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The map label for this gene is cad [H]

Identifier: 33863337

GI number: 33863337

Start: 1150026

End: 1151426

Strand: Reverse

Name: cad [H]

Synonym: PMT1066

Alternate gene names: 33863337

Gene position: 1151426-1150026 (Counterclockwise)

Preceding gene: 33863339

Following gene: 33863336

Centisome position: 47.76

GC content: 56.46

Gene sequence:

>1401_bases
ATGGGCTTTCTTCCCCTGTTGACTCGCGACCGTGGTCGCAGGTTGCATCTTCCCGCTCATGGTCGTGGGGCTGGCTTGCC
TGATGATCTGCGTGCAATGTTGCGCCATCGAGCTGGCATCTGGGATCTGCCGGAACTTCCTGAGTTGGGTGGGCCATTGA
TGCAGCAGGGGGCGGTGGCAGAGAGTCAAAGGCAGGCAGCGATTGCTATCGGGGCTGAGCGGGGTTGGTATGGCGTCAAT
GGCGCGACAGGCCTCTTGCAGGCTGCTCTCTTGGCAATAGCAAGGCCTGGTCAGGCTGTGTTGATGCCTCGCAATGTCCA
TCGCAGTCTCATTCAGGCTTGTGTTTTGGGCGATCTCACGCCTGTCTTGTTTGACCTGCCTTTCATGGTTGATCGGGGTC
ATGTGCTTCCCCCTGATGGACCTTGGTTGAAGGACGTTTTGAATGAACTTCCTATCGCTGGTGTTGAGATCGCTGCAGCT
GTGTTGGTGCATCCCACTTATCAGGGCTATGCGACAGATCTCAAGCCCATGGTTGTTGAGCTTCATTCTCGGGGTTGGCC
GGTATTAGTGGATGAGGCTCATGGTGCTCATTTCGCCAGTCGGGTGGATGCATCTTTACCTGATTCTGCGATCACAGCAG
GTGCTGACTTAATCGTTCACTCATTGCACAAATCTGCTGCCGGTTTGACTCAGACGGCAGTGCTTTGGAGTCAAGGGGAT
CGCGTTGATCCCAAAGCTGTCGAGCGCAGTCTCGGCTGGTTGCAAACTACCAGTCCAAGCGCACTCTTGCTGGCTTCTTG
TGAAGCGTCGCTGAGTGACTTGTGCAAGCCTGCAGGCTTGCACAAGCTGGGAACGCGCCTCAAGGATGCTCGCGAATTGG
CGGTTCAACTTCGTCAGTTGGGATTGCCTTTGCTTGAAAACCAGGATCCCTTGCGGCTGATTTTGCACACCGCTGCAGAG
GGTATCAGCGGACTTGAAGCAGATGCTTGGCTGATGGCCAGGGGGCTGGTGGGCGAACTTCCAGAACCAGGCTGCCTAAC
GTTCTGTCTTGGCTTGGCGCCTCAGCGTGGATTGGTCAGGTTGATGCATCGTCGCTGGCGGGGACTCCTTGCGGCCCAAG
GTAAGGGCCTACCTTTGCCAGTCTTTACGCCCCCGCCACTGCCGCGCATCACAGCACCAGCAATGGCTTGTGGCTTGGCT
TGGCGCGCTCAAAGTCGGAGAGTGTCGATTGCTGATGCGGTAGGGAGAGTCGCGGCGGAGTTAATCTGTCCCTATCCTCC
AGGGATTCCCTTGCTAGTGCCGGGTGAGAAGCTGGATCACAGACGTGTGGACTGGCTTTTAGAGCAGCAGAACCTTTGGC
CCGATCAGATCGCTGGTACGGTAAAAGTTATGGCCTTGTAA

Upstream 100 bases:

>100_bases
GGTGCTTTGCGGGATGCTGAAGCGGACGATGGATTGGAGCTGTTCAACAGACCGCCCGGGCACGTTGATCATCAGACTTT
AGAAACGGCGATTCACCTTC

Downstream 100 bases:

>100_bases
GACCATCAATGGTGTGGGCGTGATAGCAGAGGCCTTTCGATGGAGATTGGTTGCAGCCGGATCTTCCAGCCAGCGGATTA
TCAGTGGCCTGGCTGCTGGA

Product: Orn/Lys/Arg decarboxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MGFLPLLTRDRGRRLHLPAHGRGAGLPDDLRAMLRHRAGIWDLPELPELGGPLMQQGAVAESQRQAAIAIGAERGWYGVN
GATGLLQAALLAIARPGQAVLMPRNVHRSLIQACVLGDLTPVLFDLPFMVDRGHVLPPDGPWLKDVLNELPIAGVEIAAA
VLVHPTYQGYATDLKPMVVELHSRGWPVLVDEAHGAHFASRVDASLPDSAITAGADLIVHSLHKSAAGLTQTAVLWSQGD
RVDPKAVERSLGWLQTTSPSALLLASCEASLSDLCKPAGLHKLGTRLKDARELAVQLRQLGLPLLENQDPLRLILHTAAE
GISGLEADAWLMARGLVGELPEPGCLTFCLGLAPQRGLVRLMHRRWRGLLAAQGKGLPLPVFTPPPLPRITAPAMACGLA
WRAQSRRVSIADAVGRVAAELICPYPPGIPLLVPGEKLDHRRVDWLLEQQNLWPDQIAGTVKVMAL

