Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863367

Identifier: 33863367

GI number: 33863367

Start: 1187433

End: 1187705

Strand: Reverse

Name: 33863367

Synonym: PMT1096

Alternate gene names: NA

Gene position: 1187705-1187433 (Counterclockwise)

Preceding gene: 33863369

Following gene: 33863362

Centisome position: 49.26

GC content: 49.08

Gene sequence:

>273_bases
ATGACATCTCTTGATCACCCTGAGGCGATTAGACACTTCCAGTCGCTTTGTGATGCCTGTCAGGAACTGACCAGTCGTTA
CCACAGTCAGTCGGAGCTTCGGCTCTATGCAGACGGCTACATTCATGCTCTAAGGCGTAGTGGACAACTGGAGATAAGGG
ATCAGGCCAGGTTTGAAGATCTTGTCGATCGTTGGATTTTGGATCCCTCCAGCTTTATTGGCCCAGATGGCGATATGGGA
ACTCTTTATCGCAAAAAAGAAGCGGGTTGGTAA

Upstream 100 bases:

>100_bases
AGATTGCGGGGAATGGAGGTCACATGTGATCACAGATCGCGCTTACGCTAAACCCAATCCAATGGCAAGCTGCCAAAAGA
GGCTGCCGTGATCTCCGACC

Downstream 100 bases:

>100_bases
TTCCTTTTTGGAATTCCAGCAGCCTTTGCAGACCAGCTGGCCAGGGCAAGCTCCCTGTTTACATCCCAGGGATTGGGTAG
CTGCCTTTTGTTTTCGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTSLDHPEAIRHFQSLCDACQELTSRYHSQSELRLYADGYIHALRRSGQLEIRDQARFEDLVDRWILDPSSFIGPDGDMG
TLYRKKEAGW

Sequences:

>Translated_90_residues
MTSLDHPEAIRHFQSLCDACQELTSRYHSQSELRLYADGYIHALRRSGQLEIRDQARFEDLVDRWILDPSSFIGPDGDMG
TLYRKKEAGW
>Mature_89_residues
TSLDHPEAIRHFQSLCDACQELTSRYHSQSELRLYADGYIHALRRSGQLEIRDQARFEDLVDRWILDPSSFIGPDGDMGT
LYRKKEAGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10472; Mature: 10341

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLDHPEAIRHFQSLCDACQELTSRYHSQSELRLYADGYIHALRRSGQLEIRDQARFED
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEHHHHHHHH
LVDRWILDPSSFIGPDGDMGTLYRKKEAGW
HHHHHHCCCHHHCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure 
TSLDHPEAIRHFQSLCDACQELTSRYHSQSELRLYADGYIHALRRSGQLEIRDQARFED
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCEEHHHHHHHH
LVDRWILDPSSFIGPDGDMGTLYRKKEAGW
HHHHHHCCCHHHCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA