGFRPEEI HHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH AESDAQLKQARANVAAARLALKDASLQSPSAGIILARAVEAGSMVQAGTPAFTLSLRQPV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCEEEEEECCCE WVRAYVGESQLGKFATGTEVQVSSDSHPEKIYRGVVGFVSPTAEFTPKSVETADLRTALV EEEEECCHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHE YRIRVVVGDADAGLGQGMPVTVRLAQ EEEEEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA