| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863480
Identifier: 33863480
GI number: 33863480
Start: 1297978
End: 1298280
Strand: Reverse
Name: 33863480
Synonym: PMT1211
Alternate gene names: NA
Gene position: 1298280-1297978 (Counterclockwise)
Preceding gene: 33863481
Following gene: 33863478
Centisome position: 53.85
GC content: 48.84
Gene sequence:
>303_bases ATGTTGTCAAGAGATACTCGCCTGCGTTTGCAAGAGATTCTTGCTCGAGTCGCAAGCGATCAGCCCGTTAGCTTAAGTGA ACGGATTTATATTCATAAGTTTGCTGACCGAAACCAGACTGTTGCAACCTGGTTGCATAGAGCGAGGAGAGAACAACAGA AATTGCAACCTCAAGATGGTATTGATCAGTTGCTCGATGCTCTTCAACTTGGCTCGTCCGAACCAGATGATCACTACTGC TCGGAGGATGACGACCTTGGCGAATGGTTTGGCGGAGCTCCGTCCTGGTTAGGTAGGAGCTGA
Upstream 100 bases:
>100_bases TATCGCATGTGAATCTAAATATAAGCTTCTAAAATAAAGTGGTTTTTTCAATGACTTCTCCCCTCTCTACCATTAGAACA GTATTAGTGGTGTTATTTAG
Downstream 100 bases:
>100_bases TCTTCAATTGTAGGTTTTTCTATCACAATGCAATCTGTCTGCACTTAGATTTTTTTTAATTGCAGACGAAACATGACTAA ATTTACGAGAATCGATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MLSRDTRLRLQEILARVASDQPVSLSERIYIHKFADRNQTVATWLHRARREQQKLQPQDGIDQLLDALQLGSSEPDDHYC SEDDDLGEWFGGAPSWLGRS
Sequences:
>Translated_100_residues MLSRDTRLRLQEILARVASDQPVSLSERIYIHKFADRNQTVATWLHRARREQQKLQPQDGIDQLLDALQLGSSEPDDHYC SEDDDLGEWFGGAPSWLGRS >Mature_100_residues MLSRDTRLRLQEILARVASDQPVSLSERIYIHKFADRNQTVATWLHRARREQQKLQPQDGIDQLLDALQLGSSEPDDHYC SEDDDLGEWFGGAPSWLGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11506; Mature: 11506
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRDTRLRLQEILARVASDQPVSLSERIYIHKFADRNQTVATWLHRARREQQKLQPQDG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC IDQLLDALQLGSSEPDDHYCSEDDDLGEWFGGAPSWLGRS HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MLSRDTRLRLQEILARVASDQPVSLSERIYIHKFADRNQTVATWLHRARREQQKLQPQDG CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC IDQLLDALQLGSSEPDDHYCSEDDDLGEWFGGAPSWLGRS HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA