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The map label for this gene is cbbX [H]

Identifier: 33863467

GI number: 33863467

Start: 1286400

End: 1287317

Strand: Reverse

Name: cbbX [H]

Synonym: PMT1197

Alternate gene names: 33863467

Gene position: 1287317-1286400 (Counterclockwise)

Preceding gene: 33863468

Following gene: 33863463

Centisome position: 53.4

GC content: 47.49

Gene sequence:

>918_bases
ATGGACTCCTCAATTGATCTCTCTTTGGCTTATGCCGATTCCGGAGTTGGTGAGGTACTAGATCAGTTGGATTGTGAGCT
GATTGGCTTGAAGCCGGTGAAGACGAGGATTCGAGAAATTGCCGCTTTGTTGTTAGTTGATCGGGCCAGGAAAGATCTCG
ATCTTGCTAGCACGATGCCAAGCCTTCATATGTCTTTTACTGGACGACCTGGCACTGGAAAGACAACTGTTGCAATCAGA
ATTTCTCAGATTCTTCATCGCCTTGGATACCTGCGCAAAGGACATGTTGTAACTGTCACCCGTGACGACTTAGTTGGTCA
GTACGTTGGCCACACGGCACCAAAAACTCGGGAGATGATTAAACGTGCGCAGGGAGGTGTGTTGTTTATAGATGAGGCAT
ATTACCTTTATAAACCAGGTAATGAAAGAGATTATGGAGCAGAAGCAATCGAAATATTGCTACAGGATATGGAGAGCCGG
CGAGGTGATTTTGTTGTTATTTTTGCTGGTTATAAAGATAAGATGGATGCTTTCTATCAATCTAATCCGGGCCTTTCTTC
GAGGGTTGCTCACCATATTGATTTCCCGGATTACAGCAACCGGGAGTTGTTGGCTATCGCTCAGTTATTCCTGGTCCAGC
AGAACTATTACTTTGGCGATGAAGCTGAGGGCATTTTCGAGGATTACATCGAACGTCGCCGTCAGCTTCCTTTCTTTGCT
AATGCTCGCTCAATTCGCAATGCTCTGGACCGTACCCGTTTGAGGCAGGCGAACCGATTGTTTGCACGCATGGGAGAACC
GCTCAGTCGTGATGAACTGATGACGATCGAACCTGCTGATATCTTGGCGAGTCGTGTATTCCAAGGGGAGGTGGAAGGCC
GGCATCCGACTCAACCCCTGATGGAATCGTCTGAATGA

Upstream 100 bases:

>100_bases
AGTTTTGGACGTACCTATGTCAATATCACTTTGCGGCCGGAGGATGAAGAAGAAGAGGTTGAGTTAAATGATGATGATTA
CAAATTTGCAGCTGAGATAG

Downstream 100 bases:

>100_bases
GGATTGAAGATGGCTGTTTGGATGAAAACCTTTCTCTACTTTGGTTGTTCCAGATCCCGTCTGATCAGCACAAGCAAATA
AGACGGTGCCTTGTAACGGC

Product: RuBisCo-expression protein CbbX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDSSIDLSLAYADSGVGEVLDQLDCELIGLKPVKTRIREIAALLLVDRARKDLDLASTMPSLHMSFTGRPGTGKTTVAIR
ISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMIKRAQGGVLFIDEAYYLYKPGNERDYGAEAIEILLQDMESR
RGDFVVIFAGYKDKMDAFYQSNPGLSSRVAHHIDFPDYSNRELLAIAQLFLVQQNYYFGDEAEGIFEDYIERRRQLPFFA
NARSIRNALDRTRLRQANRLFARMGEPLSRDELMTIEPADILASRVFQGEVEGRHPTQPLMESSE

Sequences:

>Translated_305_residues
MDSSIDLSLAYADSGVGEVLDQLDCELIGLKPVKTRIREIAALLLVDRARKDLDLASTMPSLHMSFTGRPGTGKTTVAIR
ISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMIKRAQGGVLFIDEAYYLYKPGNERDYGAEAIEILLQDMESR
RGDFVVIFAGYKDKMDAFYQSNPGLSSRVAHHIDFPDYSNRELLAIAQLFLVQQNYYFGDEAEGIFEDYIERRRQLPFFA
NARSIRNALDRTRLRQANRLFARMGEPLSRDELMTIEPADILASRVFQGEVEGRHPTQPLMESSE
>Mature_305_residues
MDSSIDLSLAYADSGVGEVLDQLDCELIGLKPVKTRIREIAALLLVDRARKDLDLASTMPSLHMSFTGRPGTGKTTVAIR
ISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMIKRAQGGVLFIDEAYYLYKPGNERDYGAEAIEILLQDMESR
RGDFVVIFAGYKDKMDAFYQSNPGLSSRVAHHIDFPDYSNRELLAIAQLFLVQQNYYFGDEAEGIFEDYIERRRQLPFFA
NARSIRNALDRTRLRQANRLFARMGEPLSRDELMTIEPADILASRVFQGEVEGRHPTQPLMESSE

Specific function: Seems to be necessary for the expression of RuBisCO [H]

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cbxX/cfxQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR000641
- InterPro:   IPR000470 [H]

Pfam domain/function: PF00004 AAA [H]

EC number: NA

Molecular weight: Translated: 34580; Mature: 34580

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSSIDLSLAYADSGVGEVLDQLDCELIGLKPVKTRIREIAALLLVDRARKDLDLASTMP
CCCCEEEEEEECCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLHMSFTGRPGTGKTTVAIRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMI
CCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHH
KRAQGGVLFIDEAYYLYKPGNERDYGAEAIEILLQDMESRRGDFVVIFAGYKDKMDAFYQ
HHHCCCEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHC
SNPGLSSRVAHHIDFPDYSNRELLAIAQLFLVQQNYYFGDEAEGIFEDYIERRRQLPFFA
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
NARSIRNALDRTRLRQANRLFARMGEPLSRDELMTIEPADILASRVFQGEVEGRHPTQPL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
MESSE
CCCCC
>Mature Secondary Structure
MDSSIDLSLAYADSGVGEVLDQLDCELIGLKPVKTRIREIAALLLVDRARKDLDLASTMP
CCCCEEEEEEECCCCHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLHMSFTGRPGTGKTTVAIRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMI
CCEEEECCCCCCCCEEEEEEHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHHH
KRAQGGVLFIDEAYYLYKPGNERDYGAEAIEILLQDMESRRGDFVVIFAGYKDKMDAFYQ
HHHCCCEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHC
SNPGLSSRVAHHIDFPDYSNRELLAIAQLFLVQQNYYFGDEAEGIFEDYIERRRQLPFFA
CCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
NARSIRNALDRTRLRQANRLFARMGEPLSRDELMTIEPADILASRVFQGEVEGRHPTQPL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
MESSE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9006018 [H]