Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863548

Identifier: 33863548

GI number: 33863548

Start: 1367756

End: 1368193

Strand: Reverse

Name: 33863548

Synonym: PMT1280

Alternate gene names: NA

Gene position: 1368193-1367756 (Counterclockwise)

Preceding gene: 33863554

Following gene: 33863547

Centisome position: 56.75

GC content: 55.25

Gene sequence:

>438_bases
ATGCCGCAAGGAATGCACCTGGAACAGGAGATGACCGTCAATGTTGAACCTGAGCTCACCCTCTTGTTTGACGGGGCTTG
TCCTTTTTGTTGCCGTGAAGTGAGCTTTTTACGCGCTCATGATCGTCACGGCCGCTTGAATTTTGTTGATATTGATTCCT
CTGACTATGAGCCTGAGGCCTTTGCTGGCATCAGTTATCGGCAGGCGATGGGGCGCATGCATGCGTTGCGTCGCAATGGT
GAAGTCGTGCGAGATGTCGCGGTCTTTCGCGAGGCTTATCAATTGGTGGATTGGGGATGGCTCTATGCACCCACGGCCTG
GCCTGGTGTTGCTCGAGTTGTGGATGGGGTCTACAAGATCTGGGCTCGATTACGCCTGCGGCTCACTGGCCGCGAATCCC
TCGATCAGCTATGCCGCTGCCGCATGAAGCGGCTTTAG

Upstream 100 bases:

>100_bases
GTGCTGGCAAAGACAACACTCGCCACTGGATGACCTATGCCTTGATGGCCAGCAATGGTGAGGAATTCCCTTGTGGTTGG
ATGACGTTGACTGATGACTG

Downstream 100 bases:

>100_bases
TTTTTTACTTCTCTTCTGTCTCTCTTTTAAGGGGTAAGGGGGAGTCAATCCCAACGAAAGTTTGGCCTTAGGGCACTCGT
CTGTTTAAGGTTGATGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MPQGMHLEQEMTVNVEPELTLLFDGACPFCCREVSFLRAHDRHGRLNFVDIDSSDYEPEAFAGISYRQAMGRMHALRRNG
EVVRDVAVFREAYQLVDWGWLYAPTAWPGVARVVDGVYKIWARLRLRLTGRESLDQLCRCRMKRL

Sequences:

>Translated_145_residues
MPQGMHLEQEMTVNVEPELTLLFDGACPFCCREVSFLRAHDRHGRLNFVDIDSSDYEPEAFAGISYRQAMGRMHALRRNG
EVVRDVAVFREAYQLVDWGWLYAPTAWPGVARVVDGVYKIWARLRLRLTGRESLDQLCRCRMKRL
>Mature_144_residues
PQGMHLEQEMTVNVEPELTLLFDGACPFCCREVSFLRAHDRHGRLNFVDIDSSDYEPEAFAGISYRQAMGRMHALRRNGE
VVRDVAVFREAYQLVDWGWLYAPTAWPGVARVVDGVYKIWARLRLRLTGRESLDQLCRCRMKRL

Specific function: Unknown

COG id: COG3011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16863; Mature: 16731

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQGMHLEQEMTVNVEPELTLLFDGACPFCCREVSFLRAHDRHGRLNFVDIDSSDYEPEA
CCCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
FAGISYRQAMGRMHALRRNGEVVRDVAVFREAYQLVDWGWLYAPTAWPGVARVVDGVYKI
HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHH
WARLRLRLTGRESLDQLCRCRMKRL
HHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQGMHLEQEMTVNVEPELTLLFDGACPFCCREVSFLRAHDRHGRLNFVDIDSSDYEPEA
CCCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
FAGISYRQAMGRMHALRRNGEVVRDVAVFREAYQLVDWGWLYAPTAWPGVARVVDGVYKI
HHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHH
WARLRLRLTGRESLDQLCRCRMKRL
HHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA