| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863570
Identifier: 33863570
GI number: 33863570
Start: 1390471
End: 1391571
Strand: Reverse
Name: 33863570
Synonym: PMT1302
Alternate gene names: NA
Gene position: 1391571-1390471 (Counterclockwise)
Preceding gene: 33863571
Following gene: 33863569
Centisome position: 57.72
GC content: 53.32
Gene sequence:
>1101_bases ATGGGCAAGACCTTGCTGATTGGCTCTTGTGAGCCATTCAGTGGTAAATCGGCATTGGTTCTTGGTCTCGCTCGCCAGTT GATAGCGGCGAATCAGCCCATTCGCTTTGGGAAGCCTTTGGCCACGAGTGTGGAATGGGATCCCGCAGTTTCCCCTCTGC CCGAACCTTTAATTGATGATGATGTTCGTTTTGTTGGTGCAACCCTGGGTTTGTCTGAGCATCAGCTGATTCCCTCTTTG CATCTCCTGGCAAAGGCAACGGCCGATCACCGTTTGGCCATGTCTCAAATCGATGCTGGCAAAGGATTTGAGGACCTATG CAAACAGCTCGATCTTCATGCTCAGGGCCTCACCATTCTTGAGGCAGCCGGTAGTTTGCATGAAGGCCTGCTTTACGGTC TTAGTCTTGGTCAGCTGGCCCATGGCTTGGATGCCCGCGTCGTGCTGGTGCATCTCTGGCAGGACAGCTGCAGCGTCGAT GCTTTGTTAGCGGCGAAGGAGCAGCTTGGAGATCATCTGGTGGGCATCGTTTTGAATGCGGTAAAACCAGATGAAATTGA TGATCTAGAAACCAATGTGGTGCCTGCCCTGGAGGCCCTTGGACTGGCGGTGTTCGGAGTGATGCCCCATTCGCCACTCT TGCGCAGCGTGACTGTGGGTGAGTTGGTTAGGCGCCTAGGAGCCCGGGTGATCTGTTGCTCTGAGCGACTTGAGCTTCTG GTTGAGACTCTCAGTATCGGAGCCATGAATGTGAATTCCGCCATGGACTTTTTCCGTTGTCGTCGCAACATGGCTGTGGT GACTGGTGCTGACCGTACTGATATTCAGTTGGCGGCCCTCGAGGCTTCGACTCAGTGCTTGATCCTCACTGGTGCAGGGC AACCTTTGCCGCAGTTGATTAGTAGGGCAGAAGAACTTGAGGTTCCTTTACTCAAGGTGGATCACGACACACTGTCTACC GTGGAAGTGATTGAGCAGGCCTTTGGTCATGTGCGACTGCATGAGGCCGTTAAAGCAACCTATTCCTTCCGATTGGTGGA TGAACACTGTGACTTGGACCGTTTGTTTGATGTTCTGGGGTTGCCTATGCAGGGTCGATGA
Upstream 100 bases:
>100_bases GAGACCTGCCCAATCGATTCTGGAAGTGGCTGCTGTTGGGTTCTGAAGAGTCTGTGGGGGACGCCTAAATTGCTCAGCTA TAGGAACACGGAGTCCACTG
Downstream 100 bases:
>100_bases CCACTGCTAGCTTCGATCCATCGTCATGGGGATGTCCTTGAGTCAGTCTCTGGATCTCCCTGACCTTGATCGGGTCGATA CCCTTGCCCAAGAGCTGGCC
Product: BioD-like N-terminal domain of phosphotransacetylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVSPLPEPLIDDDVRFVGATLGLSEHQLIPSL HLLAKATADHRLAMSQIDAGKGFEDLCKQLDLHAQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSCSVD ALLAAKEQLGDHLVGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL VETLSIGAMNVNSAMDFFRCRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLST VEVIEQAFGHVRLHEAVKATYSFRLVDEHCDLDRLFDVLGLPMQGR
Sequences:
>Translated_366_residues MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVSPLPEPLIDDDVRFVGATLGLSEHQLIPSL HLLAKATADHRLAMSQIDAGKGFEDLCKQLDLHAQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSCSVD ALLAAKEQLGDHLVGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL VETLSIGAMNVNSAMDFFRCRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLST VEVIEQAFGHVRLHEAVKATYSFRLVDEHCDLDRLFDVLGLPMQGR >Mature_365_residues GKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVSPLPEPLIDDDVRFVGATLGLSEHQLIPSLH LLAKATADHRLAMSQIDAGKGFEDLCKQLDLHAQGLTILEAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSCSVDA LLAAKEQLGDHLVGIVLNAVKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELLV ETLSIGAMNVNSAMDFFRCRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLISRAEELEVPLLKVDHDTLSTV EVIEQAFGHVRLHEAVKATYSFRLVDEHCDLDRLFDVLGLPMQGR
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 39428; Mature: 39297
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVSPLPEPLIDD CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVRFVGATLGLSEHQLIPSLHLLAKATADHRLAMSQIDAGKGFEDLCKQLDLHAQGLTIL CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSCSVDALLAAKEQLGDHLVGIVLNA HHHCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC VKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHH VETLSIGAMNVNSAMDFFRCRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLI HHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHH SRAEELEVPLLKVDHDTLSTVEVIEQAFGHVRLHEAVKATYSFRLVDEHCDLDRLFDVLG HHHHHCCCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHC LPMQGR CCCCCC >Mature Secondary Structure GKTLLIGSCEPFSGKSALVLGLARQLIAANQPIRFGKPLATSVEWDPAVSPLPEPLIDD CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVRFVGATLGLSEHQLIPSLHLLAKATADHRLAMSQIDAGKGFEDLCKQLDLHAQGLTIL CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH EAAGSLHEGLLYGLSLGQLAHGLDARVVLVHLWQDSCSVDALLAAKEQLGDHLVGIVLNA HHHCHHHHHHHHHCCHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC VKPDEIDDLETNVVPALEALGLAVFGVMPHSPLLRSVTVGELVRRLGARVICCSERLELL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEHHHHHHHH VETLSIGAMNVNSAMDFFRCRRNMAVVTGADRTDIQLAALEASTQCLILTGAGQPLPQLI HHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHH SRAEELEVPLLKVDHDTLSTVEVIEQAFGHVRLHEAVKATYSFRLVDEHCDLDRLFDVLG HHHHHCCCCEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHEEEEHHHCCHHHHHHHHC LPMQGR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]