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The map label for this gene is csoS1 [H]

Identifier: 33863469

GI number: 33863469

Start: 1287696

End: 1288310

Strand: Reverse

Name: csoS1 [H]

Synonym: PMT1199

Alternate gene names: 33863469

Gene position: 1288310-1287696 (Counterclockwise)

Preceding gene: 33863470

Following gene: 33863468

Centisome position: 53.44

GC content: 53.17

Gene sequence:

>615_bases
ATGCCAAAACCTTCTTCCTCTAGTTCTTCAGACAGCCCCTCTTTGACGACAGCGAAACCTGCTGGCTCTGAAGTTGCCAA
AAAAGTTCTTCCTGCCAAGGCGACACAAACTGTTGATGTTTCTGCTTCAACATCGTCCTTATCAGGTTCAAAGTCGACTA
CGCGCAGAAGCGCTGCCACAGGGCGTACATCCGCCAGCCGAGCAACGGCTGCGACGCCTGCATCAAGGGGCGGTAAGAGT
GCTGCGGGTTCCAGTGGCAGTGGTTCTGCGTCTGGTGGCGCTATCAAGCCACCCGCCTCTTCCTCTGTGCCTTCTTTTGT
TCAGGGGATTGCACTCGGAATGATTGAAACTCGTGGCATGGTTCCTGCCATTGAAGCGGCTGATGCAATGACAAAAGCTG
CTGAGGTTAATCTCATCTCTAGGGAATATGTTGGTGGTGGTTATGTCACTGTGATGGTGCGTGGCGAAACAGGAGCTGTG
AATGCAGCCGTTCGTGCTGGTGCAGATGCCTGTGAACGGGTTGGTGATGGCCTTGTTGCAGCCCATATTATTGCTCGTCC
TCATCAGGAAGTTGAGCCAGCATTAAGACCCACTCATGCAAAGCGCCGCAGCTAA

Upstream 100 bases:

>100_bases
TGACAATTGGAGGAATTATTGATTACTGGCTGCCAGATGGATAGCTAATAAATGATTCGGATCTGATCCATTTATTCTCT
TCTTCTTAAACCTTTTATCC

Downstream 100 bases:

>100_bases
GTTGGGTAAACCCTAATTTTTAGCTTTCTAATTTGCGGGTTTCTTCTGTGGCGAAGTTATTCGGAAATCTGGTTTGATCA
ACTTTGATGACAAGCATTAA

Product: carboxysome structural protein CsoS1

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPKPSSSSSSDSPSLTTAKPAGSEVAKKVLPAKATQTVDVSASTSSLSGSKSTTRRSAATGRTSASRATAATPASRGGKS
AAGSSGSGSASGGAIKPPASSSVPSFVQGIALGMIETRGMVPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAV
NAAVRAGADACERVGDGLVAAHIIARPHQEVEPALRPTHAKRRS

Sequences:

>Translated_204_residues
MPKPSSSSSSDSPSLTTAKPAGSEVAKKVLPAKATQTVDVSASTSSLSGSKSTTRRSAATGRTSASRATAATPASRGGKS
AAGSSGSGSASGGAIKPPASSSVPSFVQGIALGMIETRGMVPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAV
NAAVRAGADACERVGDGLVAAHIIARPHQEVEPALRPTHAKRRS
>Mature_203_residues
PKPSSSSSSDSPSLTTAKPAGSEVAKKVLPAKATQTVDVSASTSSLSGSKSTTRRSAATGRTSASRATAATPASRGGKSA
AGSSGSGSASGGAIKPPASSSVPSFVQGIALGMIETRGMVPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAVN
AAVRAGADACERVGDGLVAAHIIARPHQEVEPALRPTHAKRRS

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=85, Percent_Identity=54.1176470588235, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 20174; Mature: 20043

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPSSSSSSDSPSLTTAKPAGSEVAKKVLPAKATQTVDVSASTSSLSGSKSTTRRSAAT
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHC
GRTSASRATAATPASRGGKSAAGSSGSGSASGGAIKPPASSSVPSFVQGIALGMIETRGM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
VPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCHHHHHHHCCCHHH
AHIIARPHQEVEPALRPTHAKRRS
HHHHHCCHHHHCHHCCCCCCCCCC
>Mature Secondary Structure 
PKPSSSSSSDSPSLTTAKPAGSEVAKKVLPAKATQTVDVSASTSSLSGSKSTTRRSAAT
CCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHC
GRTSASRATAATPASRGGKSAAGSSGSGSASGGAIKPPASSSVPSFVQGIALGMIETRGM
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
VPAIEAADAMTKAAEVNLISREYVGGGYVTVMVRGETGAVNAAVRAGADACERVGDGLVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHCHHHHHHHCCCHHH
AHIIARPHQEVEPALRPTHAKRRS
HHHHHCCHHHHCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]