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The map label for this gene is yqjB [H]

Identifier: 33863542

GI number: 33863542

Start: 1362863

End: 1363522

Strand: Reverse

Name: yqjB [H]

Synonym: PMT1274

Alternate gene names: 33863542

Gene position: 1363522-1362863 (Counterclockwise)

Preceding gene: 33863543

Following gene: 33863539

Centisome position: 56.56

GC content: 51.97

Gene sequence:

>660_bases
TTGTTGCTCGCTGTTTATCTTGAGACTGATCAGTCTTTGCTGGCCATGTCAAGCCTGTTCCGTCGTCCGTTTTCGCTGTT
GCCTGTTTCATTGATCCTGGCGGGAGCTGTTGCTTTACCAGGCATGGTTCAAGCATCTGTTGAGACCTCAGCGGAAAACA
CTGAAGCATCTGTATCGCCTGAAGTCTCAGCGGAAAAATCTGAATCGTCTGCATCGCCTGAGAGCCCAGCCGATAACTCT
GAAGTGTCTGCATCGCCTGAGATCAGTACGAAAGTTGTCTTGCTGCTTGGTCGTCGTGAAATCAGTGTGATCCGCGATGG
CGAGAAGCTTGGCCCCTGGCCGGTTGCTATTGGTGATCCTCGTACGCCTACTCCTACAGGTGTCTTCAAGGTGGAGAACA
AAGTGATCAATCCGCAATATCAGAGCACCAAATCTGGGCGAGTGAATCCTGCGATTGGGGTTGCTAGTCCCCTTGGCGAT
CGCTGGATTGGCTTTTTGCAAAGTGGTCAGAACCAATTCGGCATTCATGGCACCCCATGGCCCTACTGGGTCAATGCAAA
AGCTGCAGTCACCAATGGCTGTGTGCGCATGCTTCATGCGCATGTACGTCAGTTGTTTGACGTCGTCGAGGTGGGAACAA
CTGTGGAAATCCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCTGCGAAGCCCGTTATCTCGCTGAGATCGATCCAAAACTGGTTGATTGATCCTTGCGGCAATGGTCGTTGGCAGCGAA
TGAACATGGCCTGAACGGTT

Downstream 100 bases:

>100_bases
TCCTTGTCAGCGCAGCCAACAGACTGACGAGTGCTTGATTGATCTCGCTAGCTGGCTCAATAGAGATTGAGAGTAGTCAG
GCTTCTGGCCTGACAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLLAVYLETDQSLLAMSSLFRRPFSLLPVSLILAGAVALPGMVQASVETSAENTEASVSPEVSAEKSESSASPESPADNS
EVSASPEISTKVVLLLGRREISVIRDGEKLGPWPVAIGDPRTPTPTGVFKVENKVINPQYQSTKSGRVNPAIGVASPLGD
RWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVRMLHAHVRQLFDVVEVGTTVEILR

Sequences:

>Translated_219_residues
MLLAVYLETDQSLLAMSSLFRRPFSLLPVSLILAGAVALPGMVQASVETSAENTEASVSPEVSAEKSESSASPESPADNS
EVSASPEISTKVVLLLGRREISVIRDGEKLGPWPVAIGDPRTPTPTGVFKVENKVINPQYQSTKSGRVNPAIGVASPLGD
RWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVRMLHAHVRQLFDVVEVGTTVEILR
>Mature_219_residues
MLLAVYLETDQSLLAMSSLFRRPFSLLPVSLILAGAVALPGMVQASVETSAENTEASVSPEVSAEKSESSASPESPADNS
EVSASPEISTKVVLLLGRREISVIRDGEKLGPWPVAIGDPRTPTPTGVFKVENKVINPQYQSTKSGRVNPAIGVASPLGD
RWIGFLQSGQNQFGIHGTPWPYWVNAKAAVTNGCVRMLHAHVRQLFDVVEVGTTVEILR

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 23446; Mature: 23446

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLAVYLETDQSLLAMSSLFRRPFSLLPVSLILAGAVALPGMVQASVETSAENTEASVSP
CEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
EVSAEKSESSASPESPADNSEVSASPEISTKVVLLLGRREISVIRDGEKLGPWPVAIGDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCC
RTPTPTGVFKVENKVINPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPW
CCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PYWVNAKAAVTNGCVRMLHAHVRQLFDVVEVGTTVEILR
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MLLAVYLETDQSLLAMSSLFRRPFSLLPVSLILAGAVALPGMVQASVETSAENTEASVSP
CEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
EVSAEKSESSASPESPADNSEVSASPEISTKVVLLLGRREISVIRDGEKLGPWPVAIGDP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEECCC
RTPTPTGVFKVENKVINPQYQSTKSGRVNPAIGVASPLGDRWIGFLQSGQNQFGIHGTPW
CCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
PYWVNAKAAVTNGCVRMLHAHVRQLFDVVEVGTTVEILR
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]