| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is psaM
Identifier: 33863489
GI number: 33863489
Start: 1307589
End: 1307699
Strand: Reverse
Name: psaM
Synonym: PMT1220
Alternate gene names: NA
Gene position: 1307699-1307589 (Counterclockwise)
Preceding gene: 33863490
Following gene: 33863488
Centisome position: 54.24
GC content: 50.45
Gene sequence:
>111_bases ATGGGCATCACTGATATTGCAAATGTCGACTTGGCCGGTTTGTGCCTCGTGGTTGTTTTTCATTGCGGTGTGCTAGCTCT TCGCCTTGGCGTAACCCTTCATGAGGCTTGA
Upstream 100 bases:
>100_bases AGGAGTTGCCATTGATAGGTGTGACAGGCCTTTGCGAAGACTGGTCTTAGGTACCGTTTTGCGAGGAGAATATGGATGCT TCTAGCGTTCCCCTTCCATC
Downstream 100 bases:
>100_bases TTGAGGCCCTAAAACTAATTGGGTCTAGCCCCTTGGCAGTTGAGGTTTGCTGCGCTACAAGCGGTCAACCGTTGAATAAA CTTGGGCTCCTCCCTGGCTA
Product: photosystem I reaction centre subunit XII (PsaM)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 35
Protein sequence:
>36_residues MGITDIANVDLAGLCLVVVFHCGVLALRLGVTLHEA
Sequences:
>Translated_36_residues MGITDIANVDLAGLCLVVVFHCGVLALRLGVTLHEA >Mature_35_residues GITDIANVDLAGLCLVVVFHCGVLALRLGVTLHEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3735; Mature: 3603
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGITDIANVDLAGLCLVVVFHCGVLALRLGVTLHEA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure GITDIANVDLAGLCLVVVFHCGVLALRLGVTLHEA CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA