| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is zam [H]
Identifier: 33863038
GI number: 33863038
Start: 835005
End: 837398
Strand: Direct
Name: zam [H]
Synonym: PMT0766
Alternate gene names: 33863038
Gene position: 835005-837398 (Clockwise)
Preceding gene: 33863037
Following gene: 33863039
Centisome position: 34.63
GC content: 48.33
Gene sequence:
>2394_bases ATGAAGTTCACGGTCGCTGACCTGCTTGACCAGTTACCCCCCACTGGGGGACTGGAGATCAAAAAACTCGAAAAAATTCT CAAGCTCACCACAAAGGCCGATCGCGACGGTCTTGAAACAGCCCTTCAGGCTCTCTTGAAGCTCGGCATTGTCAACAACG AAGAAGCCGGTGCAATAAAGCGTAGTGATGACGAGTCACTGATTGAAGCTCGTTTGCGCTGCAGCAGTAAAGGATTTTGC TTTGCCCTAAGAGATGATGGGGGAGACGATATCTATATTCGCGATCATCAGCTCAACCATGCCTGGAACGGAGATCGGGT ACTAGTCCGCATCACAAGAGATGGGGGACGTCGAAGATCGCCAGAAGGTGGTGTGCAATGCATCCTCGAAAGGAGCACCA CCAGCTTGCTTGGTCATGTTGAACGCAAAGATCAAAATATCCTTGCAATACCTCTTGATGACCGCATCCTTGCAACGATC CAACTGCCAGATGGTGATCAAGCCCATCTGAATGATGGGGAGCAGACAAGCGTGGTGGAGGTGAAGCTTGATCGCTATCC CATTGCCCAGTTCCCCGCTGAAGGGCATGTAGCACGGTCACTTCCCTTGAATGGAGGCCCCTCAAGTGATCGTGATCTTC TTCTTACCAAAGCCAACCTTCAAGATCGACCTGCTCCACCACGCAGCAGCCTAAAGACCCCAACGGCTAAACATCGGCAA GATCTGAGCTCGCAACCAGCGTTGCTACTGCGTAGCTGGCAGGTATCTGATGCGCCACCCCTACCAGCGGTGTATGTGGA GCCCCATGCAGGTGGCACACGTCTGTGGATTCATGCGCCTGCTGTAGCAGAACGTCTTACTATTGGGAACAACCTGGATC TCTGGCTAAGAGATCGAGCGGAAGCTCTCTGCCTTGGAGAAGTTTGGCATCCCCTACTCGGCCAAATTCTTTCAAAAGCC TGTTCATTTAAAGTTGGGGAAATCAACGATGCAGTAAGCGTTGCTCTCGACATCTCGGCAGATGGTGAGGTAACTAATTG GCATTTCAGCCTTAGTTCAATCAAGCCAGTAGCCGAAATCGGACCTAAGACCCTCACAGCTCTTAGCAACAGAAAACCAA AGGCAAGAACAGTCCCTGCTGCTCTGAAGCCCGTTAAGGATCACTTAGCCCAACTCGAGACATTAATCTTTTGTGCTCGT ACATTGCAAATGGGAGAACAGGCCAGTGGCTCTATAGAGCTTGATCTGGCTGTTCCAGAACTTCAATGTCTTGGCGACCT CCGCTGGGCAGACCCTGATTCATATCATCATCAATGGGCTCTTCCTCTTGATCAAACTGACCCCCAATCAGTTTTGAGCC CAATGATTAGAGCTGCTCATCGTGCCTGGGCGCAACATGCCCAGAACTTGCAACTCCCTGGCCTGGTGATTGAGGCTTCA GAAGCAGACAACAACACCTTGAACGACGTTGCTAAATCAGCATTAGCTCTTGATATTGCCTTGGAACTTGATGAAGAAGG TAGACCTGCTGCCACAGAGCTTGCAAAAGCATTTTCGACAACAGCCTGTCGAAGAGTGCTGGATCAGCAACTACGCCATG CACTGCCAGAAACTTTGTTAAGACTGGGAATTAATGATAGTCAGAAAGAGAATGGAAACATTGAATCCGACCATGAAGAC ACAAAGACAAAGGATTCGAACCTACAATCACCTTGGTGCTGTCCAACTATCCATTACACCGATCTTGTTAATCAAGAGAT CATAGTGACACTTTTAAGTAACGGTAAAGATCGTCCAAATGTCCGACAAAAGGAAAAAGTGGTTCTGGGGTCCCGTGAAT GCTGGCAACAAATCAAGTGGCCACTATTCAGCACAAGCCAAGCAAAGAACCTAGAAGAAATTTGCAGTAAAAGCCTCGTG CATCGCCTCAACACACTGCGCCGTCAAGCTGAAGAGCTTCGACAAGACCTGATCGCTATGGTTCAGGCACGTATCGTGGA ACCCCTTGTTGGGGAAGAGCATCAGGGGGTGATAAGCGGAGTGCAGAGTTATGGGTTCTTTGTGGAAATTCCACCTTCTA TGGCAGAGGGCCTTGTCCACGTCAGCTCTTTAAATGACGATTGGTACGAATATCGCTCACGTCAAAACCGATTGGTGGGT CGGAAGAATCGCAAGATCTATCAACTTGGTGATCAAGTAAACGTTAAGGTTGTTAAAGTAGACGCCTTAAGAAACCAAAT TGACCTCGAAGTCAATGGATCAGCAATAACTGTTGAAGCCAATATGAATGTTAATTCTGATCCAACCAATCAAGCAACAA CAACAAAAAAAAGTGAGGTCAAAGGCAAAATCACCAAGAATAATGAACAACTAGTCAGCTCAAGTGAGGCATAG
Upstream 100 bases:
>100_bases AATTAACTCACAGCCAATGTTGACTCTGCGCTGTCTTCGGATTCCTCTTTGGTGATGGCACCGCCGGTCATGAAGACTGG TCTTCTACCTTCCTATCTCA
Downstream 100 bases:
>100_bases TTTGTGGATCCCTATGTCCTTGCCGTATCTGGAGCATCAGCTCAACCTCTAGCTGAAAGATCGCTGCAGCTCTTGCTTGA AAACAACCGTGACGTCCATT
Product: acetazolamide conferring resistance protein Zam
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MKFTVADLLDQLPPTGGLEIKKLEKILKLTTKADRDGLETALQALLKLGIVNNEEAGAIKRSDDESLIEARLRCSSKGFC FALRDDGGDDIYIRDHQLNHAWNGDRVLVRITRDGGRRRSPEGGVQCILERSTTSLLGHVERKDQNILAIPLDDRILATI QLPDGDQAHLNDGEQTSVVEVKLDRYPIAQFPAEGHVARSLPLNGGPSSDRDLLLTKANLQDRPAPPRSSLKTPTAKHRQ DLSSQPALLLRSWQVSDAPPLPAVYVEPHAGGTRLWIHAPAVAERLTIGNNLDLWLRDRAEALCLGEVWHPLLGQILSKA CSFKVGEINDAVSVALDISADGEVTNWHFSLSSIKPVAEIGPKTLTALSNRKPKARTVPAALKPVKDHLAQLETLIFCAR TLQMGEQASGSIELDLAVPELQCLGDLRWADPDSYHHQWALPLDQTDPQSVLSPMIRAAHRAWAQHAQNLQLPGLVIEAS EADNNTLNDVAKSALALDIALELDEEGRPAATELAKAFSTTACRRVLDQQLRHALPETLLRLGINDSQKENGNIESDHED TKTKDSNLQSPWCCPTIHYTDLVNQEIIVTLLSNGKDRPNVRQKEKVVLGSRECWQQIKWPLFSTSQAKNLEEICSKSLV HRLNTLRRQAEELRQDLIAMVQARIVEPLVGEEHQGVISGVQSYGFFVEIPPSMAEGLVHVSSLNDDWYEYRSRQNRLVG RKNRKIYQLGDQVNVKVVKVDALRNQIDLEVNGSAITVEANMNVNSDPTNQATTTKKSEVKGKITKNNEQLVSSSEA
Sequences:
>Translated_797_residues MKFTVADLLDQLPPTGGLEIKKLEKILKLTTKADRDGLETALQALLKLGIVNNEEAGAIKRSDDESLIEARLRCSSKGFC FALRDDGGDDIYIRDHQLNHAWNGDRVLVRITRDGGRRRSPEGGVQCILERSTTSLLGHVERKDQNILAIPLDDRILATI QLPDGDQAHLNDGEQTSVVEVKLDRYPIAQFPAEGHVARSLPLNGGPSSDRDLLLTKANLQDRPAPPRSSLKTPTAKHRQ DLSSQPALLLRSWQVSDAPPLPAVYVEPHAGGTRLWIHAPAVAERLTIGNNLDLWLRDRAEALCLGEVWHPLLGQILSKA CSFKVGEINDAVSVALDISADGEVTNWHFSLSSIKPVAEIGPKTLTALSNRKPKARTVPAALKPVKDHLAQLETLIFCAR TLQMGEQASGSIELDLAVPELQCLGDLRWADPDSYHHQWALPLDQTDPQSVLSPMIRAAHRAWAQHAQNLQLPGLVIEAS EADNNTLNDVAKSALALDIALELDEEGRPAATELAKAFSTTACRRVLDQQLRHALPETLLRLGINDSQKENGNIESDHED TKTKDSNLQSPWCCPTIHYTDLVNQEIIVTLLSNGKDRPNVRQKEKVVLGSRECWQQIKWPLFSTSQAKNLEEICSKSLV HRLNTLRRQAEELRQDLIAMVQARIVEPLVGEEHQGVISGVQSYGFFVEIPPSMAEGLVHVSSLNDDWYEYRSRQNRLVG RKNRKIYQLGDQVNVKVVKVDALRNQIDLEVNGSAITVEANMNVNSDPTNQATTTKKSEVKGKITKNNEQLVSSSEA >Mature_797_residues MKFTVADLLDQLPPTGGLEIKKLEKILKLTTKADRDGLETALQALLKLGIVNNEEAGAIKRSDDESLIEARLRCSSKGFC FALRDDGGDDIYIRDHQLNHAWNGDRVLVRITRDGGRRRSPEGGVQCILERSTTSLLGHVERKDQNILAIPLDDRILATI QLPDGDQAHLNDGEQTSVVEVKLDRYPIAQFPAEGHVARSLPLNGGPSSDRDLLLTKANLQDRPAPPRSSLKTPTAKHRQ DLSSQPALLLRSWQVSDAPPLPAVYVEPHAGGTRLWIHAPAVAERLTIGNNLDLWLRDRAEALCLGEVWHPLLGQILSKA CSFKVGEINDAVSVALDISADGEVTNWHFSLSSIKPVAEIGPKTLTALSNRKPKARTVPAALKPVKDHLAQLETLIFCAR TLQMGEQASGSIELDLAVPELQCLGDLRWADPDSYHHQWALPLDQTDPQSVLSPMIRAAHRAWAQHAQNLQLPGLVIEAS EADNNTLNDVAKSALALDIALELDEEGRPAATELAKAFSTTACRRVLDQQLRHALPETLLRLGINDSQKENGNIESDHED TKTKDSNLQSPWCCPTIHYTDLVNQEIIVTLLSNGKDRPNVRQKEKVVLGSRECWQQIKWPLFSTSQAKNLEEICSKSLV HRLNTLRRQAEELRQDLIAMVQARIVEPLVGEEHQGVISGVQSYGFFVEIPPSMAEGLVHVSSLNDDWYEYRSRQNRLVG RKNRKIYQLGDQVNVKVVKVDALRNQIDLEVNGSAITVEANMNVNSDPTNQATTTKKSEVKGKITKNNEQLVSSSEA
Specific function: Not known; control resistance to the carbonic anhydrase inhibitor acetazolamide [H]
COG id: COG0557
COG function: function code K; Exoribonuclease R
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 S1 motif domain [H]
Homologues:
Organism=Escherichia coli, GI87082383, Length=769, Percent_Identity=22.2366710013004, Blast_Score=100, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011129 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR003029 - InterPro: IPR022967 - InterPro: IPR013223 - InterPro: IPR001900 - InterPro: IPR022966 - InterPro: IPR011805 [H]
Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 88196; Mature: 88196
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTVADLLDQLPPTGGLEIKKLEKILKLTTKADRDGLETALQALLKLGIVNNEEAGAIK CCEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC RSDDESLIEARLRCSSKGFCFALRDDGGDDIYIRDHQLNHAWNGDRVLVRITRDGGRRRS CCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC PEGGVQCILERSTTSLLGHVERKDQNILAIPLDDRILATIQLPDGDQAHLNDGEQTSVVE CCCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEE VKLDRYPIAQFPAEGHVARSLPLNGGPSSDRDLLLTKANLQDRPAPPRSSLKTPTAKHRQ EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH DLSSQPALLLRSWQVSDAPPLPAVYVEPHAGGTRLWIHAPAVAERLTIGNNLDLWLRDRA CCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCEEECCCC EALCLGEVWHPLLGQILSKACSFKVGEINDAVSVALDISADGEVTNWHFSLSSIKPVAEI HHHHHHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHC GPKTLTALSNRKPKARTVPAALKPVKDHLAQLETLIFCARTLQMGEQASGSIELDLAVPE CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC LQCLGDLRWADPDSYHHQWALPLDQTDPQSVLSPMIRAAHRAWAQHAQNLQLPGLVIEAS HHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC EADNNTLNDVAKSALALDIALELDEEGRPAATELAKAFSTTACRRVLDQQLRHALPETLL CCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGINDSQKENGNIESDHEDTKTKDSNLQSPWCCPTIHYTDLVNQEIIVTLLSNGKDRPN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEEEEECCCCCCCC VRQKEKVVLGSRECWQQIKWPLFSTSQAKNLEEICSKSLVHRLNTLRRQAEELRQDLIAM CCHHHHHEECCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQARIVEPLVGEEHQGVISGVQSYGFFVEIPPSMAEGLVHVSSLNDDWYEYRSRQNRLVG HHHHHHHHHCCCCCHHHHHHHHHCCEEEEECHHHHHHEEEEECCCHHHHHHHHHHHCCCC RKNRKIYQLGDQVNVKVVKVDALRNQIDLEVNGSAITVEANMNVNSDPTNQATTTKKSEV CCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHC KGKITKNNEQLVSSSEA CCEEECCCHHHHCCCCC >Mature Secondary Structure MKFTVADLLDQLPPTGGLEIKKLEKILKLTTKADRDGLETALQALLKLGIVNNEEAGAIK CCEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC RSDDESLIEARLRCSSKGFCFALRDDGGDDIYIRDHQLNHAWNGDRVLVRITRDGGRRRS CCCHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCC PEGGVQCILERSTTSLLGHVERKDQNILAIPLDDRILATIQLPDGDQAHLNDGEQTSVVE CCCCCEEEEEHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEE VKLDRYPIAQFPAEGHVARSLPLNGGPSSDRDLLLTKANLQDRPAPPRSSLKTPTAKHRQ EEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHH DLSSQPALLLRSWQVSDAPPLPAVYVEPHAGGTRLWIHAPAVAERLTIGNNLDLWLRDRA CCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCCCCCEEECCCC EALCLGEVWHPLLGQILSKACSFKVGEINDAVSVALDISADGEVTNWHFSLSSIKPVAEI HHHHHHHHHHHHHHHHHHHHHCEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHC GPKTLTALSNRKPKARTVPAALKPVKDHLAQLETLIFCARTLQMGEQASGSIELDLAVPE CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC LQCLGDLRWADPDSYHHQWALPLDQTDPQSVLSPMIRAAHRAWAQHAQNLQLPGLVIEAS HHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC EADNNTLNDVAKSALALDIALELDEEGRPAATELAKAFSTTACRRVLDQQLRHALPETLL CCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGINDSQKENGNIESDHEDTKTKDSNLQSPWCCPTIHYTDLVNQEIIVTLLSNGKDRPN HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEEEEECCCCCCCC VRQKEKVVLGSRECWQQIKWPLFSTSQAKNLEEICSKSLVHRLNTLRRQAEELRQDLIAM CCHHHHHEECCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQARIVEPLVGEEHQGVISGVQSYGFFVEIPPSMAEGLVHVSSLNDDWYEYRSRQNRLVG HHHHHHHHHCCCCCHHHHHHHHHCCEEEEECHHHHHHEEEEECCCHHHHHHHHHHHCCCC RKNRKIYQLGDQVNVKVVKVDALRNQIDLEVNGSAITVEANMNVNSDPTNQATTTKKSEV CCCCEEEECCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHC KGKITKNNEQLVSSSEA CCEEECCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7727754; 8905231 [H]