Sequences:

>Translated_466_residues
MGFLPLLTRDRGRRLHLPAHGRGAGLPDDLRAMLRHRAGIWDLPELPELGGPLMQQGAVAESQRQAAIAIGAERGWYGVN
GATGLLQAALLAIARPGQAVLMPRNVHRSLIQACVLGDLTPVLFDLPFMVDRGHVLPPDGPWLKDVLNELPIAGVEIAAA
VLVHPTYQGYATDLKPMVVELHSRGWPVLVDEAHGAHFASRVDASLPDSAITAGADLIVHSLHKSAAGLTQTAVLWSQGD
RVDPKAVERSLGWLQTTSPSALLLASCEASLSDLCKPAGLHKLGTRLKDARELAVQLRQLGLPLLENQDPLRLILHTAAE
GISGLEADAWLMARGLVGELPEPGCLTFCLGLAPQRGLVRLMHRRWRGLLAAQGKGLPLPVFTPPPLPRITAPAMACGLA
WRAQSRRVSIADAVGRVAAELICPYPPGIPLLVPGEKLDHRRVDWLLEQQNLWPDQIAGTVKVMAL
>Mature_465_residues
GFLPLLTRDRGRRLHLPAHGRGAGLPDDLRAMLRHRAGIWDLPELPELGGPLMQQGAVAESQRQAAIAIGAERGWYGVNG
ATGLLQAALLAIARPGQAVLMPRNVHRSLIQACVLGDLTPVLFDLPFMVDRGHVLPPDGPWLKDVLNELPIAGVEIAAAV
LVHPTYQGYATDLKPMVVELHSRGWPVLVDEAHGAHFASRVDASLPDSAITAGADLIVHSLHKSAAGLTQTAVLWSQGDR
VDPKAVERSLGWLQTTSPSALLLASCEASLSDLCKPAGLHKLGTRLKDARELAVQLRQLGLPLLENQDPLRLILHTAAEG
ISGLEADAWLMARGLVGELPEPGCLTFCLGLAPQRGLVRLMHRRWRGLLAAQGKGLPLPVFTPPPLPRITAPAMACGLAW
RAQSRRVSIADAVGRVAAELICPYPPGIPLLVPGEKLDHRRVDWLLEQQNLWPDQIAGTVKVMAL

Specific function: Catalyzes the formation of agmatine from arginine [H]

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: =4.1.1.19 [H]

Molecular weight: Translated: 50092; Mature: 49961

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: PS00703 OKR_DC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLPLLTRDRGRRLHLPAHGRGAGLPDDLRAMLRHRAGIWDLPELPELGGPLMQQGAVA
CCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHH
ESQRQAAIAIGAERGWYGVNGATGLLQAALLAIARPGQAVLMPRNVHRSLIQACVLGDLT
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCC
PVLFDLPFMVDRGHVLPPDGPWLKDVLNELPIAGVEIAAAVLVHPTYQGYATDLKPMVVE
HHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHH
LHSRGWPVLVDEAHGAHFASRVDASLPDSAITAGADLIVHSLHKSAAGLTQTAVLWSQGD
HHCCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCC
RVDPKAVERSLGWLQTTSPSALLLASCEASLSDLCKPAGLHKLGTRLKDARELAVQLRQL
CCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GLPLLENQDPLRLILHTAAEGISGLEADAWLMARGLVGELPEPGCLTFCLGLAPQRGLVR
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
LMHRRWRGLLAAQGKGLPLPVFTPPPLPRITAPAMACGLAWRAQSRRVSIADAVGRVAAE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
LICPYPPGIPLLVPGEKLDHRRVDWLLEQQNLWPDQIAGTVKVMAL
HCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEC
>Mature Secondary Structure 
GFLPLLTRDRGRRLHLPAHGRGAGLPDDLRAMLRHRAGIWDLPELPELGGPLMQQGAVA
CCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHH
ESQRQAAIAIGAERGWYGVNGATGLLQAALLAIARPGQAVLMPRNVHRSLIQACVLGDLT
HHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCC
PVLFDLPFMVDRGHVLPPDGPWLKDVLNELPIAGVEIAAAVLVHPTYQGYATDLKPMVVE
HHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHH
LHSRGWPVLVDEAHGAHFASRVDASLPDSAITAGADLIVHSLHKSAAGLTQTAVLWSQGD
HHCCCCCEEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHEECCCC
RVDPKAVERSLGWLQTTSPSALLLASCEASLSDLCKPAGLHKLGTRLKDARELAVQLRQL
CCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GLPLLENQDPLRLILHTAAEGISGLEADAWLMARGLVGELPEPGCLTFCLGLAPQRGLVR
CCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH
LMHRRWRGLLAAQGKGLPLPVFTPPPLPRITAPAMACGLAWRAQSRRVSIADAVGRVAAE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHH
LICPYPPGIPLLVPGEKLDHRRVDWLLEQQNLWPDQIAGTVKVMAL
HCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]