| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863546
Identifier: 33863546
GI number: 33863546
Start: 1365541
End: 1366008
Strand: Reverse
Name: 33863546
Synonym: PMT1278
Alternate gene names: NA
Gene position: 1366008-1365541 (Counterclockwise)
Preceding gene: 33863547
Following gene: 33863544
Centisome position: 56.66
GC content: 47.22
Gene sequence:
>468_bases ATGAAAGGTGTTAACGGCATATTGGCTGCCATTGGCGTCATGCTTTTGGTGTTTATTGTTATCACCATGGGGATAATTCC TGGAGCTAATGTTGTCACTAAGCAAGTTGCTGAAAGTCAGCTTGATGCTAGGGGCGTAGCTAGTGATCAATTGAAGAATA ATCAAGTGGCAATTAATCCAACAGCCACTAATCCAACAGCCACTAATCCAGCAGCCACTAATCCTCTAGCCATTCAGCGA GTGCAAGCTAATTCAGTGACCAGTCAGCAAGTGCCGAATGATCAAGTATCAACAGATGAGACCGCTGTTGAACAGCCGGG CTCTAAATGTGCACCTGGCTGGGTAGAGACAGGCGATGGCATTTTATGTGTGCCTGGATTGTTTAAGATGCTTGATGTTG CTGATACGGGCGGTCCGGGCGAGAAGAATTGTTGGGCTGGAGGGATGGTGCTTAATTGCCGCGACTAA
Upstream 100 bases:
>100_bases AGAAGGATGCGAAAACGCATGGCTCGAGCAAAACGCTTTATTTTCTTTCTTCTGGGATTTCTCCAGGGCCCGTTATGCTT GATACAGCAGAGCGTCGCAA
Downstream 100 bases:
>100_bases AGAATCTTATGCGACTCTATGCATTGTAGTCGCATAAGTTGGTTGGATCTATTTAGGGTTAAACTCCTAGAGCACCTATT TATTGGTATGATTACATTGA
Product: Paralytic/GBP/PSP peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKGVNGILAAIGVMLLVFIVITMGIIPGANVVTKQVAESQLDARGVASDQLKNNQVAINPTATNPTATNPAATNPLAIQR VQANSVTSQQVPNDQVSTDETAVEQPGSKCAPGWVETGDGILCVPGLFKMLDVADTGGPGEKNCWAGGMVLNCRD
Sequences:
>Translated_155_residues MKGVNGILAAIGVMLLVFIVITMGIIPGANVVTKQVAESQLDARGVASDQLKNNQVAINPTATNPTATNPAATNPLAIQR VQANSVTSQQVPNDQVSTDETAVEQPGSKCAPGWVETGDGILCVPGLFKMLDVADTGGPGEKNCWAGGMVLNCRD >Mature_155_residues MKGVNGILAAIGVMLLVFIVITMGIIPGANVVTKQVAESQLDARGVASDQLKNNQVAINPTATNPTATNPAATNPLAIQR VQANSVTSQQVPNDQVSTDETAVEQPGSKCAPGWVETGDGILCVPGLFKMLDVADTGGPGEKNCWAGGMVLNCRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15970; Mature: 15970
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGVNGILAAIGVMLLVFIVITMGIIPGANVVTKQVAESQLDARGVASDQLKNNQVAINP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEC TATNPTATNPAATNPLAIQRVQANSVTSQQVPNDQVSTDETAVEQPGSKCAPGWVETGDG CCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHCCCCCCCCCCEECCCC ILCVPGLFKMLDVADTGGPGEKNCWAGGMVLNCRD EEEHHHHHHHHHHHCCCCCCCCCEEECCEEEEECC >Mature Secondary Structure MKGVNGILAAIGVMLLVFIVITMGIIPGANVVTKQVAESQLDARGVASDQLKNNQVAINP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEC TATNPTATNPAATNPLAIQRVQANSVTSQQVPNDQVSTDETAVEQPGSKCAPGWVETGDG CCCCCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHCCCCCCCCCCEECCCC ILCVPGLFKMLDVADTGGPGEKNCWAGGMVLNCRD EEEHHHHHHHHHHHCCCCCCCCCEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA