| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ybbP [H]
Identifier: 33863329
GI number: 33863329
Start: 1140766
End: 1141647
Strand: Reverse
Name: ybbP [H]
Synonym: PMT1058
Alternate gene names: 33863329
Gene position: 1141647-1140766 (Counterclockwise)
Preceding gene: 33863330
Following gene: 33863328
Centisome position: 47.35
GC content: 52.83
Gene sequence:
>882_bases GTGAACTTGTGGGGGGTGGTAGATCCGCGCCTGCTCGATGTTTTGTTTGCTTCGGCCCTTGGCGTCTTGCTTTTTTCTAG GGTCAATGAGCGGCGCACCCTGTGGTTGTTGAGGGGCTACCTCTTTTTGGTTGCCTTGGCTTGGTTTGTGCAACGCTTTG AAAATCTTCCGCTCACTTCAAAGTTGGTGGATGCGCTGGTTTTGGCTTGTTCTTTGTCATTAGCGATCCTTTGGCAGGGG GAACTGAGACGTTTGATGGAATTATTGGGAACAGGTCGCCTGGCCGTTCTCCTTGGCAATCCTCAGAACGAGTTACGGGC CACCGCCAGCACCGTTGCCCAGCTTACCGAGGCGGCTGGACGTTTATCTCAGAGCCGCCGTGGAGCATTGGTTGTTGTTG ATATGGGTAGTGATCTTCGTCCAGAAGACTTCCTTAACCCTGGTGTGCTGATCGATGCCCAGCTAAGTAGTGAGTTGCTG CTGAATCTTTTTGCATCTGATACGCCTCTCCATGACGGGGCCGTACTTGTAAAGGGGAATCGGATCGTTTCTGCTGGTGT GATTCTGCCCCTCTCGCGGCAGGGCATCAGCCGTTATGGCACGAGACATTTAGCAGCTTTGGGGATAACAGAACGTTTTG ATCGCTGTATTTGTGTGGTGGTTTCCGAAGAGACTGGAACATTGTCTCTTGCAAGCCAGGGCCGGCTTGAACGGCCCATC ACCAGTAGTCGTCTGCAGGATTTGCTTAAGGAGTTGCTTGGTTCCTCATTAGGAGCAGCAGCTACGAAGGGGGCCTCTAG TCCAGTCAAAGCTTCGGCTGTTGCTACACAAGCTTCATCCAGGCTTAGCGTGAGCAGCTCTATCGAGGAACCACTCCCTT GA
Upstream 100 bases:
>100_bases TGGTGCAGAGGCGGGAGCAGCCAGAAGATCTTCTGCGATATGACGTTATGCCGGAACGATTTTTAGCGTTAGGCTGAGCA AGCAAGGCTGGGGAGTGGGA
Downstream 100 bases:
>100_bases GCCGCCGTTCGGCCACTAGTTCAGGCCATCCAAAGGTCTGTGCATGTCCCTCGGGGCTTGATCCCTATCGGCTACCTAAC CATGTGGCTGTGATTATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP
Sequences:
>Translated_293_residues MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP >Mature_293_residues MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 31477; Mature: 31477
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KLVDALVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAG HHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH RLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELLLNLFASDTPLHDGAVLVKGN HHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECC RIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCC TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP HHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTS CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KLVDALVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAG HHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH RLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELLLNLFASDTPLHDGAVLVKGN HHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECC RIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCC TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP HHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]