| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863055
Identifier: 33863055
GI number: 33863055
Start: 858326
End: 859003
Strand: Direct
Name: 33863055
Synonym: PMT0783
Alternate gene names: NA
Gene position: 858326-859003 (Clockwise)
Preceding gene: 33863054
Following gene: 33863056
Centisome position: 35.6
GC content: 54.13
Gene sequence:
>678_bases ATGGCCAATACATACAAGAGACTCGTTGTCATAGGTGACAGTGGTGTTTATGGATGGGGAGATCGAGAGGGTGGCGGATG GTGTGAACGTCTGCGATGCCAATGGATGAGCCTCCCTGATGCCCCAGTGGTCTACCAGCTTGGAATTCGTGGTGATGGAC TGGAAAGTGTTGCCAAACGCTGGCAAAAGGAATGGCAAAGTCGAGGCGAACTCCGTCGTCAGGTTCCTGATGCAGTTCTT GTGGCGGTGGGCCTCAATGACACAGCACGTATTGGACGCCCCGATGGCCGGCCCCAACTCACGGCAGAGGCCTTTCGCTT TGGCCTGCAGCAAATGCTGACAGAGATGAAACACCTCACCAAGGTGATGGTGATGGGCCTCACTCCTGTCGATGAAGCTG TAATGCCATTTGCGCAATGCCTCTGGTATTCAAACCAATCGGGGTCGGTTTATGAAGCCCAGCTTGAGGAAGCCTGTCTT GAGGTTGATGTGCCATTTCTGCCGTTGCACAACGCCATGCTCAATGAACCTGCCTGGCTCAGCTGGATCGAACCCGATGG TATCCATCTCAACTCAGAGGGACATGACTGGATCCACCAACGGGTGATGGCATGGACATCGATGCTGGAGTGGGCAGAGC TCGAACCACTAACAAACTTCACTCCTACGGTTGGCTGA
Upstream 100 bases:
>100_bases TCGATCACTGATCGCTTGCGATATCACTGGACTGGTTCAACTAAAAAGCTACCTATGGTTGTAGACCTACAAAGCTGATC AGGTTCCACTTCTCGATGTG
Downstream 100 bases:
>100_bases AATCACCCCTAAGGAATCCGATGTTCATCCTTTAGTTGGTTTACCAGTGCTGCAGAAAAGAAGAAAGTTAAGGATGTCAA TAGAAAGTCAAGTCATGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: G-D-S-L Family Lipolytic Protein; Lipolytic Protein G-D-S-L Family; Lysophospholipase L1 And Related Esterase; Lysophospholipase L1 And Related Esterases; GDSL Family Lipase; Lipolytic G-D-S-L; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein; Lysophospholipase; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; SGNH Hydrolases Subfamily Lipase/Esterase
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MANTYKRLVVIGDSGVYGWGDREGGGWCERLRCQWMSLPDAPVVYQLGIRGDGLESVAKRWQKEWQSRGELRRQVPDAVL VAVGLNDTARIGRPDGRPQLTAEAFRFGLQQMLTEMKHLTKVMVMGLTPVDEAVMPFAQCLWYSNQSGSVYEAQLEEACL EVDVPFLPLHNAMLNEPAWLSWIEPDGIHLNSEGHDWIHQRVMAWTSMLEWAELEPLTNFTPTVG
Sequences:
>Translated_225_residues MANTYKRLVVIGDSGVYGWGDREGGGWCERLRCQWMSLPDAPVVYQLGIRGDGLESVAKRWQKEWQSRGELRRQVPDAVL VAVGLNDTARIGRPDGRPQLTAEAFRFGLQQMLTEMKHLTKVMVMGLTPVDEAVMPFAQCLWYSNQSGSVYEAQLEEACL EVDVPFLPLHNAMLNEPAWLSWIEPDGIHLNSEGHDWIHQRVMAWTSMLEWAELEPLTNFTPTVG >Mature_224_residues ANTYKRLVVIGDSGVYGWGDREGGGWCERLRCQWMSLPDAPVVYQLGIRGDGLESVAKRWQKEWQSRGELRRQVPDAVLV AVGLNDTARIGRPDGRPQLTAEAFRFGLQQMLTEMKHLTKVMVMGLTPVDEAVMPFAQCLWYSNQSGSVYEAQLEEACLE VDVPFLPLHNAMLNEPAWLSWIEPDGIHLNSEGHDWIHQRVMAWTSMLEWAELEPLTNFTPTVG
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25483; Mature: 25352
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTYKRLVVIGDSGVYGWGDREGGGWCERLRCQWMSLPDAPVVYQLGIRGDGLESVAKR CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH WQKEWQSRGELRRQVPDAVLVAVGLNDTARIGRPDGRPQLTAEAFRFGLQQMLTEMKHLT HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KVMVMGLTPVDEAVMPFAQCLWYSNQSGSVYEAQLEEACLEVDVPFLPLHNAMLNEPAWL HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCEE SWIEPDGIHLNSEGHDWIHQRVMAWTSMLEWAELEPLTNFTPTVG EEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ANTYKRLVVIGDSGVYGWGDREGGGWCERLRCQWMSLPDAPVVYQLGIRGDGLESVAKR CCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH WQKEWQSRGELRRQVPDAVLVAVGLNDTARIGRPDGRPQLTAEAFRFGLQQMLTEMKHLT HHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KVMVMGLTPVDEAVMPFAQCLWYSNQSGSVYEAQLEEACLEVDVPFLPLHNAMLNEPAWL HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCEE SWIEPDGIHLNSEGHDWIHQRVMAWTSMLEWAELEPLTNFTPTVG EEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA