Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33863304

Identifier: 33863304

GI number: 33863304

Start: 1111168

End: 1111533

Strand: Reverse

Name: 33863304

Synonym: PMT1033

Alternate gene names: NA

Gene position: 1111533-1111168 (Counterclockwise)

Preceding gene: 33863307

Following gene: 33863300

Centisome position: 46.11

GC content: 47.81

Gene sequence:

>366_bases
TTGTCTGATGTCTTGATTGGAGCAATGAGTGATAGTTGGCATCCACCGATGAGCGTTCAAAAACCTCTTTCAGACAACGT
CTCTGCATCGATGCAAGAGCCCGACCGTAAAGATCAGAACCTCAATCCGATTGAAGGGCTTGGATCTCACTCTTATGTGG
TTTTGGCTACTTTATGTACTGTTAGCTTGATCGTGATTGCCTGGTCTCTTGTTCCAATCTCTAGGCAGGCAACACGCTGG
AACGGATGTTTTCAGGAGTCTTTTCGTTGGGACCGCAGAACGTTCCCAAAGGATCCACAGTTGGTTTCGAAGTTGTGGGC
GACTCGCTACTGCAATGGTGGATCACTATCAATGCCTAGGGAGTAG

Upstream 100 bases:

>100_bases
GGAATCAGACTGTATGCTAGACGTTTCATTGAAAAGCAATCATTTAATAGAAACCTACAGGTTTTAGGCTTTTGTCAGGC
CGTATTTTAAGAACACAACT

Downstream 100 bases:

>100_bases
TCGCTGCTGACTTTGATGCAGAGTCACCATGGTTGCACTCAGCCTCGATTTCTTTTGAGGTGCTCTCATGGATCAAATTA
ACTGCGGATGAGCAGGATCA

Product: Ets-domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSDVLIGAMSDSWHPPMSVQKPLSDNVSASMQEPDRKDQNLNPIEGLGSHSYVVLATLCTVSLIVIAWSLVPISRQATRW
NGCFQESFRWDRRTFPKDPQLVSKLWATRYCNGGSLSMPRE

Sequences:

>Translated_121_residues
MSDVLIGAMSDSWHPPMSVQKPLSDNVSASMQEPDRKDQNLNPIEGLGSHSYVVLATLCTVSLIVIAWSLVPISRQATRW
NGCFQESFRWDRRTFPKDPQLVSKLWATRYCNGGSLSMPRE
>Mature_120_residues
SDVLIGAMSDSWHPPMSVQKPLSDNVSASMQEPDRKDQNLNPIEGLGSHSYVVLATLCTVSLIVIAWSLVPISRQATRWN
GCFQESFRWDRRTFPKDPQLVSKLWATRYCNGGSLSMPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13625; Mature: 13493

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVLIGAMSDSWHPPMSVQKPLSDNVSASMQEPDRKDQNLNPIEGLGSHSYVVLATLCT
CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSLIVIAWSLVPISRQATRWNGCFQESFRWDRRTFPKDPQLVSKLWATRYCNGGSLSMPR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
E
C
>Mature Secondary Structure 
SDVLIGAMSDSWHPPMSVQKPLSDNVSASMQEPDRKDQNLNPIEGLGSHSYVVLATLCT
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VSLIVIAWSLVPISRQATRWNGCFQESFRWDRRTFPKDPQLVSKLWATRYCNGGSLSMPR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA