Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is ybbP [H]

Identifier: 33863329

GI number: 33863329

Start: 1140766

End: 1141647

Strand: Reverse

Name: ybbP [H]

Synonym: PMT1058

Alternate gene names: 33863329

Gene position: 1141647-1140766 (Counterclockwise)

Preceding gene: 33863330

Following gene: 33863328

Centisome position: 47.35

GC content: 52.83

Gene sequence:

>882_bases
GTGAACTTGTGGGGGGTGGTAGATCCGCGCCTGCTCGATGTTTTGTTTGCTTCGGCCCTTGGCGTCTTGCTTTTTTCTAG
GGTCAATGAGCGGCGCACCCTGTGGTTGTTGAGGGGCTACCTCTTTTTGGTTGCCTTGGCTTGGTTTGTGCAACGCTTTG
AAAATCTTCCGCTCACTTCAAAGTTGGTGGATGCGCTGGTTTTGGCTTGTTCTTTGTCATTAGCGATCCTTTGGCAGGGG
GAACTGAGACGTTTGATGGAATTATTGGGAACAGGTCGCCTGGCCGTTCTCCTTGGCAATCCTCAGAACGAGTTACGGGC
CACCGCCAGCACCGTTGCCCAGCTTACCGAGGCGGCTGGACGTTTATCTCAGAGCCGCCGTGGAGCATTGGTTGTTGTTG
ATATGGGTAGTGATCTTCGTCCAGAAGACTTCCTTAACCCTGGTGTGCTGATCGATGCCCAGCTAAGTAGTGAGTTGCTG
CTGAATCTTTTTGCATCTGATACGCCTCTCCATGACGGGGCCGTACTTGTAAAGGGGAATCGGATCGTTTCTGCTGGTGT
GATTCTGCCCCTCTCGCGGCAGGGCATCAGCCGTTATGGCACGAGACATTTAGCAGCTTTGGGGATAACAGAACGTTTTG
ATCGCTGTATTTGTGTGGTGGTTTCCGAAGAGACTGGAACATTGTCTCTTGCAAGCCAGGGCCGGCTTGAACGGCCCATC
ACCAGTAGTCGTCTGCAGGATTTGCTTAAGGAGTTGCTTGGTTCCTCATTAGGAGCAGCAGCTACGAAGGGGGCCTCTAG
TCCAGTCAAAGCTTCGGCTGTTGCTACACAAGCTTCATCCAGGCTTAGCGTGAGCAGCTCTATCGAGGAACCACTCCCTT
GA

Upstream 100 bases:

>100_bases
TGGTGCAGAGGCGGGAGCAGCCAGAAGATCTTCTGCGATATGACGTTATGCCGGAACGATTTTTAGCGTTAGGCTGAGCA
AGCAAGGCTGGGGAGTGGGA

Downstream 100 bases:

>100_bases
GCCGCCGTTCGGCCACTAGTTCAGGCCATCCAAAGGTCTGTGCATGTCCCTCGGGGCTTGATCCCTATCGGCTACCTAAC
CATGTGGCTGTGATTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG
ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL
LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI
TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP

Sequences:

>Translated_293_residues
MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG
ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL
LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI
TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP
>Mature_293_residues
MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTSKLVDALVLACSLSLAILWQG
ELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAGRLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELL
LNLFASDTPLHDGAVLVKGNRIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI
TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 31477; Mature: 31477

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLVDALVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAG
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELLLNLFASDTPLHDGAVLVKGN
HHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECC
RIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI
EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCC
TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP
HHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure
MNLWGVVDPRLLDVLFASALGVLLFSRVNERRTLWLLRGYLFLVALAWFVQRFENLPLTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLVDALVLACSLSLAILWQGELRRLMELLGTGRLAVLLGNPQNELRATASTVAQLTEAAG
HHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RLSQSRRGALVVVDMGSDLRPEDFLNPGVLIDAQLSSELLLNLFASDTPLHDGAVLVKGN
HHHHCCCCEEEEEECCCCCCCHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECC
RIVSAGVILPLSRQGISRYGTRHLAALGITERFDRCICVVVSEETGTLSLASQGRLERPI
EEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCC
TSSRLQDLLKELLGSSLGAAATKGASSPVKASAVATQASSRLSVSSSIEEPLP
HHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]